RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 SLC30A4O14863 429 aa27.21■■□□□ 1.95
VEGFA-207ENST00000413642 LSM8O95777 96 aaKnown RBP27.21■■□□□ 1.95
VEGFA-207ENST00000413642 SLC2A3P11169 496 aa27.21■■□□□ 1.95
VEGFA-207ENST00000413642 CSKP41240 450 aa27.21■■□□□ 1.95
VEGFA-207ENST00000413642 STAT1P42224 750 aa27.21■■□□□ 1.95
VEGFA-207ENST00000413642 IRAK1P51617 712 aa27.21■■□□□ 1.95
VEGFA-207ENST00000413642 CDR2Q01850 454 aa27.21■■□□□ 1.95
VEGFA-207ENST00000413642 TRNP1Q6NT89 227 aa27.21■■□□□ 1.95
VEGFA-207ENST00000413642 FBXL22Q6P050 247 aa27.21■■□□□ 1.95
VEGFA-207ENST00000413642 DHX40Q8IX18 779 aaKnown RBP27.21■■□□□ 1.95
VEGFA-207ENST00000413642 IGSF8Q969P0 613 aa27.21■■□□□ 1.95
VEGFA-207ENST00000413642 PCDHB18PQ96TA0 734 aa27.21■■□□□ 1.95
VEGFA-207ENST00000413642 PIGVQ9NUD9 493 aa27.21■■□□□ 1.95
VEGFA-207ENST00000413642 DMXL1Q9Y485 3027 aa27.21■■□□□ 1.95
VEGFA-207ENST00000413642 H0Y626 953 aa27.2■■□□□ 1.94
VEGFA-207ENST00000413642 FOXD2O60548 495 aaPredicted RBP27.2■■□□□ 1.94
VEGFA-207ENST00000413642 CYP1A1P04798 512 aaPredicted RBP27.2■■□□□ 1.94
VEGFA-207ENST00000413642 ATP5BP06576 529 aaKnown RBP27.2■■□□□ 1.94
VEGFA-207ENST00000413642 SDHBP21912 280 aa27.2■■□□□ 1.94
VEGFA-207ENST00000413642 ITPKAP23677 461 aa27.2■■□□□ 1.94
VEGFA-207ENST00000413642 FLT3P36888 993 aa27.2■■□□□ 1.94
VEGFA-207ENST00000413642 CTSOP43234 321 aaPredicted RBP27.2■■□□□ 1.94
VEGFA-207ENST00000413642 SULT1E1P49888 294 aa27.2■■□□□ 1.94
VEGFA-207ENST00000413642 PITRM1Q5JRX3 1037 aa27.2■■□□□ 1.94
VEGFA-207ENST00000413642 LYSMD4Q5XG99 296 aa27.2■■□□□ 1.94
VEGFA-207ENST00000413642 SLC36A4Q6YBV0 504 aa27.2■■□□□ 1.94
VEGFA-207ENST00000413642 ERMP1Q7Z2K6 904 aa27.2■■□□□ 1.94
VEGFA-207ENST00000413642 C14orf80Q86SX3 495 aa27.2■■□□□ 1.94
VEGFA-207ENST00000413642 SLC41A1Q8IVJ1 513 aa27.2■■□□□ 1.94
VEGFA-207ENST00000413642 APCDD1Q8J025 514 aa27.2■■□□□ 1.94
VEGFA-207ENST00000413642 SLC30A5Q8TAD4 765 aa27.2■■□□□ 1.94
VEGFA-207ENST00000413642 TTC17Q96AE7 1141 aa27.2■■□□□ 1.94
VEGFA-207ENST00000413642 SIPA1Q96FS4 1042 aa27.2■■□□□ 1.94
VEGFA-207ENST00000413642 ERGIC2Q96RQ1 377 aa27.2■■□□□ 1.94
VEGFA-207ENST00000413642 TBCBQ99426 244 aa27.2■■□□□ 1.94
VEGFA-207ENST00000413642 RTKNQ9BST9 563 aa27.2■■□□□ 1.94
VEGFA-207ENST00000413642 SNX10Q9Y5X0 201 aa27.2■■□□□ 1.94
VEGFA-207ENST00000413642 HS3ST4Q9Y661 456 aa27.2■■□□□ 1.94
VEGFA-207ENST00000413642 I6L893 689 aaPredicted RBP27.19■■□□□ 1.94
VEGFA-207ENST00000413642 TEX33O43247 280 aa27.19■■□□□ 1.94
VEGFA-207ENST00000413642 AP5Z1O43299 807 aa27.19■■□□□ 1.94
VEGFA-207ENST00000413642 PAGE1O75459 146 aa27.19■■□□□ 1.94
VEGFA-207ENST00000413642 ADCY5O95622 1261 aa27.19■■□□□ 1.94
VEGFA-207ENST00000413642 CENPCQ03188 943 aa27.19■■□□□ 1.94
VEGFA-207ENST00000413642 CAMK2GQ13555 558 aaPredicted RBP27.19■■□□□ 1.94
VEGFA-207ENST00000413642 AUHQ13825 339 aaKnown RBP27.19■■□□□ 1.94
VEGFA-207ENST00000413642 E2F5Q15329 346 aa27.19■■□□□ 1.94
VEGFA-207ENST00000413642 ZNF677Q86XU0 584 aa27.19■■□□□ 1.94
VEGFA-207ENST00000413642 MYO19Q96H55 970 aa27.19■■□□□ 1.94
VEGFA-207ENST00000413642 MRGPRX3Q96LB0 322 aa27.19■■□□□ 1.94
VEGFA-207ENST00000413642 NAT10Q9H0A0 1025 aaKnown RBP27.19■■□□□ 1.94
VEGFA-207ENST00000413642 PRSS16Q9NQE7 514 aa27.19■■□□□ 1.94
VEGFA-207ENST00000413642 ITM2CQ9NQX7 267 aa27.19■■□□□ 1.94
VEGFA-207ENST00000413642 TMPRSS4Q9NRS4 437 aa27.19■■□□□ 1.94
VEGFA-207ENST00000413642 SPAG17Q6Q759 2223 aa27.18■■□□□ 1.94
VEGFA-207ENST00000413642 MED19A0JLT2 244 aaPredicted RBP27.18■■□□□ 1.94
VEGFA-207ENST00000413642 SCNN1AP37088 669 aa27.18■■□□□ 1.94
VEGFA-207ENST00000413642 IRX4P78413 519 aa27.18■■□□□ 1.94
VEGFA-207ENST00000413642 ZNF33AQ06730 810 aa27.18■■□□□ 1.94
VEGFA-207ENST00000413642 STPG1Q5TH74 334 aa27.18■■□□□ 1.94
VEGFA-207ENST00000413642 METTL3Q86U44 580 aaKnown RBP27.18■■□□□ 1.94
VEGFA-207ENST00000413642 CCDC117Q8IWD4 279 aaPredicted RBP27.18■■□□□ 1.94
VEGFA-207ENST00000413642 CCAR2Q8N163 923 aaKnown RBP27.18■■□□□ 1.94
VEGFA-207ENST00000413642 ZNF557Q8N988 423 aaPredicted RBP27.18■■□□□ 1.94
VEGFA-207ENST00000413642 OR2T3Q8NH03 318 aa27.18■■□□□ 1.94
VEGFA-207ENST00000413642 PRCCQ92733 491 aaPredicted RBP27.18■■□□□ 1.94
VEGFA-207ENST00000413642 NT5C3BQ969T7 300 aa27.18■■□□□ 1.94
VEGFA-207ENST00000413642 SIK2Q9H0K1 926 aa27.18■■□□□ 1.94
VEGFA-207ENST00000413642 KIAA1522Q9P206 1035 aaPredicted RBP27.18■■□□□ 1.94
VEGFA-207ENST00000413642 USP36Q9P275 1121 aaKnown RBP27.18■■□□□ 1.94
VEGFA-207ENST00000413642 TMEM59LQ9UK28 342 aa27.18■■□□□ 1.94
VEGFA-207ENST00000413642 VANGL2Q9ULK5 521 aa27.18■■□□□ 1.94
VEGFA-207ENST00000413642 KHNYNO15037 678 aaKnown RBP27.17■■□□□ 1.94
VEGFA-207ENST00000413642 CXCR3P49682 368 aa27.17■■□□□ 1.94
VEGFA-207ENST00000413642 TPMTP51580 245 aa27.17■■□□□ 1.94
VEGFA-207ENST00000413642 SPDYCQ5MJ68 293 aa27.17■■□□□ 1.94
VEGFA-207ENST00000413642 SYT12Q8IV01 421 aa27.17■■□□□ 1.94
VEGFA-207ENST00000413642 EMC1Q8N766 993 aa27.17■■□□□ 1.94
VEGFA-207ENST00000413642 TOE1Q96GM8 510 aaKnown RBP27.17■■□□□ 1.94
VEGFA-207ENST00000413642 RPRD1AQ96P16 312 aaPredicted RBP27.17■■□□□ 1.94
VEGFA-207ENST00000413642 BPIFA3Q9BQP9 254 aa27.17■■□□□ 1.94
VEGFA-207ENST00000413642 FUCA2Q9BTY2 467 aa27.17■■□□□ 1.94
VEGFA-207ENST00000413642 EDEM2Q9BV94 578 aa27.17■■□□□ 1.94
VEGFA-207ENST00000413642 TKTL2Q9H0I9 626 aa27.17■■□□□ 1.94
VEGFA-207ENST00000413642 WSB2Q9NYS7 404 aaPredicted RBP27.17■■□□□ 1.94
VEGFA-207ENST00000413642 PILRBQ9UKJ0 227 aa27.17■■□□□ 1.94
VEGFA-207ENST00000413642 STAP1Q9ULZ2 295 aa27.17■■□□□ 1.94
VEGFA-207ENST00000413642 DAAM1Q9Y4D1 1078 aa27.17■■□□□ 1.94
VEGFA-207ENST00000413642 LNP1A1A4G5 178 aa27.16■■□□□ 1.94
VEGFA-207ENST00000413642 GJB6O95452 261 aa27.16■■□□□ 1.94
VEGFA-207ENST00000413642 PDGFRAP16234 1089 aa27.16■■□□□ 1.94
VEGFA-207ENST00000413642 MZF1P28698 734 aaPredicted RBP27.16■■□□□ 1.94
VEGFA-207ENST00000413642 CD6P30203 668 aa27.16■■□□□ 1.94
VEGFA-207ENST00000413642 DEUP1Q05D60 604 aa27.16■■□□□ 1.94
VEGFA-207ENST00000413642 PLEKHG6Q3KR16 790 aa27.16■■□□□ 1.94
VEGFA-207ENST00000413642 RAB6CQ53S08 254 aa27.16■■□□□ 1.94
VEGFA-207ENST00000413642 OR52K2Q8NGK3 314 aa27.16■■□□□ 1.94
VEGFA-207ENST00000413642 HSPA12BQ96MM6 686 aa27.16■■□□□ 1.94
VEGFA-207ENST00000413642 CFAP57Q96MR6 1250 aa27.16■■□□□ 1.94
VEGFA-207ENST00000413642 C11orf70Q9BRQ4 267 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms