RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 YWHAGP61981 247 aaKnown RBP eCLIP13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 DYNLT1P63172 113 aa13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 DR1Q01658 176 aa13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 SATB1Q01826 763 aa13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 TWF1Q12792 350 aa13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 DHX34Q14147 1143 aaKnown RBP13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 PPP2R5DQ14738 602 aa13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 PPP6R3Q5H9R7 873 aaPredicted RBP13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 FBXO38Q6PIJ6 1188 aa13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 CCDC137Q6PK04 289 aaKnown RBP13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 TMCO3Q6UWJ1 677 aa13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 MAMSTRQ6ZN01 415 aa13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 FAM131BQ86XD5 332 aa13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 ELMOD1Q8N336 334 aa13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 ARHGAP18Q8N392 663 aa13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 TTC9BQ8N6N2 239 aa13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 CELF5Q8N6W0 485 aaKnown RBP13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 RNF139Q8WU17 664 aa13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 IFT81Q8WYA0 676 aa13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 FBXO32Q969P5 355 aa13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 NPY6RQ99463 290 aa13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 IER2Q9BTL4 223 aa13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 EPB41L5Q9HCM4 733 aa13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 ABCC13Q9NSE7 274 aa13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 DMGDHQ9UI17 866 aaKnown RBP13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 UTP11Q9Y3A2 253 aaKnown RBP13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 USP3Q9Y6I4 520 aa13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 MAP1BP46821 2468 aaKnown RBP13.63□□□□□ -0.23
HLA-DMB-258ENST00000418107 GREB1Q4ZG55 1949 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 TICRRQ7Z2Z1 1910 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 A0A1W2PQH9 124 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 FAM187AA6NFU0 413 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 TNFRSF10BO14763 440 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 TTI1O43156 1089 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 SOAT2O75908 522 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 F9P00740 461 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 TUFMP49411 452 aaKnown RBP13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 VSNL1P62760 191 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 DMWDQ09019 674 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 TFDP2Q14188 446 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 GAS6Q14393 721 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 PPP1R7Q15435 360 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 TAF12Q16514 161 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 ARL13BQ3SXY8 428 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 MAP9Q49MG5 647 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 ZC3H12AQ5D1E8 599 aaKnown RBP13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 TPGS2Q68CL5 300 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 WDR93Q6P2C0 686 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 DENND5BQ6ZUT9 1274 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 STKLD1Q8NE28 680 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 ZSCAN18Q8TBC5 510 aaPredicted RBP13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 ADAM32Q8TC27 787 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 GIPC2Q8TF65 315 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 GRK7Q8WTQ7 553 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 DEPDC1BQ8WUY9 529 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 HAUS1Q96CS2 278 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 CCDC114Q96M63 670 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 ZNF512Q96ME7 567 aaPredicted RBP13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 HERPUD2Q9BSE4 406 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 DCLK3Q9C098 648 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 RAB17Q9H0T7 212 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 TRPV5Q9NQA5 729 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 DDIT4Q9NX09 232 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 FEZ2Q9UHY8 353 aaPredicted RBP13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 RAB21Q9UL25 225 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 AP4E1Q9UPM8 1137 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 SCML2Q9UQR0 700 aa13.62□□□□□ -0.23
HLA-DMB-258ENST00000418107 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 CCDC151A5D8V7 595 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 C3orf70A6NLC5 250 aaPredicted RBP13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 MDM4O15151 490 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 CST8O60676 142 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 FYNP06241 537 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 RETP07949 1114 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 ADRB1P08588 477 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 CD48P09326 243 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 CHRNB1P11230 501 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 H2AFXP16104 143 aaPredicted RBP13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 ARL4AP40617 200 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 KCNJ1P48048 391 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 CXCL12P48061 93 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 FNTAP49354 379 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 PITX1P78337 314 aaPredicted RBP13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 MMRN1Q13201 1228 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 SRSF5Q13243 272 aaKnown RBP13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 SIM2Q14190 667 aaPredicted RBP13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 DPYSL3Q14195 570 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 SIX1Q15475 284 aaPredicted RBP13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 TEAD2Q15562 447 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 CCNG2Q16589 344 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 CYP1B1Q16678 543 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 PPM1JQ5JR12 505 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 EFHC2Q5JST6 749 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 GSTA5Q7RTV2 222 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 ANKS1BQ7Z6G8 1248 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 MON1AQ86VX9 555 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 CCDC185Q8N715 623 aa13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 C12orf50Q8NA57 414 aaPredicted RBP13.61□□□□□ -0.23
HLA-DMB-258ENST00000418107 TTC13Q8NBP0 860 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms