RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 SIN3BO75182 1162 aa17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 LTFP02788 710 aa17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 PAEPP09466 180 aa17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 CSKP41240 450 aa17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 PRCPP42785 496 aa17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 RGS7P49802 495 aa17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 GALCP54803 685 aa17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 FKBP3Q00688 224 aaKnown RBP17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 IL9RQ01113 521 aa17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 ARID5BQ14865 1188 aa17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 CNGA2Q16280 664 aa17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 CCDC157Q569K6 752 aa17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 NADSYN1Q6IA69 706 aa17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 PMF1Q6P1K2 205 aa17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 DHRS13Q6UX07 377 aa17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 TMPRSS12Q86WS5 348 aa17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 SCUBE3Q8IX30 993 aa17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 KDM1BQ8NB78 822 aa17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 SKA1Q96BD8 255 aa17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 CCDC34Q96HJ3 373 aa17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 TSG101Q99816 390 aa17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 SCAND2PQ9GZW5 306 aaPredicted RBP17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 INTS6Q9UL03 887 aaKnown RBP17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 ZDHHC9Q9Y397 364 aa17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 A0A087WV48 116 aa17.49■□□□□ 0.39
UPF3AP3-201ENST00000420996 TYW5A2RUC4 315 aaKnown RBP17.49■□□□□ 0.39
UPF3AP3-201ENST00000420996 FAM47DPA6NHR8 397 aa17.49■□□□□ 0.39
UPF3AP3-201ENST00000420996 LRMPQ12912 555 aa17.49■□□□□ 0.39
UPF3AP3-201ENST00000420996 CST6Q15828 149 aa17.49■□□□□ 0.39
UPF3AP3-201ENST00000420996 COBLL1Q53SF7 1204 aa17.49■□□□□ 0.39
UPF3AP3-201ENST00000420996 NCEH1Q6PIU2 408 aa17.49■□□□□ 0.39
UPF3AP3-201ENST00000420996 TMEM270Q6UE05 265 aa17.49■□□□□ 0.39
UPF3AP3-201ENST00000420996 SLC35C1Q96A29 364 aa17.49■□□□□ 0.39
UPF3AP3-201ENST00000420996 MRGPRX3Q96LB0 322 aa17.49■□□□□ 0.39
UPF3AP3-201ENST00000420996 HSFY1Q96LI6 401 aa17.49■□□□□ 0.39
UPF3AP3-201ENST00000420996 PRICKLE1Q96MT3 831 aaPredicted RBP17.49■□□□□ 0.39
UPF3AP3-201ENST00000420996 SLC6A18Q96N87 628 aa17.49■□□□□ 0.39
UPF3AP3-201ENST00000420996 NEUROG2Q9H2A3 272 aa17.49■□□□□ 0.39
UPF3AP3-201ENST00000420996 RMND1Q9NWS8 449 aa17.49■□□□□ 0.39
UPF3AP3-201ENST00000420996 SERGEFQ9UGK8 458 aa17.49■□□□□ 0.39
UPF3AP3-201ENST00000420996 ARMCX3Q9UH62 379 aaPredicted RBP17.49■□□□□ 0.39
UPF3AP3-201ENST00000420996 ADAMTS1Q9UHI8 967 aa17.49■□□□□ 0.39
UPF3AP3-201ENST00000420996 PCDHGA1Q9Y5H4 931 aa17.49■□□□□ 0.39
UPF3AP3-201ENST00000420996 TARSL2A2RTX5 802 aaKnown RBP17.48■□□□□ 0.39
UPF3AP3-201ENST00000420996 LRRC72A6NJI9 287 aa17.48■□□□□ 0.39
UPF3AP3-201ENST00000420996 PIK3R2O00459 728 aa17.48■□□□□ 0.39
UPF3AP3-201ENST00000420996 MID1O15344 667 aa17.48■□□□□ 0.39
UPF3AP3-201ENST00000420996 FBXO21O94952 628 aa17.48■□□□□ 0.39
UPF3AP3-201ENST00000420996 RPS24P62847 133 aaKnown RBP17.48■□□□□ 0.39
UPF3AP3-201ENST00000420996 STILQ15468 1287 aa17.48■□□□□ 0.39
UPF3AP3-201ENST00000420996 C9orf64Q5T6V5 341 aa17.48■□□□□ 0.39
UPF3AP3-201ENST00000420996 ANKRD40Q6AI12 368 aa17.48■□□□□ 0.39
UPF3AP3-201ENST00000420996 DHX40Q8IX18 779 aaKnown RBP17.48■□□□□ 0.39
UPF3AP3-201ENST00000420996 OR2T34Q8NGX1 318 aa17.48■□□□□ 0.39
UPF3AP3-201ENST00000420996 CLEC4CQ8WTT0 213 aa17.48■□□□□ 0.39
UPF3AP3-201ENST00000420996 FCRL2Q96LA5 508 aaPredicted RBP17.48■□□□□ 0.39
UPF3AP3-201ENST00000420996 ELF4Q99607 663 aaPredicted RBP17.48■□□□□ 0.39
UPF3AP3-201ENST00000420996 EBF2Q9HAK2 575 aa17.48■□□□□ 0.39
UPF3AP3-201ENST00000420996 FZD4Q9ULV1 537 aa17.48■□□□□ 0.39
UPF3AP3-201ENST00000420996 ERVW-1Q9UQF0 538 aa17.48■□□□□ 0.39
UPF3AP3-201ENST00000420996 LAMA5O15230 3695 aa17.48■□□□□ 0.39
UPF3AP3-201ENST00000420996 KNTC1P50748 2209 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 A0A1W2PP55 124 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 C10orf142B7Z368 130 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 M0QYV0 167 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 RNASEH2AO75792 299 aaKnown RBP17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 WNT1P04628 370 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 SRPRAP08240 638 aaKnown RBP17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 CDK4P11802 303 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 CD38P28907 300 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 SLC8A1P32418 973 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 CCR5P51681 352 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 PMS1P54277 932 aaKnown RBP17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 NNTQ13423 1086 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 PNOCQ13519 176 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 CDH18Q13634 790 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 KCNJ12Q14500 433 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 PITRM1Q5JRX3 1037 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 PRAMEF14Q5SWL7 426 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 ZNF658Q5TYW1 1059 aaPredicted RBP17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 GATAD2AQ86YP4 633 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 MMAAQ8IVH4 418 aaKnown RBP17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 CCDC117Q8IWD4 279 aaPredicted RBP17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 CARNMT1Q8N4J0 409 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 MYEOVQ96EZ4 313 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 SERPINB11Q96P15 392 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 NT5C1BQ96P26 610 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 BBC3Q96PG8 261 aaPredicted RBP17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 OMDQ99983 421 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 ZSWIM1Q9BR11 485 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 AASDHPPTQ9NRN7 309 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 TLR6Q9Y2C9 796 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 PCDHB4Q9Y5E5 795 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 ATP6V1DQ9Y5K8 247 aa17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 NYNRINQ9P2P1 1898 aaKnown RBP17.47■□□□□ 0.39
UPF3AP3-201ENST00000420996 EDDM13A0A1B0GTR0 161 aa17.46■□□□□ 0.39
UPF3AP3-201ENST00000420996 TTC34A8MYJ7 566 aa17.46■□□□□ 0.39
UPF3AP3-201ENST00000420996 RNF225M0QZC1 329 aaPredicted RBP17.46■□□□□ 0.39
UPF3AP3-201ENST00000420996 ENC1O14682 589 aa17.46■□□□□ 0.39
UPF3AP3-201ENST00000420996 PMM2O15305 246 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms