RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 TNRC6BQ9UPQ9 1833 aaKnown RBP18.49■□□□□ 0.55
CPNE1-210ENST00000416778 HSF2BPO75031 334 aa18.49■□□□□ 0.55
CPNE1-210ENST00000416778 LUC7L3O95232 432 aaKnown RBP18.49■□□□□ 0.55
CPNE1-210ENST00000416778 SLC2A3P11169 496 aa18.49■□□□□ 0.55
CPNE1-210ENST00000416778 CEACAM1P13688 526 aa18.49■□□□□ 0.55
CPNE1-210ENST00000416778 EEF1GP26641 437 aaKnown RBP18.49■□□□□ 0.55
CPNE1-210ENST00000416778 CDH5P33151 784 aaPredicted RBP18.49■□□□□ 0.55
CPNE1-210ENST00000416778 NOVA1P51513 510 aaKnown RBP18.49■□□□□ 0.55
CPNE1-210ENST00000416778 SNX16P57768 344 aa18.49■□□□□ 0.55
CPNE1-210ENST00000416778 SEMA3BQ13214 749 aa18.49■□□□□ 0.55
CPNE1-210ENST00000416778 ARID5BQ14865 1188 aa18.49■□□□□ 0.55
CPNE1-210ENST00000416778 PTPN20Q4JDL3 420 aa18.49■□□□□ 0.55
CPNE1-210ENST00000416778 ATP6V0D2Q8N8Y2 350 aa18.49■□□□□ 0.55
CPNE1-210ENST00000416778 KDM1BQ8NB78 822 aa18.49■□□□□ 0.55
CPNE1-210ENST00000416778 ZNF397Q8NF99 534 aaPredicted RBP18.49■□□□□ 0.55
CPNE1-210ENST00000416778 GPT2Q8TD30 523 aa18.49■□□□□ 0.55
CPNE1-210ENST00000416778 FHOD1Q9Y613 1164 aa18.49■□□□□ 0.55
CPNE1-210ENST00000416778 CHD8Q9HCK8 2581 aa18.49■□□□□ 0.55
CPNE1-210ENST00000416778 ASCC3Q8N3C0 2202 aaKnown RBP18.48■□□□□ 0.55
CPNE1-210ENST00000416778 TYW5A2RUC4 315 aaKnown RBP18.48■□□□□ 0.55
CPNE1-210ENST00000416778 UPK3BL1B0FP48 263 aa18.48■□□□□ 0.55
CPNE1-210ENST00000416778 UPK3BL2E5RIL1 263 aa18.48■□□□□ 0.55
CPNE1-210ENST00000416778 H0Y626 953 aa18.48■□□□□ 0.55
CPNE1-210ENST00000416778 ASLP04424 464 aa18.48■□□□□ 0.55
CPNE1-210ENST00000416778 UCHL3P15374 230 aa18.48■□□□□ 0.55
CPNE1-210ENST00000416778 CYP11B1P15538 503 aa18.48■□□□□ 0.55
CPNE1-210ENST00000416778 CCR1P32246 355 aa18.48■□□□□ 0.55
CPNE1-210ENST00000416778 NOS2P35228 1153 aa18.48■□□□□ 0.55
CPNE1-210ENST00000416778 ZBTB16Q05516 673 aa18.48■□□□□ 0.55
CPNE1-210ENST00000416778 PITRM1Q5JRX3 1037 aa18.48■□□□□ 0.55
CPNE1-210ENST00000416778 DCAF12L1Q5VU92 463 aa18.48■□□□□ 0.55
CPNE1-210ENST00000416778 RBM43Q6ZSC3 357 aaKnown RBP18.48■□□□□ 0.55
CPNE1-210ENST00000416778 SLC26A9Q7LBE3 791 aa18.48■□□□□ 0.55
CPNE1-210ENST00000416778 PIP4P1Q86T03 277 aa18.48■□□□□ 0.55
CPNE1-210ENST00000416778 CCDC117Q8IWD4 279 aaPredicted RBP18.48■□□□□ 0.55
CPNE1-210ENST00000416778 APCDD1Q8J025 514 aa18.48■□□□□ 0.55
CPNE1-210ENST00000416778 C1orf216Q8TAB5 229 aa18.48■□□□□ 0.55
CPNE1-210ENST00000416778 GTPBP2Q9BX10 602 aaKnown RBP18.48■□□□□ 0.55
CPNE1-210ENST00000416778 STK33Q9BYT3 514 aa18.48■□□□□ 0.55
CPNE1-210ENST00000416778 FBRSQ9HAH7 460 aa18.48■□□□□ 0.55
CPNE1-210ENST00000416778 DDIT4Q9NX09 232 aa18.48■□□□□ 0.55
CPNE1-210ENST00000416778 SLCO3A1Q9UIG8 710 aa18.48■□□□□ 0.55
CPNE1-210ENST00000416778 ERVW-1Q9UQF0 538 aa18.48■□□□□ 0.55
CPNE1-210ENST00000416778 SYPP08247 313 aa18.47■□□□□ 0.55
CPNE1-210ENST00000416778 GNSP15586 552 aa18.47■□□□□ 0.55
CPNE1-210ENST00000416778 ABCB4P21439 1286 aa18.47■□□□□ 0.55
CPNE1-210ENST00000416778 ACSL1P33121 698 aa18.47■□□□□ 0.55
CPNE1-210ENST00000416778 CTSOP43234 321 aaPredicted RBP18.47■□□□□ 0.55
CPNE1-210ENST00000416778 GABRB2P47870 512 aa18.47■□□□□ 0.55
CPNE1-210ENST00000416778 PLK1P53350 603 aa18.47■□□□□ 0.55
CPNE1-210ENST00000416778 CDH18Q13634 790 aa18.47■□□□□ 0.55
CPNE1-210ENST00000416778 RAPGEF1Q13905 1077 aa18.47■□□□□ 0.55
CPNE1-210ENST00000416778 HNRNPA1L2Q32P51 320 aaKnown RBP18.47■□□□□ 0.55
CPNE1-210ENST00000416778 PLEKHG6Q3KR16 790 aa18.47■□□□□ 0.55
CPNE1-210ENST00000416778 C9orf64Q5T6V5 341 aa18.47■□□□□ 0.55
CPNE1-210ENST00000416778 FBXL22Q6P050 247 aa18.47■□□□□ 0.55
CPNE1-210ENST00000416778 FAM124AQ86V42 546 aa18.47■□□□□ 0.55
CPNE1-210ENST00000416778 CHSY1Q86X52 802 aa18.47■□□□□ 0.55
CPNE1-210ENST00000416778 CACUL1Q86Y37 369 aa18.47■□□□□ 0.55
CPNE1-210ENST00000416778 ZDHHC17Q8IUH5 632 aa18.47■□□□□ 0.55
CPNE1-210ENST00000416778 TMEM35BQ8NCS4 154 aa18.47■□□□□ 0.55
CPNE1-210ENST00000416778 RNF34Q969K3 372 aa18.47■□□□□ 0.55
CPNE1-210ENST00000416778 NT5C3BQ969T7 300 aa18.47■□□□□ 0.55
CPNE1-210ENST00000416778 PCED1AQ9H1Q7 454 aa18.47■□□□□ 0.55
CPNE1-210ENST00000416778 RSPH9Q9H1X1 276 aaPredicted RBP18.47■□□□□ 0.55
CPNE1-210ENST00000416778 FAM204AQ9H8W3 233 aa18.47■□□□□ 0.55
CPNE1-210ENST00000416778 DNAAF2Q9NVR5 837 aaKnown RBP18.47■□□□□ 0.55
CPNE1-210ENST00000416778 SUSD2Q9UGT4 822 aa18.47■□□□□ 0.55
CPNE1-210ENST00000416778 EPG5Q9HCE0 2579 aa18.47■□□□□ 0.55
CPNE1-210ENST00000416778 CEP192Q8TEP8 1941 aa18.47■□□□□ 0.55
CPNE1-210ENST00000416778 CKAP5Q14008 2032 aa18.46■□□□□ 0.55
CPNE1-210ENST00000416778 SYNJ2BP-COX16A0A087WUM0 186 aa18.46■□□□□ 0.55
CPNE1-210ENST00000416778 A0A1B0GTW7 788 aa18.46■□□□□ 0.55
CPNE1-210ENST00000416778 F5H5T6 163 aa18.46■□□□□ 0.55
CPNE1-210ENST00000416778 SRPRAP08240 638 aaKnown RBP18.46■□□□□ 0.55
CPNE1-210ENST00000416778 MATKP42679 507 aa18.46■□□□□ 0.55
CPNE1-210ENST00000416778 ATXN3P54252 364 aaPredicted RBP18.46■□□□□ 0.55
CPNE1-210ENST00000416778 ST8SIA6P61647 398 aa18.46■□□□□ 0.55
CPNE1-210ENST00000416778 SHC2P98077 582 aa18.46■□□□□ 0.55
CPNE1-210ENST00000416778 ECT2LQ008S8 904 aa18.46■□□□□ 0.55
CPNE1-210ENST00000416778 AUHQ13825 339 aaKnown RBP18.46■□□□□ 0.55
CPNE1-210ENST00000416778 CDKAL1Q5VV42 579 aa18.46■□□□□ 0.55
CPNE1-210ENST00000416778 MINDY1Q8N5J2 469 aa18.46■□□□□ 0.55
CPNE1-210ENST00000416778 DEFB124Q8NES8 71 aa18.46■□□□□ 0.55
CPNE1-210ENST00000416778 OR2I1PQ8NGU4 316 aa18.46■□□□□ 0.55
CPNE1-210ENST00000416778 IGSF8Q969P0 613 aa18.46■□□□□ 0.55
CPNE1-210ENST00000416778 C18orf8Q96DM3 657 aa18.46■□□□□ 0.55
CPNE1-210ENST00000416778 FAM129BQ96TA1 746 aa18.46■□□□□ 0.55
CPNE1-210ENST00000416778 NPY6RQ99463 290 aa18.46■□□□□ 0.55
CPNE1-210ENST00000416778 ADAM33Q9BZ11 813 aa18.46■□□□□ 0.55
CPNE1-210ENST00000416778 VPS16Q9H269 839 aa18.46■□□□□ 0.55
CPNE1-210ENST00000416778 C6orf106Q9H6K1 298 aaPredicted RBP18.46■□□□□ 0.55
CPNE1-210ENST00000416778 TAB2Q9NYJ8 693 aa18.46■□□□□ 0.55
CPNE1-210ENST00000416778 COX16Q9P0S2 106 aa18.46■□□□□ 0.55
CPNE1-210ENST00000416778 PCNX2A6NKB5 2137 aa18.46■□□□□ 0.55
CPNE1-210ENST00000416778 TARSL2A2RTX5 802 aaKnown RBP18.45■□□□□ 0.54
CPNE1-210ENST00000416778 TTC34A8MYJ7 566 aa18.45■□□□□ 0.54
CPNE1-210ENST00000416778 M0QYT0 321 aa18.45■□□□□ 0.54
CPNE1-210ENST00000416778 PES1O00541 588 aaKnown RBP18.45■□□□□ 0.54
CPNE1-210ENST00000416778 OPHN1O60890 802 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms