RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 ZSCAN1Q8NBB4 408 aa7.07□□□□□ -1.28
CPS1-202ENST00000417946 C1orf54Q8WWF1 131 aa7.07□□□□□ -1.28
CPS1-202ENST00000417946 PRICKLE1Q96MT3 831 aaPredicted RBP7.07□□□□□ -1.28
CPS1-202ENST00000417946 OLFM3Q96PB7 478 aa7.07□□□□□ -1.28
CPS1-202ENST00000417946 RNF157Q96PX1 679 aa7.07□□□□□ -1.28
CPS1-202ENST00000417946 CYP2S1Q96SQ9 504 aa7.07□□□□□ -1.28
CPS1-202ENST00000417946 CORO1BQ9BR76 489 aa7.07□□□□□ -1.28
CPS1-202ENST00000417946 SLC46A2Q9BY10 475 aa7.07□□□□□ -1.28
CPS1-202ENST00000417946 OSBPL2Q9H1P3 480 aa7.07□□□□□ -1.28
CPS1-202ENST00000417946 ZNF576Q9H609 170 aa7.07□□□□□ -1.28
CPS1-202ENST00000417946 TLE6Q9H808 572 aa7.07□□□□□ -1.28
CPS1-202ENST00000417946 ANKZF1Q9H8Y5 726 aa7.07□□□□□ -1.28
CPS1-202ENST00000417946 GKN1Q9NS71 199 aa7.07□□□□□ -1.28
CPS1-202ENST00000417946 OLA1Q9NTK5 396 aaKnown RBP7.07□□□□□ -1.28
CPS1-202ENST00000417946 ZDHHC7Q9NXF8 308 aa7.07□□□□□ -1.28
CPS1-202ENST00000417946 CLEC1BQ9P126 229 aa7.07□□□□□ -1.28
CPS1-202ENST00000417946 RCOR3Q9P2K3 495 aaPredicted RBP7.07□□□□□ -1.28
CPS1-202ENST00000417946 SAE1Q9UBE0 346 aaPredicted RBP7.07□□□□□ -1.28
CPS1-202ENST00000417946 UXTQ9UBK9 157 aaPredicted RBP7.07□□□□□ -1.28
CPS1-202ENST00000417946 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.07□□□□□ -1.28
CPS1-202ENST00000417946 STOML2Q9UJZ1 356 aa7.07□□□□□ -1.28
CPS1-202ENST00000417946 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.07□□□□□ -1.28
CPS1-202ENST00000417946 HBS1LQ9Y450 684 aaKnown RBP7.07□□□□□ -1.28
CPS1-202ENST00000417946 V9GYY5 206 aaPredicted RBP7.07□□□□□ -1.28
CPS1-202ENST00000417946 IGLV3-10A0A075B6K4 115 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 GOLGA6L7A0A1B0GV03 622 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 ZSCAN5CA6NGD5 496 aaPredicted RBP7.06□□□□□ -1.28
CPS1-202ENST00000417946 EFCAB8A8MWE9 144 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 KRIT1O00522 736 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 RAD51CO43502 376 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 LIASO43766 372 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 MFSD11O43934 449 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 PHF2O75151 1096 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 TBX10O75333 385 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 HMBSP08397 361 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 MYL4P12829 197 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 CEBPBP17676 345 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 POU3F3P20264 500 aaPredicted RBP7.06□□□□□ -1.28
CPS1-202ENST00000417946 AMPD1P23109 780 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 CDC25CP30307 473 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 CCR1P32246 355 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 ATP5C1P36542 298 aaKnown RBP7.06□□□□□ -1.28
CPS1-202ENST00000417946 LTBRP36941 435 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 HCAR3P49019 387 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 SGSHP51688 502 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 MLLT6P55198 1093 aaPredicted RBP7.06□□□□□ -1.28
CPS1-202ENST00000417946 DYNLT1P63172 113 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 SLC7A9P82251 487 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 KRT81Q14533 505 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 GRIN2CQ14957 1233 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 NOMO1Q15155 1222 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 TEAD2Q15562 447 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 ERCC6LQ2NKX8 1250 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 MS4A13Q5J8X5 152 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 EFHC2Q5JST6 749 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 FAM182AQ5T1J6 154 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 AFMIDQ63HM1 303 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 KAZNQ674X7 775 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 DRICH1Q6PGQ1 229 aaPredicted RBP7.06□□□□□ -1.28
CPS1-202ENST00000417946 RFX8Q6ZV50 586 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 NLRP14Q86W24 1093 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 RFX6Q8HWS3 928 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 CCDC50Q8IVM0 306 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 ARHGAP12Q8IWW6 846 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 KLHL7Q8IXQ5 586 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 FAM217AQ8IXS0 508 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 EFHBQ8N7U6 833 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 ARL14EPQ8N8R7 260 aaPredicted RBP7.06□□□□□ -1.28
CPS1-202ENST00000417946 GLIS1Q8NBF1 620 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 NETO2Q8NC67 525 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 KCTD6Q8NC69 237 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 ACTL9Q8TC94 416 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 SLCO2A1Q92959 643 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 NKD2Q969F2 451 aaPredicted RBP7.06□□□□□ -1.28
CPS1-202ENST00000417946 IGSF8Q969P0 613 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 RSPRY1Q96DX4 576 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 ZSWIM3Q96MP5 696 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 CDK15Q96Q40 435 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 HAPLN3Q96S86 360 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 PNKPQ96T60 521 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 KRT12Q99456 494 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 CDCA3Q99618 268 aaPredicted RBP7.06□□□□□ -1.28
CPS1-202ENST00000417946 LRRC1Q9BTT6 524 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 CALN1Q9BXU9 219 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 SMG9Q9H0W8 520 aaKnown RBP7.06□□□□□ -1.28
CPS1-202ENST00000417946 PRDM12Q9H4Q4 367 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 NSUN3Q9H649 340 aaKnown RBP7.06□□□□□ -1.28
CPS1-202ENST00000417946 NOL6Q9H6R4 1146 aaKnown RBP7.06□□□□□ -1.28
CPS1-202ENST00000417946 WDCPQ9H6R7 721 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 LRRC19Q9H756 370 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 C10orf88Q9H8K7 445 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 SFXN1Q9H9B4 322 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 ASAH2Q9NR71 780 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 NDFIP2Q9NV92 336 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.06□□□□□ -1.28
CPS1-202ENST00000417946 SMPD4Q9NXE4 827 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 LMCD1Q9NZU5 365 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 DMGDHQ9UI17 866 aaKnown RBP7.06□□□□□ -1.28
CPS1-202ENST00000417946 DNMT3LQ9UJW3 386 aa7.06□□□□□ -1.28
CPS1-202ENST00000417946 CCL26Q9Y258 94 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms