RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 HELLSQ9NRZ9 838 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 VPS4AQ9UN37 437 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 SLC45A1Q9Y2W3 748 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 DTNAQ9Y4J8 743 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 EIF2AK4Q9P2K8 1649 aaKnown RBP4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 RAD54L2Q9Y4B4 1467 aa4.16□□□□□ -1.74
HMGB3P23-201ENST00000414981 CEP170Q5SW79 1584 aa4.15□□□□□ -1.74
HMGB3P23-201ENST00000414981 PIK3C2GO75747 1445 aa4.15□□□□□ -1.74
HMGB3P23-201ENST00000414981 PDS5BQ9NTI5 1447 aa4.15□□□□□ -1.74
HMGB3P23-201ENST00000414981 ANKRD50Q9ULJ7 1429 aa4.15□□□□□ -1.74
HMGB3P23-201ENST00000414981 BICDL2A1A5D9 508 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 FSD2A1L4K1 749 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 RASA4BC9J798 803 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 PRYO14603 147 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 ADAM10O14672 748 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 DHHO43323 396 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 RASA4O43374 803 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 NCK2O43639 380 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 RNASEH2AO75792 299 aaKnown RBP4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 SGPL1O95470 568 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 NTSR2O95665 410 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 MYL1P05976 194 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 ENO1P06733 434 aaKnown RBP4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 NBPF7P0C2Y1 421 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 SRGAP2BP0DMP2 458 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 PRF1P14222 555 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 PECAM1P16284 738 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 DRD1P21728 446 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 GSTM5P46439 218 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 CPA2P48052 419 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 TRAPPC10P48553 1259 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 ZNF84P51523 738 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 SLC12A2P55011 1212 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 BFSP2Q13515 415 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 BRD3Q15059 726 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 SLC35G1Q2M3R5 365 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 ARL6IP4Q66PJ3 421 aaKnown RBP4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 ERAP2Q6P179 960 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 PDXDC1Q6P996 788 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 RBM44Q6ZP01 1051 aaKnown RBP4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 PIK3AP1Q6ZUJ8 805 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 PIP4P1Q86T03 277 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 TTC30AQ86WT1 665 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 SUGP1Q8IWZ8 645 aaKnown RBP4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 UEVLDQ8IX04 471 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 OR2C3Q8N628 320 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 MYRIPQ8NFW9 859 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 MPLKIPQ8TAP9 179 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 WIPF2Q8TF74 440 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 IGFBPL1Q8WX77 278 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 PIGKQ92643 395 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 AKAP1Q92667 903 aaKnown RBP eCLIP4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 CELF1Q92879 486 aaKnown RBP4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 GJA10Q969M2 543 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 ZBTB9Q96C00 473 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 ZNF845Q96IR2 970 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 CCDC138Q96M89 665 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 FCRL5Q96RD9 977 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 MAP7D2Q96T17 732 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 PAAF1Q9BRP4 392 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 TRMOQ9BU70 441 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 UPF2Q9HAU5 1272 aaKnown RBP4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 TAGLN3Q9UI15 199 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 PCDHB2Q9Y5E7 798 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 ATP10AO60312 1499 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 CROCC2H7BZ55 1655 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 KIAA0586Q9BVV6 1533 aa4.15□□□□□ -1.75
HMGB3P23-201ENST00000414981 EIF4G3O43432 1585 aaKnown RBP4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 VIRMAQ69YN4 1812 aaKnown RBP4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 CCDC187A0A096LP49 1063 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 FAM234BA2RU67 622 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 PRSS47A8MTI9 375 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 PROB1E7EW31 1015 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 CTIFO43310 598 aaKnown RBP4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 PLA2G6O60733 806 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 GLP2RO95838 553 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 IGHDP01880 384 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 TPM2P07951 284 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 SLC3A2P08195 630 aaKnown RBP4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 RPS6KB1P23443 525 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 HOXA7P31268 230 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 IDUAP35475 653 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 ME1P48163 572 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 MAPK7Q13164 816 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 GAB1Q13480 694 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 PICALMQ13492 652 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 PMS2P11Q13670 270 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 ELF2Q15723 593 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 GLE1Q53GS7 698 aaKnown RBP4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 ARHGAP15Q53QZ3 475 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 AWAT2Q6E213 333 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 KYAT3Q6YP21 454 aaKnown RBP4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 IRF2BP2Q7Z5L9 587 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 MTERF4Q7Z6M4 381 aaKnown RBP4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 TFAP2DQ7Z6R9 452 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 ANKRD13BQ86YJ7 626 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 RASGRP3Q8IV61 690 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 LAS2Q8IYD9 372 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms