RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 SNX11Q9Y5W9 270 aa14.97□□□□□ -0.01
PAF1-202ENST00000416728 PPP1R3GB7ZBB8 358 aa14.96□□□□□ -0.02
PAF1-202ENST00000416728 CAPN9O14815 690 aa14.96□□□□□ -0.02
PAF1-202ENST00000416728 RNASEH1O60930 286 aaKnown RBP14.96□□□□□ -0.02
PAF1-202ENST00000416728 GNA14O95837 355 aa14.96□□□□□ -0.02
PAF1-202ENST00000416728 AFPP02771 609 aaKnown RBP14.96□□□□□ -0.02
PAF1-202ENST00000416728 BMP6P22004 513 aa14.96□□□□□ -0.02
PAF1-202ENST00000416728 RPL34P49207 117 aaKnown RBP14.96□□□□□ -0.02
PAF1-202ENST00000416728 HNRNPA1L2Q32P51 320 aaKnown RBP14.96□□□□□ -0.02
PAF1-202ENST00000416728 MS4A13Q5J8X5 152 aa14.96□□□□□ -0.02
PAF1-202ENST00000416728 USP30Q70CQ3 517 aa14.96□□□□□ -0.02
PAF1-202ENST00000416728 SLCO6A1Q86UG4 719 aa14.96□□□□□ -0.02
PAF1-202ENST00000416728 TAC4Q86UU9 113 aa14.96□□□□□ -0.02
PAF1-202ENST00000416728 ADAM32Q8TC27 787 aa14.96□□□□□ -0.02
PAF1-202ENST00000416728 MYEOVQ96EZ4 313 aa14.96□□□□□ -0.02
PAF1-202ENST00000416728 MYO19Q96H55 970 aa14.96□□□□□ -0.02
PAF1-202ENST00000416728 SLC39A13Q96H72 371 aa14.96□□□□□ -0.02
PAF1-202ENST00000416728 INTS2Q9H0H0 1204 aaKnown RBP14.96□□□□□ -0.02
PAF1-202ENST00000416728 PABPC3Q9H361 631 aaKnown RBP14.96□□□□□ -0.02
PAF1-202ENST00000416728 INTS6Q9UL03 887 aaKnown RBP14.96□□□□□ -0.02
PAF1-202ENST00000416728 CNTN6Q9UQ52 1028 aa14.96□□□□□ -0.02
PAF1-202ENST00000416728 ANKRD6Q9Y2G4 727 aa14.96□□□□□ -0.02
PAF1-202ENST00000416728 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.96□□□□□ -0.02
PAF1-202ENST00000416728 MUC22E2RYF6 1773 aaPredicted RBP14.95□□□□□ -0.02
PAF1-202ENST00000416728 FAM208BQ5VWN6 2430 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 FAM47DPA6NHR8 397 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 BIN1O00499 593 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 MED7O43513 233 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 SIN3BO75182 1162 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 LUC7L3O95232 432 aaKnown RBP14.95□□□□□ -0.02
PAF1-202ENST00000416728 MOCS3O95396 460 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 APOEP02649 317 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 MARSP56192 900 aaKnown RBP14.95□□□□□ -0.02
PAF1-202ENST00000416728 STX17P56962 302 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 SCAPQ12770 1279 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 SFSWAPQ12872 951 aaKnown RBP14.95□□□□□ -0.02
PAF1-202ENST00000416728 PAK1Q13153 545 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 MORC3Q14149 939 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 MEA1Q16626 185 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 DCAF6Q58WW2 860 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 FSCBQ5H9T9 825 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 PITRM1Q5JRX3 1037 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 KIAA0895LQ68EN5 471 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 DENND1BQ6P3S1 775 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 LAYNQ6UX15 382 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 CCNI2Q6ZMN8 369 aaPredicted RBP14.95□□□□□ -0.02
PAF1-202ENST00000416728 DBX2Q6ZNG2 339 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 MMS22LQ6ZRQ5 1243 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 BEND5Q7L4P6 421 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 ADAT2Q7Z6V5 191 aaKnown RBP14.95□□□□□ -0.02
PAF1-202ENST00000416728 PROSER1Q86XN7 944 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 DHX40Q8IX18 779 aaKnown RBP14.95□□□□□ -0.02
PAF1-202ENST00000416728 CFAP52Q8N1V2 620 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 KDM1BQ8NB78 822 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 BAHD1Q8TBE0 780 aaPredicted RBP14.95□□□□□ -0.02
PAF1-202ENST00000416728 STK32AQ8WU08 396 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 IGSF8Q969P0 613 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 MRGPRX3Q96LB0 322 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 FBXL12Q9NXK8 326 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 KIAA1522Q9P206 1035 aaPredicted RBP14.95□□□□□ -0.02
PAF1-202ENST00000416728 TJP2Q9UDY2 1190 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 CEP83Q9Y592 693 aa14.95□□□□□ -0.02
PAF1-202ENST00000416728 LETM1O95202 739 aaPredicted RBP14.94□□□□□ -0.02
PAF1-202ENST00000416728 CCT8P50990 548 aa14.94□□□□□ -0.02
PAF1-202ENST00000416728 ARID5BQ14865 1188 aa14.94□□□□□ -0.02
PAF1-202ENST00000416728 CST6Q15828 149 aa14.94□□□□□ -0.02
PAF1-202ENST00000416728 SYPL2Q5VXT5 272 aa14.94□□□□□ -0.02
PAF1-202ENST00000416728 RNF219Q5W0B1 726 aaPredicted RBP14.94□□□□□ -0.02
PAF1-202ENST00000416728 CHSY1Q86X52 802 aa14.94□□□□□ -0.02
PAF1-202ENST00000416728 LGI2Q8N0V4 545 aa14.94□□□□□ -0.02
PAF1-202ENST00000416728 SRRTQ9BXP5 876 aaKnown RBP14.94□□□□□ -0.02
PAF1-202ENST00000416728 SLC4A5Q9BY07 1137 aa14.94□□□□□ -0.02
PAF1-202ENST00000416728 POPDC2Q9HBU9 364 aa14.94□□□□□ -0.02
PAF1-202ENST00000416728 UBE2TQ9NPD8 197 aaPredicted RBP14.94□□□□□ -0.02
PAF1-202ENST00000416728 XPO7Q9UIA9 1087 aaKnown RBP14.94□□□□□ -0.02
PAF1-202ENST00000416728 ERVW-1Q9UQF0 538 aa14.94□□□□□ -0.02
PAF1-202ENST00000416728 BTBD3Q9Y2F9 522 aa14.94□□□□□ -0.02
PAF1-202ENST00000416728 A0A1W2PP55 124 aa14.93□□□□□ -0.02
PAF1-202ENST00000416728 E5RJQ4 531 aa14.93□□□□□ -0.02
PAF1-202ENST00000416728 MID1O15344 667 aa14.93□□□□□ -0.02
PAF1-202ENST00000416728 PAPSS1O43252 624 aaPredicted RBP14.93□□□□□ -0.02
PAF1-202ENST00000416728 THAP12O43422 761 aa14.93□□□□□ -0.02
PAF1-202ENST00000416728 CAPNS1P04632 268 aa14.93□□□□□ -0.02
PAF1-202ENST00000416728 IGHV4-34P06331 123 aa14.93□□□□□ -0.02
PAF1-202ENST00000416728 SRPRAP08240 638 aaKnown RBP14.93□□□□□ -0.02
PAF1-202ENST00000416728 ATXN1LP0C7T5 689 aaKnown RBP14.93□□□□□ -0.02
PAF1-202ENST00000416728 TACR2P21452 398 aa14.93□□□□□ -0.02
PAF1-202ENST00000416728 CTSOP43234 321 aaPredicted RBP14.93□□□□□ -0.02
PAF1-202ENST00000416728 GRK6P43250 576 aa14.93□□□□□ -0.02
PAF1-202ENST00000416728 YWHAZP63104 245 aaKnown RBP14.93□□□□□ -0.02
PAF1-202ENST00000416728 RACK1P63244 317 aaKnown RBP14.93□□□□□ -0.02
PAF1-202ENST00000416728 ECT2LQ008S8 904 aa14.93□□□□□ -0.02
PAF1-202ENST00000416728 ZC3H12AQ5D1E8 599 aaKnown RBP14.93□□□□□ -0.02
PAF1-202ENST00000416728 C9orf64Q5T6V5 341 aa14.93□□□□□ -0.02
PAF1-202ENST00000416728 RAP1GAP2Q684P5 730 aa14.93□□□□□ -0.02
PAF1-202ENST00000416728 MMAAQ8IVH4 418 aaKnown RBP14.93□□□□□ -0.02
PAF1-202ENST00000416728 BTN2A3PQ96KV6 586 aa14.93□□□□□ -0.02
PAF1-202ENST00000416728 MED15Q96RN5 788 aa14.93□□□□□ -0.02
PAF1-202ENST00000416728 OMDQ99983 421 aa14.93□□□□□ -0.02
PAF1-202ENST00000416728 ORAI3Q9BRQ5 295 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms