RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 CCDC33Q8N5R6 958 aa21.39■■□□□ 1.02
CASC3-203ENST00000418132 SLC22A17Q8WUG5 538 aa21.39■■□□□ 1.02
CASC3-203ENST00000418132 PLD4Q96BZ4 506 aa21.39■■□□□ 1.02
CASC3-203ENST00000418132 KLF16Q9BXK1 252 aaPredicted RBP21.39■■□□□ 1.02
CASC3-203ENST00000418132 KLC2Q9H0B6 622 aa21.39■■□□□ 1.02
CASC3-203ENST00000418132 PPARGC1AQ9UBK2 798 aaKnown RBP21.39■■□□□ 1.02
CASC3-203ENST00000418132 HPCAL4Q9UM19 191 aa21.39■■□□□ 1.02
CASC3-203ENST00000418132 WASH4PA8MWX3 477 aa21.39■■□□□ 1.01
CASC3-203ENST00000418132 PPP1R12AO14974 1030 aaPredicted RBP21.39■■□□□ 1.01
CASC3-203ENST00000418132 PRKD1Q15139 912 aaPredicted RBP21.39■■□□□ 1.01
CASC3-203ENST00000418132 TP53INP2Q8IXH6 220 aa21.39■■□□□ 1.01
CASC3-203ENST00000418132 HS6ST3Q8IZP7 471 aa21.39■■□□□ 1.01
CASC3-203ENST00000418132 MREGQ8N565 214 aa21.39■■□□□ 1.01
CASC3-203ENST00000418132 LRRN4Q8WUT4 740 aa21.39■■□□□ 1.01
CASC3-203ENST00000418132 LGMNQ99538 433 aa21.39■■□□□ 1.01
CASC3-203ENST00000418132 ACBD3Q9H3P7 528 aa21.39■■□□□ 1.01
CASC3-203ENST00000418132 PRDM12Q9H4Q4 367 aa21.39■■□□□ 1.01
CASC3-203ENST00000418132 MAN1C1Q9NR34 630 aa21.39■■□□□ 1.01
CASC3-203ENST00000418132 MTRF1LQ9UGC7 380 aaKnown RBP21.39■■□□□ 1.01
CASC3-203ENST00000418132 ANAPC5Q9UJX4 755 aa21.39■■□□□ 1.01
CASC3-203ENST00000418132 VANGL2Q9ULK5 521 aa21.39■■□□□ 1.01
CASC3-203ENST00000418132 CLUHO75153 1309 aa21.38■■□□□ 1.01
CASC3-203ENST00000418132 HOXA9P31269 272 aa21.38■■□□□ 1.01
CASC3-203ENST00000418132 NRLP54845 237 aa21.38■■□□□ 1.01
CASC3-203ENST00000418132 NADSYN1Q6IA69 706 aa21.38■■□□□ 1.01
CASC3-203ENST00000418132 HIBCHQ6NVY1 386 aaPredicted RBP21.38■■□□□ 1.01
CASC3-203ENST00000418132 LRRC31Q6UY01 552 aa21.38■■□□□ 1.01
CASC3-203ENST00000418132 LZTR1Q8N653 840 aa21.38■■□□□ 1.01
CASC3-203ENST00000418132 NETO2Q8NC67 525 aa21.38■■□□□ 1.01
CASC3-203ENST00000418132 AZIN2Q96A70 460 aa21.38■■□□□ 1.01
CASC3-203ENST00000418132 TPX2Q9ULW0 747 aaKnown RBP21.38■■□□□ 1.01
CASC3-203ENST00000418132 DOCK4Q8N1I0 1966 aa21.38■■□□□ 1.01
CASC3-203ENST00000418132 CCL16O15467 120 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 STC2O76061 302 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 EPCAMP16422 314 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 HARS2P49590 506 aaKnown RBP21.37■■□□□ 1.01
CASC3-203ENST00000418132 GALNT2Q10471 571 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 RAB30Q15771 203 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 RAP1GAP2Q684P5 730 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 HEATR6Q6AI08 1181 aaKnown RBP21.37■■□□□ 1.01
CASC3-203ENST00000418132 FBXL22Q6P050 247 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 RTL3Q8N8U3 475 aaKnown RBP21.37■■□□□ 1.01
CASC3-203ENST00000418132 MRPS31Q92665 395 aaKnown RBP21.37■■□□□ 1.01
CASC3-203ENST00000418132 BRD8Q9H0E9 1235 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 NKX2-4Q9H2Z4 354 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 GKN1Q9NS71 199 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 MSRAQ9UJ68 235 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.37■■□□□ 1.01
CASC3-203ENST00000418132 NDC80O14777 642 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 ACSL4O60488 711 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 ZNF189O75820 626 aaPredicted RBP21.37■■□□□ 1.01
CASC3-203ENST00000418132 VAV1P15498 845 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 MX2P20592 715 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 CDC25CP30307 473 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 HSPA9P38646 679 aaKnown RBP21.37■■□□□ 1.01
CASC3-203ENST00000418132 TXNDC8Q6A555 127 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 NLRP14Q86W24 1093 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 HTR3CQ8WXA8 447 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 ZFRQ96KR1 1074 aaKnown RBP21.37■■□□□ 1.01
CASC3-203ENST00000418132 SLC22A12Q96S37 553 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 ZYG11BQ9C0D3 744 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 CERS4Q9HA82 394 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 ASAH2Q9NR71 780 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 MPP6Q9NZW5 540 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 PAK5Q9P286 719 aa21.37■■□□□ 1.01
CASC3-203ENST00000418132 C5orf60A6NFR6 353 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 DRGXA6NNA5 263 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 GCATO75600 419 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 RHOQP17081 205 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 ACTN2P35609 894 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 EPHA5P54756 1037 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 RNASEH2BQ5TBB1 312 aaKnown RBP21.36■■□□□ 1.01
CASC3-203ENST00000418132 TMC3Q7Z5M5 1100 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 CHSY1Q86X52 802 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 HDAC11Q96DB2 347 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 CYP2S1Q96SQ9 504 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 CORO1BQ9BR76 489 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 TXLNGYQ9BZA5 131 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 LMAN2LQ9H0V9 348 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 TRPC7Q9HCX4 862 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 NUP205Q92621 2012 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 RFPL2O75678 378 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 KLKB1P03952 638 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 HNRNPA1P09651 372 aaKnown RBP eCLIP21.36■■□□□ 1.01
CASC3-203ENST00000418132 MBL2P11226 248 aaPredicted RBP21.36■■□□□ 1.01
CASC3-203ENST00000418132 TACR2P21452 398 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 SLC11A2P49281 568 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 PPIDQ08752 370 aaKnown RBP21.36■■□□□ 1.01
CASC3-203ENST00000418132 MORF4L2Q15014 288 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 C5orf22Q49AR2 442 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 PPP2R2DQ66LE6 453 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 C4orf22Q6V702 233 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 PCGF5Q86SE9 256 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 ARHGAP12Q8IWW6 846 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 ARL14EPQ8N8R7 260 aaPredicted RBP21.36■■□□□ 1.01
CASC3-203ENST00000418132 TSEN2Q8NCE0 465 aaKnown RBP21.36■■□□□ 1.01
CASC3-203ENST00000418132 CCNYQ8ND76 341 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 IGSF8Q969P0 613 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 P2RY11Q96G91 374 aa21.36■■□□□ 1.01
CASC3-203ENST00000418132 TMEM248Q9NWD8 314 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms