RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 DENND4CQ5VZ89 1909 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 USP34Q70CQ2 3546 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 TRAV20A0A0B4J274 112 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 HEPACAM2A8MVW5 462 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 F8VP50 259 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 CLDN5O00501 218 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 PI15O43692 258 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 STX10O60499 249 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 TGFB1P01137 390 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 PSMC3P17980 439 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 DDX6P26196 483 aaKnown RBP eCLIP7.33□□□□□ -1.241e-5■■■□□ 17.8
HMGN1-205ENST00000419378 ANXA13P27216 316 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 GDI1P31150 447 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 L1CAMP32004 1257 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 GRIK1P39086 918 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 CLCN5P51795 746 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 CLCN7P51798 805 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 NDST1P52848 882 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 PRKCQQ04759 706 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 INCA1Q0VD86 236 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 MLF2Q15773 248 aaPredicted RBP7.33□□□□□ -1.24
HMGN1-205ENST00000419378 IFI16Q16666 785 aaKnown RBP7.33□□□□□ -1.24
HMGN1-205ENST00000419378 LONRF2Q1L5Z9 754 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 DPY19L1Q2PZI1 675 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 FAM209AQ5JX71 171 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 EGFLAMQ63HQ2 1017 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 GTF2IRD2BQ6EKJ0 949 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 KLHL10Q6JEL2 608 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 TTI2Q6NXR4 508 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 FOXR2Q6PJQ5 311 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 CRTC3Q6UUV7 619 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 DENND5BQ6ZUT9 1274 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 GTF2IRD2Q86UP8 949 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 TSPYL5Q86VY4 417 aaPredicted RBP7.33□□□□□ -1.24
HMGN1-205ENST00000419378 ARID3BQ8IVW6 561 aaPredicted RBP7.33□□□□□ -1.24
HMGN1-205ENST00000419378 MFSD6LQ8IWD5 586 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 ZNF655Q8N720 491 aaPredicted RBP7.33□□□□□ -1.24
HMGN1-205ENST00000419378 CCDC150Q8NCX0 1101 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 NELFBQ8WX92 580 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 SEMA4DQ92854 862 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 DNASE1L2Q92874 299 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 UBE2FQ969M7 185 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 E2F7Q96AV8 911 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 TCTN2Q96GX1 697 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 TNIP3Q96KP6 325 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 SPATA17Q96L03 361 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 CEP295NLQ96MC4 621 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 CDC6Q99741 560 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 TRMT61BQ9BVS5 477 aaKnown RBP7.33□□□□□ -1.24
HMGN1-205ENST00000419378 SLC46A2Q9BY10 475 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 B3GNT5Q9BYG0 378 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 ELOVL4Q9GZR5 314 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 TASP1Q9H6P5 420 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 BRD9Q9H8M2 597 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 TMEM30AQ9NV96 361 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 UXTQ9UBK9 157 aaPredicted RBP7.33□□□□□ -1.24
HMGN1-205ENST00000419378 ARMCX3Q9UH62 379 aaPredicted RBP7.33□□□□□ -1.24
HMGN1-205ENST00000419378 CTNND2Q9UQB3 1225 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 TICRRQ7Z2Z1 1910 aa7.33□□□□□ -1.24
HMGN1-205ENST00000419378 KIF26AQ9ULI4 1882 aaPredicted RBP7.32□□□□□ -1.24
HMGN1-205ENST00000419378 F5P12259 2224 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 PIEZO1Q92508 2521 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 BICDL2A1A5D9 508 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 ARNTLO00327 626 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 ZNF263O14978 683 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 PRODHO43272 600 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 CAPNS1P04632 268 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 GSNP06396 782 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 CCDC130P13994 396 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 CD58P19256 250 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 TPP2P29144 1249 aaPredicted RBP7.32□□□□□ -1.24
HMGN1-205ENST00000419378 AVPR1AP37288 418 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 PLA2G5P39877 138 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 STARD6P59095 220 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 FCHO2Q0JRZ9 810 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 TCF15Q12870 199 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 PAK1Q13153 545 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 CAMK4Q16566 473 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 CBWD6Q4V339 395 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 SLC44A4Q53GD3 710 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 CBWD3Q5JTY5 395 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 CBWD5Q5RIA9 395 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 TCERG1LQ5VWI1 586 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 TXNDC8Q6A555 127 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 CLEC17AQ6ZS10 378 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 ZNF662Q6ZS27 426 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 TPRG1Q6ZUI0 275 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 PAQR9Q6ZVX9 377 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 ACOT1Q86TX2 421 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 MON1AQ86VX9 555 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 UNC93AQ86WB7 457 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 YAF2Q8IY57 180 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 CCDC105Q8IYK2 499 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 CMTM8Q8IZV2 173 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 FUKQ8N0W3 1084 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 MAB21L3Q8N8X9 362 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 TRIML1Q8N9V2 468 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 FBXL13Q8NEE6 735 aa7.32□□□□□ -1.24
HMGN1-205ENST00000419378 MRPS31Q92665 395 aaKnown RBP7.32□□□□□ -1.24
HMGN1-205ENST00000419378 SLC35C1Q96A29 364 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms