RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 ZNF614Q8N883 585 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 FHDC1Q9C0D6 1143 aaPredicted RBP12.6□□□□□ -0.39
CLCN4-203ENST00000421085 XPNPEP3Q9NQH7 507 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 SH3BP1Q9Y3L3 701 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 CSDE1O75534 798 aaKnown RBP12.6□□□□□ -0.39
CLCN4-203ENST00000421085 SREBF1P36956 1147 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 PTPN11Q06124 597 aaPredicted RBP12.6□□□□□ -0.39
CLCN4-203ENST00000421085 WDR49Q8IV35 697 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 ACTL7BQ9Y614 415 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 NEK3P51956 506 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 DDI2Q5TDH0 399 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 MBD2Q9UBB5 411 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 PSMD12O00232 456 aaPredicted RBP12.6□□□□□ -0.39
CLCN4-203ENST00000421085 SEC23AQ15436 765 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 HHIPL2Q6UWX4 724 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 KIAA0408Q6ZU52 694 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 POLNQ7Z5Q5 900 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 MRPL48Q96GC5 212 aaKnown RBP12.6□□□□□ -0.39
CLCN4-203ENST00000421085 TBC1D13Q9NVG8 400 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 SH3BP4Q9P0V3 963 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 MKL2Q9ULH7 1088 aa12.6□□□□□ -0.39
CLCN4-203ENST00000421085 SPATA31A3Q5VYP0 1347 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 ENTPD3O75355 529 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 CCNA2P20248 432 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 ADSSP30520 456 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 STRIP1Q5VSL9 837 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 FBXO30Q8TB52 745 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 ZNF606Q8WXB4 792 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 VAV3Q9UKW4 847 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 DMTF1Q9Y222 760 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 ATF5Q9Y2D1 282 aaPredicted RBP12.59□□□□□ -0.39
CLCN4-203ENST00000421085 ATXN2Q99700 1313 aaKnown RBP12.59□□□□□ -0.39
CLCN4-203ENST00000421085 CD3EAPO15446 510 aaKnown RBP12.59□□□□□ -0.39
CLCN4-203ENST00000421085 SEC22BO75396 215 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 ANXA6P08133 673 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 MZT2BQ6NZ67 158 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 XRRA1Q6P2D8 792 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 ZNF398Q8TD17 642 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 ADPRHL2Q9NX46 363 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 CCDC182A6NF36 153 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 A8MUI8 341 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 VPS4BO75351 444 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 CDH18Q13634 790 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 RNF220Q5VTB9 566 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 ZNF470Q6ECI4 717 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 ULK2Q8IYT8 1036 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 CELF6Q96J87 481 aaKnown RBP12.59□□□□□ -0.39
CLCN4-203ENST00000421085 UBA2Q9UBT2 640 aaPredicted RBP12.59□□□□□ -0.39
CLCN4-203ENST00000421085 INVSQ9Y283 1065 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 SIK3Q9Y2K2 1263 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 RCCD1A6NED2 376 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 WFS1O76024 890 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 VAPBO95292 243 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 GJB6O95452 261 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 ZNF37AP17032 561 aaPredicted RBP12.59□□□□□ -0.39
CLCN4-203ENST00000421085 CAMK2GQ13555 558 aaPredicted RBP12.59□□□□□ -0.39
CLCN4-203ENST00000421085 FGD3Q5JSP0 725 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 SMIM5Q71RC9 77 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 ALYREFQ86V81 257 aaKnown RBP12.59□□□□□ -0.39
CLCN4-203ENST00000421085 TMEM132CQ8N3T6 1108 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 SLITRK1Q96PX8 696 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 AP4B1Q9Y6B7 739 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 IQSEC2Q5JU85 1478 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 BTN3A3O00478 584 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 PRRG1O14668 218 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 NCAM2O15394 837 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 ASS1P00966 412 aaKnown RBP12.59□□□□□ -0.39
CLCN4-203ENST00000421085 VAV1P15498 845 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 OR1G1P47890 313 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 STX4Q12846 297 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 TIMM50Q3ZCQ8 353 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 TDRD10Q5VZ19 366 aaKnown RBP12.59□□□□□ -0.39
CLCN4-203ENST00000421085 IKBIPQ70UQ0 350 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 ADHFE1Q8IWW8 467 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 HPS1Q92902 700 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 SLC35C1Q96A29 364 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 MBOAT7Q96N66 472 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 TRPC4Q9UBN4 977 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 CDH9Q9ULB4 789 aa12.59□□□□□ -0.39
CLCN4-203ENST00000421085 IQGAP3Q86VI3 1631 aa12.58□□□□□ -0.39
CLCN4-203ENST00000421085 F5H5T6 163 aa12.58□□□□□ -0.39
CLCN4-203ENST00000421085 KRT6AP02538 564 aa12.58□□□□□ -0.39
CLCN4-203ENST00000421085 CYP2C9P11712 490 aa12.58□□□□□ -0.39
CLCN4-203ENST00000421085 SPIRE1Q08AE8 756 aa12.58□□□□□ -0.39
CLCN4-203ENST00000421085 CWF19L1Q69YN2 538 aaKnown RBP12.58□□□□□ -0.39
CLCN4-203ENST00000421085 ILDR2Q71H61 639 aa12.58□□□□□ -0.39
CLCN4-203ENST00000421085 TEKT5Q96M29 485 aa12.58□□□□□ -0.39
CLCN4-203ENST00000421085 AGXT2Q9BYV1 514 aa12.58□□□□□ -0.39
CLCN4-203ENST00000421085 PNPLA3Q9NST1 481 aa12.58□□□□□ -0.39
CLCN4-203ENST00000421085 PCYOX1Q9UHG3 505 aa12.58□□□□□ -0.39
CLCN4-203ENST00000421085 ENOPH1Q9UHY7 261 aa12.58□□□□□ -0.39
CLCN4-203ENST00000421085 GPR75-ASB3A0A0A6YYF3 556 aa12.58□□□□□ -0.4
CLCN4-203ENST00000421085 SPTLC1O15269 473 aa12.58□□□□□ -0.4
CLCN4-203ENST00000421085 ERVK-10P10266 1014 aa12.58□□□□□ -0.4
CLCN4-203ENST00000421085 DBTP11182 482 aaKnown RBP12.58□□□□□ -0.4
CLCN4-203ENST00000421085 ODC1P11926 461 aa12.58□□□□□ -0.4
CLCN4-203ENST00000421085 ITGAXP20702 1163 aa12.58□□□□□ -0.4
CLCN4-203ENST00000421085 CHKAP35790 457 aa12.58□□□□□ -0.4
CLCN4-203ENST00000421085 RNF19BQ6ZMZ0 732 aa12.58□□□□□ -0.4
CLCN4-203ENST00000421085 MIB1Q86YT6 1006 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms