RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 C2CD2LO14523 706 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 PPP1R12AO14974 1030 aaPredicted RBP6.84□□□□□ -1.31
HDAC8-211ENST00000415409 POLR3GO15318 223 aaPredicted RBP6.84□□□□□ -1.31
HDAC8-211ENST00000415409 NCAM2O15394 837 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 KCNN4O15554 427 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 SOAT2O75908 522 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 SYF2O95926 243 aaKnown RBP6.84□□□□□ -1.31
HDAC8-211ENST00000415409 EFEMP2O95967 443 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 IGLV3-25P01717 112 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 APOEP02649 317 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 MYZAPP0CAP1 466 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 EN2P19622 333 aaPredicted RBP6.84□□□□□ -1.31
HDAC8-211ENST00000415409 MX2P20592 715 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 RBL1P28749 1068 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 ELF1P32519 619 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 SERPINB6P35237 376 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 ALDH1A3P47895 512 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 KPNA1P52294 538 aaPredicted RBP6.84□□□□□ -1.31
HDAC8-211ENST00000415409 ARL4CP56559 192 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 COG7P83436 770 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 GBE1Q04446 702 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 TAF10Q12962 218 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 MTA1Q13330 715 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 DPYSQ14117 519 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 PPP2R5DQ14738 602 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 VEPH1Q14D04 833 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 PAFAH1B3Q15102 231 aaKnown RBP6.84□□□□□ -1.31
HDAC8-211ENST00000415409 UAP1Q16222 522 aaPredicted RBP6.84□□□□□ -1.31
HDAC8-211ENST00000415409 TAF12Q16514 161 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 SLC45A4Q5BKX6 768 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 CEP85LQ5SZL2 805 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 ACBD5Q5T8D3 534 aaPredicted RBP6.84□□□□□ -1.31
HDAC8-211ENST00000415409 NCBP2-AS2Q69YL0 99 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 PSRC1Q6PGN9 363 aaPredicted RBP6.84□□□□□ -1.31
HDAC8-211ENST00000415409 PPP1R21Q6ZMI0 780 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 CENPUQ71F23 418 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 OTOP2Q7RTS6 562 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 PRUNE1Q86TP1 453 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 GPR65Q8IYL9 337 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 RNF168Q8IYW5 571 aaPredicted RBP6.84□□□□□ -1.31
HDAC8-211ENST00000415409 FIBCD1Q8N539 461 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 GLIS1Q8NBF1 620 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 GIPC2Q8TF65 315 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 TFB1MQ8WVM0 346 aaKnown RBP6.84□□□□□ -1.31
HDAC8-211ENST00000415409 OVCA2Q8WZ82 227 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 CASP10Q92851 521 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 TTC25Q96NG3 672 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 QKIQ96PU8 341 aaKnown RBP eCLIP6.84□□□□□ -1.311e-6■■■■□ 25.6
HDAC8-211ENST00000415409 INSM2Q96T92 566 aaPredicted RBP6.84□□□□□ -1.31
HDAC8-211ENST00000415409 SH3GL2Q99962 352 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 CCDC77Q9BR77 488 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 VN1R3Q9BXE9 311 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 COL25A1Q9BXS0 654 aaPredicted RBP6.84□□□□□ -1.31
HDAC8-211ENST00000415409 FRMD8Q9BZ67 464 aaPredicted RBP6.84□□□□□ -1.31
HDAC8-211ENST00000415409 KLC2Q9H0B6 622 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 C10orf88Q9H8K7 445 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 NMUR1Q9HB89 426 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 RC3H2Q9HBD1 1191 aaKnown RBP6.84□□□□□ -1.31
HDAC8-211ENST00000415409 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.84□□□□□ -1.31
HDAC8-211ENST00000415409 MRPL17Q9NRX2 175 aaKnown RBP6.84□□□□□ -1.31
HDAC8-211ENST00000415409 ARHGEF38Q9NXL2 777 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 DTLQ9NZJ0 730 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 OR12D3Q9UGF7 316 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 MAFFQ9ULX9 164 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 TLR6Q9Y2C9 796 aa6.84□□□□□ -1.31
HDAC8-211ENST00000415409 MKI67P46013 3256 aaKnown RBP6.84□□□□□ -1.32
HDAC8-211ENST00000415409 TRIP12Q14669 1992 aaPredicted RBP6.83□□□□□ -1.32
HDAC8-211ENST00000415409 WDR27A2RRH5 827 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 GOLGA6CA6NDK9 693 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 C5orf60A6NFR6 353 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 FAM72CH0Y354 149 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 PRRG1O14668 218 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 DCLK1O15075 740 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 EIF3HO15372 352 aaKnown RBP eCLIP6.83□□□□□ -1.32
HDAC8-211ENST00000415409 FGF10O15520 208 aaPredicted RBP6.83□□□□□ -1.32
HDAC8-211ENST00000415409 ADAM12O43184 909 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 MTSS1O43312 755 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 RIPK2O43353 540 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 PAGE1O75459 146 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 GCATO75600 419 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 ABLIM3O94929 683 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 GJB5O95377 273 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 VNN2O95498 520 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 NUDT17P0C025 328 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 GOLGA6DP0CG33 693 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 CSH1P0DML2 217 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 CSH2P0DML3 217 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 ERCC2P18074 760 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 RPL17P18621 184 aaKnown RBP6.83□□□□□ -1.32
HDAC8-211ENST00000415409 EPHB2P29323 1055 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 CHKAP35790 457 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 CTSOP43234 321 aaPredicted RBP6.83□□□□□ -1.32
HDAC8-211ENST00000415409 MAGEA4P43358 317 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 GDF10P55107 478 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 TBX4P57082 545 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 BASP1P80723 227 aaKnown RBP6.83□□□□□ -1.32
HDAC8-211ENST00000415409 EFEMP1Q12805 493 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 SLC10A2Q12908 348 aaPredicted RBP6.83□□□□□ -1.32
HDAC8-211ENST00000415409 SEMA3BQ13214 749 aa6.83□□□□□ -1.32
HDAC8-211ENST00000415409 EIF4EBP2Q13542 120 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms