RNA–Protein interactions for RNA: ENST00000418674.1

PTPRC-207, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-207ENST00000418674 FAR2Q96K12 515 aa3.25□□□□□ -1.89
PTPRC-207ENST00000418674 LENG8Q96PV6 779 aaPredicted RBP3.25□□□□□ -1.89
PTPRC-207ENST00000418674 SENP7Q9BQF6 1050 aa3.25□□□□□ -1.89
PTPRC-207ENST00000418674 SH2D3AQ9BRG2 576 aa3.25□□□□□ -1.89
PTPRC-207ENST00000418674 THAP7Q9BT49 309 aaPredicted RBP3.25□□□□□ -1.89
PTPRC-207ENST00000418674 QTRT1Q9BXR0 403 aaKnown RBP3.25□□□□□ -1.89
PTPRC-207ENST00000418674 SLC26A6Q9BXS9 759 aa3.25□□□□□ -1.89
PTPRC-207ENST00000418674 TMLHEQ9NVH6 421 aa3.25□□□□□ -1.89
PTPRC-207ENST00000418674 TFCP2L1Q9NZI6 479 aa3.25□□□□□ -1.89
PTPRC-207ENST00000418674 MGAT4CQ9UBM8 478 aa3.25□□□□□ -1.89
PTPRC-207ENST00000418674 FBXO9Q9UK97 447 aaPredicted RBP3.25□□□□□ -1.89
PTPRC-207ENST00000418674 AMFRQ9UKV5 643 aa3.25□□□□□ -1.89
PTPRC-207ENST00000418674 BTBD3Q9Y2F9 522 aa3.25□□□□□ -1.89
PTPRC-207ENST00000418674 DNAJC16Q9Y2G8 782 aa3.25□□□□□ -1.89
PTPRC-207ENST00000418674 RRP7AQ9Y3A4 280 aaKnown RBP3.25□□□□□ -1.89
PTPRC-207ENST00000418674 STX16-NPEPL1H3BU86 382 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 CES2O00748 559 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 STX16O14662 325 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 PDE8BO95263 885 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 MBPP02686 304 aaPredicted RBP3.24□□□□□ -1.89
PTPRC-207ENST00000418674 CYP3A4P08684 503 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 CHRM5P08912 532 aaPredicted RBP3.24□□□□□ -1.89
PTPRC-207ENST00000418674 MYCLP12524 364 aaPredicted RBP3.24□□□□□ -1.89
PTPRC-207ENST00000418674 IGHMBP2P38935 993 aaKnown RBP3.24□□□□□ -1.89
PTPRC-207ENST00000418674 MMP13P45452 471 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 NR1H2P55055 460 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 GEMIN4P57678 1058 aaKnown RBP3.24□□□□□ -1.89
PTPRC-207ENST00000418674 RBM6P78332 1123 aaKnown RBP3.24□□□□□ -1.89
PTPRC-207ENST00000418674 TXNL4AP83876 142 aaKnown RBP3.24□□□□□ -1.89
PTPRC-207ENST00000418674 TLE3Q04726 772 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 MAPK7Q13164 816 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 KLF9Q13886 244 aaPredicted RBP3.24□□□□□ -1.89
PTPRC-207ENST00000418674 ANKRD1Q15327 319 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 ETFDHQ16134 617 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 SUPT20HL1Q3ZLR7 823 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 CTXN3Q4LDR2 81 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 ZNF484Q5JVG2 852 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 ANKRD40Q6AI12 368 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 C11orf87Q6NUJ2 197 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 MIS18BP1Q6P0N0 1132 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 MAATS1Q7Z4T9 603 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 CNGA4Q8IV77 575 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 SFTPA1Q8IWL2 248 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 PTGR2Q8N8N7 351 aaPredicted RBP3.24□□□□□ -1.89
PTPRC-207ENST00000418674 C8orf58Q8NAV2 365 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 NGDNQ8NEJ9 315 aaKnown RBP3.24□□□□□ -1.89
PTPRC-207ENST00000418674 GLMPQ8WWB7 406 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 HVCN1Q96D96 273 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 TRMT61AQ96FX7 289 aaKnown RBP3.24□□□□□ -1.89
PTPRC-207ENST00000418674 RITA1Q96K30 269 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 C5orf34Q96MH7 638 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 SNX18Q96RF0 628 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 REEP2Q9BRK0 252 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 GPR63Q9BZJ6 419 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 CIPCQ9C0C6 399 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 TMX4Q9H1E5 349 aaPredicted RBP3.24□□□□□ -1.89
PTPRC-207ENST00000418674 ZHX3Q9H4I2 956 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 CDCP1Q9H5V8 836 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 PLEKHA2Q9HB19 425 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 SNX15Q9NRS6 342 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 BAG5Q9UL15 447 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 RAB21Q9UL25 225 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 TRPC5Q9UL62 973 aaPredicted RBP3.24□□□□□ -1.89
PTPRC-207ENST00000418674 RCE1Q9Y256 329 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 PCDHB2Q9Y5E7 798 aa3.24□□□□□ -1.89
PTPRC-207ENST00000418674 CCDC196A0A1B0GTZ2 297 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 SMIM35A0A1B0GVV1 85 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 VWA3AA6NCI4 1184 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 SAC3D1A6NKF1 404 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 KCNU1A8MYU2 1149 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 TP73O15350 636 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 SEPT4O43236 478 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 HNRNPRO43390 633 aaKnown RBP3.23□□□□□ -1.89
PTPRC-207ENST00000418674 TSPAN3O60637 253 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 PRAMEF2O60811 474 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 MBD4O95243 580 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 BMP15O95972 392 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 CD4P01730 458 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 CSF1P09603 554 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 TMIGD3P0DMS9 266 aaPredicted RBP3.23□□□□□ -1.89
PTPRC-207ENST00000418674 MATN1P21941 496 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 BDNFP23560 247 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 ELF1P32519 619 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 ARHGAP25P42331 645 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 RXRGP48443 463 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 RGS19P49795 217 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 FOXL2P58012 376 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 GPC5P78333 572 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 RNASELQ05823 741 aaKnown RBP3.23□□□□□ -1.89
PTPRC-207ENST00000418674 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.23□□□□□ -1.89
PTPRC-207ENST00000418674 CCDC15Q0P6D6 951 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 LMAN2Q12907 356 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 CBFBQ13951 182 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 RNASE12Q5GAN4 147 aaKnown RBP3.23□□□□□ -1.89
PTPRC-207ENST00000418674 ATG16L1Q676U5 607 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 DENND2CQ68D51 928 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 SLC2A7Q6PXP3 512 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 C1orf122Q6ZSJ8 110 aa3.23□□□□□ -1.89
PTPRC-207ENST00000418674 RSRC2Q7L4I2 434 aaKnown RBP3.23□□□□□ -1.89
PTPRC-207ENST00000418674 PCGF5Q86SE9 256 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms