RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 GEMIN8Q9NWZ8 242 aaKnown RBP16.44■□□□□ 0.22
CPNE1-208ENST00000414711 U3KQA8 63 aa16.44■□□□□ 0.22
CPNE1-208ENST00000414711 KIAA0391O15091 583 aaKnown RBP16.43■□□□□ 0.22
CPNE1-208ENST00000414711 DLATP10515 647 aaKnown RBP16.43■□□□□ 0.22
CPNE1-208ENST00000414711 RALAP11233 206 aa16.43■□□□□ 0.22
CPNE1-208ENST00000414711 PSEN1P49768 467 aa16.43■□□□□ 0.22
CPNE1-208ENST00000414711 EFEMP1Q12805 493 aa16.43■□□□□ 0.22
CPNE1-208ENST00000414711 MPPE1Q53F39 396 aa16.43■□□□□ 0.22
CPNE1-208ENST00000414711 ARL6IP4Q66PJ3 421 aaKnown RBP16.43■□□□□ 0.22
CPNE1-208ENST00000414711 RBM44Q6ZP01 1051 aaKnown RBP16.43■□□□□ 0.22
CPNE1-208ENST00000414711 SND1Q7KZF4 910 aaKnown RBP eCLIP16.43■□□□□ 0.22
CPNE1-208ENST00000414711 SCD5Q86SK9 330 aa16.43■□□□□ 0.22
CPNE1-208ENST00000414711 ACOT1Q86TX2 421 aa16.43■□□□□ 0.22
CPNE1-208ENST00000414711 ZNF276Q8N554 614 aa16.43■□□□□ 0.22
CPNE1-208ENST00000414711 AADATQ8N5Z0 425 aa16.43■□□□□ 0.22
CPNE1-208ENST00000414711 RDH13Q8NBN7 331 aa16.43■□□□□ 0.22
CPNE1-208ENST00000414711 WDR36Q8NI36 951 aaKnown RBP16.43■□□□□ 0.22
CPNE1-208ENST00000414711 NLGN3Q9NZ94 848 aa16.43■□□□□ 0.22
CPNE1-208ENST00000414711 PLEKHB1Q9UF11 243 aaPredicted RBP16.43■□□□□ 0.22
CPNE1-208ENST00000414711 UBE4BO95155 1302 aa16.43■□□□□ 0.22
CPNE1-208ENST00000414711 FBN2P35556 2912 aa16.42■□□□□ 0.22
CPNE1-208ENST00000414711 HHLA1C9JL84 531 aa16.42■□□□□ 0.22
CPNE1-208ENST00000414711 STAU1O95793 577 aaKnown RBP16.42■□□□□ 0.22
CPNE1-208ENST00000414711 FAM200BP0CF97 657 aa16.42■□□□□ 0.22
CPNE1-208ENST00000414711 GOT1P17174 413 aa16.42■□□□□ 0.22
CPNE1-208ENST00000414711 SLC8A1P32418 973 aa16.42■□□□□ 0.22
CPNE1-208ENST00000414711 PSMD8P48556 350 aa16.42■□□□□ 0.22
CPNE1-208ENST00000414711 HARS2P49590 506 aaKnown RBP16.42■□□□□ 0.22
CPNE1-208ENST00000414711 MYL6P60660 151 aa16.42■□□□□ 0.22
CPNE1-208ENST00000414711 HNRNPA1L2Q32P51 320 aaKnown RBP16.42■□□□□ 0.22
CPNE1-208ENST00000414711 KIAA0907Q7Z7F0 614 aaPredicted RBP16.42■□□□□ 0.22
CPNE1-208ENST00000414711 PRPF39Q86UA1 669 aaKnown RBP16.42■□□□□ 0.22
CPNE1-208ENST00000414711 ARRDC3Q96B67 414 aa16.42■□□□□ 0.22
CPNE1-208ENST00000414711 MYO19Q96H55 970 aa16.42■□□□□ 0.22
CPNE1-208ENST00000414711 XYLT2Q9H1B5 865 aa16.42■□□□□ 0.22
CPNE1-208ENST00000414711 FAM49BQ9NUQ9 324 aa16.42■□□□□ 0.22
CPNE1-208ENST00000414711 CLIC5Q9NZA1 410 aa16.42■□□□□ 0.22
CPNE1-208ENST00000414711 PCDHB13Q9Y5F0 798 aa16.42■□□□□ 0.22
CPNE1-208ENST00000414711 PCDHGA4Q9Y5G9 962 aa16.42■□□□□ 0.22
CPNE1-208ENST00000414711 TBC1D3DA0A087WVF3 549 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 TBC1D3IA0A087WXS9 549 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 TBC1D3EA0A087X179 549 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 TBC1D3KA0A087X1G2 549 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 TBC1D3FA6NER0 549 aaPredicted RBP16.41■□□□□ 0.22
CPNE1-208ENST00000414711 TBC1D3LB9A6J9 549 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 NOBOXO60393 691 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 PIAS2O75928 621 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 CLSTN1O94985 981 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 TBC1D3HP0C7X1 549 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 GAP43P17677 238 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 TNNI1P19237 187 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 POLR2EP19388 210 aaKnown RBP16.41■□□□□ 0.22
CPNE1-208ENST00000414711 MAT2AP31153 395 aaKnown RBP16.41■□□□□ 0.22
CPNE1-208ENST00000414711 CASRP41180 1078 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 NEK4P51957 841 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 TRPC3Q13507 836 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 ALCAMQ13740 583 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 STAT4Q14765 748 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 CLCA4Q14CN2 919 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 TGIF1Q15583 401 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 KIF26BQ2KJY2 2108 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 RILPL1Q5EBL4 403 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 TBC1D3GQ6DHY5 549 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 TBC1D3CQ6IPX1 549 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 SCARA5Q6ZMJ2 495 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 CLEC20AQ6ZU45 233 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 TBC1D3Q8IZP1 549 aaPredicted RBP16.41■□□□□ 0.22
CPNE1-208ENST00000414711 FAM184AQ8NB25 1140 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 SYAP1Q96A49 352 aaPredicted RBP16.41■□□□□ 0.22
CPNE1-208ENST00000414711 CGRRF1Q99675 332 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 LLPHQ9BRT6 129 aaKnown RBP16.41■□□□□ 0.22
CPNE1-208ENST00000414711 ARHGAP20Q9P2F6 1191 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 DMTF1Q9Y222 760 aa16.41■□□□□ 0.22
CPNE1-208ENST00000414711 CCDC187A0A096LP49 1063 aa16.4■□□□□ 0.22
CPNE1-208ENST00000414711 ADORA2BP29275 332 aa16.4■□□□□ 0.22
CPNE1-208ENST00000414711 ATICP31939 592 aa16.4■□□□□ 0.22
CPNE1-208ENST00000414711 NUDT1P36639 197 aa16.4■□□□□ 0.22
CPNE1-208ENST00000414711 ST8SIA6P61647 398 aa16.4■□□□□ 0.22
CPNE1-208ENST00000414711 HMGN5P82970 282 aaKnown RBP16.4■□□□□ 0.22
CPNE1-208ENST00000414711 CCDC186Q7Z3E2 898 aa16.4■□□□□ 0.22
CPNE1-208ENST00000414711 KLHDC7BQ96G42 594 aa16.4■□□□□ 0.22
CPNE1-208ENST00000414711 FUCA2Q9BTY2 467 aa16.4■□□□□ 0.22
CPNE1-208ENST00000414711 FGFBP2Q9BYJ0 223 aa16.4■□□□□ 0.22
CPNE1-208ENST00000414711 PNPLA8Q9NP80 782 aa16.4■□□□□ 0.22
CPNE1-208ENST00000414711 OLFML3Q9NRN5 406 aa16.4■□□□□ 0.22
CPNE1-208ENST00000414711 KLHL11Q9NVR0 708 aa16.4■□□□□ 0.22
CPNE1-208ENST00000414711 MARCH2Q9P0N8 246 aa16.4■□□□□ 0.22
CPNE1-208ENST00000414711 CYTH4Q9UIA0 394 aa16.4■□□□□ 0.22
CPNE1-208ENST00000414711 STRIP2Q9ULQ0 834 aa16.4■□□□□ 0.22
CPNE1-208ENST00000414711 CA5BQ9Y2D0 317 aa16.4■□□□□ 0.22
CPNE1-208ENST00000414711 SLC12A8A0AV02 714 aa16.39■□□□□ 0.21
CPNE1-208ENST00000414711 TCEA3O75764 348 aa16.39■□□□□ 0.21
CPNE1-208ENST00000414711 C5AR1P21730 350 aa16.39■□□□□ 0.21
CPNE1-208ENST00000414711 SLC5A2P31639 672 aa16.39■□□□□ 0.21
CPNE1-208ENST00000414711 CD70P32970 193 aa16.39■□□□□ 0.21
CPNE1-208ENST00000414711 ZNF445P59923 1031 aa16.39■□□□□ 0.21
CPNE1-208ENST00000414711 KCNMA1Q12791 1236 aa16.39■□□□□ 0.21
CPNE1-208ENST00000414711 NCAPHQ15003 741 aa16.39■□□□□ 0.21
CPNE1-208ENST00000414711 CDKN3Q16667 212 aa16.39■□□□□ 0.21
CPNE1-208ENST00000414711 POM121L1PQ3SYA9 428 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms