RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 SORCS3Q9UPU3 1222 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 JRKLQ9Y4A0 524 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.72□□□□□ -1.01
TRIM48-201ENST00000417545 KIF2AO00139 706 aaPredicted RBP8.72□□□□□ -1.01
TRIM48-201ENST00000417545 STK25O00506 426 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 KCNK3O14649 394 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 CLDN11O75508 207 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 LRIG2O94898 1065 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 CYP17A1P05093 508 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 SRFP11831 508 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 TYRP14679 529 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 GOT1P17174 413 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 KDELR1P24390 212 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 MLLT6P55198 1093 aaPredicted RBP8.72□□□□□ -1.01
TRIM48-201ENST00000417545 CDH4P55283 916 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 OXCT1P55809 520 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 KDSRQ06136 332 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 TNK2Q07912 1038 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 EIF4EBP2Q13542 120 aaPredicted RBP8.72□□□□□ -1.01
TRIM48-201ENST00000417545 DHCR24Q15392 516 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 DPYSL2Q16555 572 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 CA9Q16790 459 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 FAM133BQ5BKY9 247 aaKnown RBP8.72□□□□□ -1.01
TRIM48-201ENST00000417545 DNTTIP2Q5QJE6 756 aaKnown RBP8.72□□□□□ -1.01
TRIM48-201ENST00000417545 MEI1Q5TIA1 1274 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 TXNRD3NBQ6F5E7 133 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 GRAMD4Q6IC98 578 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 TMCO3Q6UWJ1 677 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 RFX8Q6ZV50 586 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 TFAP2DQ7Z6R9 452 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 CIR1Q86X95 450 aaPredicted RBP8.72□□□□□ -1.01
TRIM48-201ENST00000417545 KATNAL2Q8IYT4 538 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 RCOR2Q8IZ40 523 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 GJD3Q8N144 294 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 SLC44A3Q8N4M1 653 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 NAT16Q8N8M0 369 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 EXD1Q8NHP7 514 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 RIN3Q8TB24 985 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 ZNF592Q92610 1267 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 PSMB7Q99436 277 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 NAPGQ99747 312 aaPredicted RBP8.72□□□□□ -1.01
TRIM48-201ENST00000417545 ZNF670Q9BS34 389 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 RPP25Q9BUL9 199 aaKnown RBP8.72□□□□□ -1.01
TRIM48-201ENST00000417545 TMEM121BQ9BXQ6 578 aaPredicted RBP8.72□□□□□ -1.01
TRIM48-201ENST00000417545 MUC3BQ9H195 1237 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 ECT2Q9H8V3 914 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 PCDH18Q9HCL0 1135 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 DNAJC17Q9NVM6 304 aaKnown RBP8.72□□□□□ -1.01
TRIM48-201ENST00000417545 DNAI1Q9UI46 699 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 PCDHA3Q9Y5H8 950 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 MIA3Q5JRA6 1907 aa8.72□□□□□ -1.01
TRIM48-201ENST00000417545 ENC1O14682 589 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 APOL1O14791 398 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 NEBLO76041 1014 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 LUC7L3O95232 432 aaKnown RBP8.71□□□□□ -1.01
TRIM48-201ENST00000417545 ZFXP17010 805 aaPredicted RBP8.71□□□□□ -1.01
TRIM48-201ENST00000417545 RHOQP17081 205 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 OR1E1P30953 314 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 MARCKSL1P49006 195 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 MAPKAPK2P49137 400 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 DGKGP49619 791 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 COPS2P61201 443 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 RPS24P62847 133 aaKnown RBP8.71□□□□□ -1.01
TRIM48-201ENST00000417545 DYNLT1P63172 113 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 NRG1Q02297 640 aaPredicted RBP8.71□□□□□ -1.01
TRIM48-201ENST00000417545 TFDP2Q14188 446 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 DPYSL3Q14195 570 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 ATP13A4Q4VNC1 1196 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 TFDP3Q5H9I0 405 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 C6orf118Q5T5N4 469 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 SPOCD1Q6ZMY3 1216 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 CHST9Q7L1S5 443 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 C14orf80Q86SX3 495 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 TMEM25Q86YD3 366 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 RNF135Q8IUD6 432 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 FAM217AQ8IXS0 508 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 ADGRG2Q8IZP9 1017 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 KRT35Q92764 455 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 ASIC4Q96FT7 647 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 PRICKLE1Q96MT3 831 aaPredicted RBP8.71□□□□□ -1.01
TRIM48-201ENST00000417545 LRRC3BQ96PB8 259 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 PRMT1Q99873 361 aaKnown RBP8.71□□□□□ -1.01
TRIM48-201ENST00000417545 C8orf33Q9H7E9 229 aaPredicted RBP8.71□□□□□ -1.01
TRIM48-201ENST00000417545 ANLNQ9NQW6 1124 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 KCND1Q9NSA2 647 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 GTSE1Q9NYZ3 720 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 MPP6Q9NZW5 540 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 RCOR3Q9P2K3 495 aaPredicted RBP8.71□□□□□ -1.01
TRIM48-201ENST00000417545 DEC1Q9P2X7 70 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 PPARGC1AQ9UBK2 798 aaKnown RBP8.71□□□□□ -1.01
TRIM48-201ENST00000417545 STOML2Q9UJZ1 356 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 DUSP12Q9UNI6 340 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 PIAS3Q9Y6X2 628 aa8.71□□□□□ -1.01
TRIM48-201ENST00000417545 SZT2Q5T011 3432 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 FAM72CH0Y354 149 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 HOXC11O43248 304 aaPredicted RBP8.71□□□□□ -1.02
TRIM48-201ENST00000417545 NARSO43776 548 aaKnown RBP8.71□□□□□ -1.02
TRIM48-201ENST00000417545 CEP104O60308 925 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 GREM1O60565 184 aa8.71□□□□□ -1.02
TRIM48-201ENST00000417545 RAMP2O60895 175 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms