RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 SF3A2Q15428 464 aaKnown RBP16.23■□□□□ 0.19
MCF2L-211ENST00000413354 CCDC6Q16204 474 aa16.23■□□□□ 0.19
MCF2L-211ENST00000413354 BRMS1LQ5PSV4 323 aa16.23■□□□□ 0.19
MCF2L-211ENST00000413354 XYLT1Q86Y38 959 aa16.23■□□□□ 0.19
MCF2L-211ENST00000413354 OR2T3Q8NH03 318 aa16.23■□□□□ 0.19
MCF2L-211ENST00000413354 CYB5D2Q8WUJ1 264 aa16.23■□□□□ 0.19
MCF2L-211ENST00000413354 PRCCQ92733 491 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-211ENST00000413354 ERLEC1Q96DZ1 483 aa16.23■□□□□ 0.19
MCF2L-211ENST00000413354 PGAP3Q96FM1 320 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-211ENST00000413354 SIPA1Q96FS4 1042 aa16.23■□□□□ 0.19
MCF2L-211ENST00000413354 NPY6RQ99463 290 aa16.23■□□□□ 0.19
MCF2L-211ENST00000413354 HSD3B7Q9H2F3 369 aa16.23■□□□□ 0.19
MCF2L-211ENST00000413354 TMEM245Q9H330 911 aa16.23■□□□□ 0.19
MCF2L-211ENST00000413354 CYP8B1Q9UNU6 501 aa16.23■□□□□ 0.19
MCF2L-211ENST00000413354 CACNA1AO00555 2505 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 A0A1B0GVM2 712 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 TCAF2A6NFQ2 919 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 SLC30A4O14863 429 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 NDUFS2O75306 463 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 CCDC172P0C7W6 258 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 ACADMP11310 421 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 RNASE9P60153 205 aaKnown RBP16.22■□□□□ 0.19
MCF2L-211ENST00000413354 FMO1Q01740 532 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 CAMK2GQ13555 558 aaPredicted RBP16.22■□□□□ 0.19
MCF2L-211ENST00000413354 SLC12A1Q13621 1099 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 KLHL40Q2TBA0 621 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 SLC25A52Q3SY17 297 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 FILIP1LQ4L180 1135 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 ACBD5Q5T8D3 534 aaPredicted RBP16.22■□□□□ 0.19
MCF2L-211ENST00000413354 ARCQ7LC44 396 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 APTXQ7Z2E3 356 aaKnown RBP16.22■□□□□ 0.19
MCF2L-211ENST00000413354 RABEPKQ7Z6M1 372 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 TMPRSS6Q8IU80 811 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 TMEFF1Q8IYR6 380 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 CFAP52Q8N1V2 620 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 KDM1BQ8NB78 822 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 SLC20A1Q8WUM9 679 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 CPA5Q8WXQ8 436 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 PIGKQ92643 395 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 TTC17Q96AE7 1141 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 MYEOVQ96EZ4 313 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 LMLNQ96KR4 655 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 PPP1R9BQ96SB3 815 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 PRMT1Q99873 361 aaKnown RBP16.22■□□□□ 0.19
MCF2L-211ENST00000413354 USP36Q9P275 1121 aaKnown RBP16.22■□□□□ 0.19
MCF2L-211ENST00000413354 SUN2Q9UH99 717 aa16.22■□□□□ 0.19
MCF2L-211ENST00000413354 DOCK4Q8N1I0 1966 aa16.21■□□□□ 0.19
MCF2L-211ENST00000413354 GOLGA8SH3BPF8 625 aa16.21■□□□□ 0.19
MCF2L-211ENST00000413354 KHNYNO15037 678 aaKnown RBP16.21■□□□□ 0.19
MCF2L-211ENST00000413354 CYP1A1P04798 512 aaPredicted RBP16.21■□□□□ 0.19
MCF2L-211ENST00000413354 SRPRAP08240 638 aaKnown RBP16.21■□□□□ 0.19
MCF2L-211ENST00000413354 ATP1A3P13637 1013 aa16.21■□□□□ 0.19
MCF2L-211ENST00000413354 HLA-EP13747 358 aa16.21■□□□□ 0.19
MCF2L-211ENST00000413354 CD6P30203 668 aa16.21■□□□□ 0.19
MCF2L-211ENST00000413354 OXTRP30559 389 aa16.21■□□□□ 0.19
MCF2L-211ENST00000413354 CSKP41240 450 aa16.21■□□□□ 0.19
MCF2L-211ENST00000413354 ZNF165P49910 485 aa16.21■□□□□ 0.19
MCF2L-211ENST00000413354 ATXN1P54253 815 aaKnown RBP16.21■□□□□ 0.19
MCF2L-211ENST00000413354 DEUP1Q05D60 604 aa16.21■□□□□ 0.19
MCF2L-211ENST00000413354 PTPRNQ16849 979 aa16.21■□□□□ 0.19
MCF2L-211ENST00000413354 PITRM1Q5JRX3 1037 aa16.21■□□□□ 0.19
MCF2L-211ENST00000413354 RNF219Q5W0B1 726 aaPredicted RBP16.21■□□□□ 0.19
MCF2L-211ENST00000413354 ARMCX6Q7L4S7 300 aa16.21■□□□□ 0.19
MCF2L-211ENST00000413354 SYT12Q8IV01 421 aa16.21■□□□□ 0.19
MCF2L-211ENST00000413354 DHX40Q8IX18 779 aaKnown RBP16.21■□□□□ 0.19
MCF2L-211ENST00000413354 FRMD1Q8N878 549 aa16.21■□□□□ 0.19
MCF2L-211ENST00000413354 FOXJ1Q92949 421 aa16.21■□□□□ 0.19
MCF2L-211ENST00000413354 NT5C3BQ969T7 300 aa16.21■□□□□ 0.19
MCF2L-211ENST00000413354 RPRD1AQ96P16 312 aaPredicted RBP16.21■□□□□ 0.19
MCF2L-211ENST00000413354 MKRN2Q9H000 416 aaKnown RBP16.21■□□□□ 0.19
MCF2L-211ENST00000413354 SLC6A17Q9H1V8 727 aa16.21■□□□□ 0.19
MCF2L-211ENST00000413354 SMOC1Q9H4F8 434 aa16.21■□□□□ 0.19
MCF2L-211ENST00000413354 WDCPQ9H6R7 721 aa16.21■□□□□ 0.19
MCF2L-211ENST00000413354 EVLQ9UI08 416 aaPredicted RBP16.21■□□□□ 0.19
MCF2L-211ENST00000413354 GDF9O60383 454 aa16.2■□□□□ 0.18
MCF2L-211ENST00000413354 MMP8P22894 467 aa16.2■□□□□ 0.18
MCF2L-211ENST00000413354 PTGER3P43115 390 aa16.2■□□□□ 0.18
MCF2L-211ENST00000413354 NSFP46459 744 aaKnown RBP16.2■□□□□ 0.18
MCF2L-211ENST00000413354 CXCR3P49682 368 aa16.2■□□□□ 0.18
MCF2L-211ENST00000413354 COPAP53621 1224 aa16.2■□□□□ 0.18
MCF2L-211ENST00000413354 SULT2A1Q06520 285 aa16.2■□□□□ 0.18
MCF2L-211ENST00000413354 ZNF33AQ06730 810 aa16.2■□□□□ 0.18
MCF2L-211ENST00000413354 AUHQ13825 339 aaKnown RBP16.2■□□□□ 0.18
MCF2L-211ENST00000413354 PLEKHG6Q3KR16 790 aa16.2■□□□□ 0.18
MCF2L-211ENST00000413354 OTUD1Q5VV17 481 aaPredicted RBP16.2■□□□□ 0.18
MCF2L-211ENST00000413354 IL31Q6EBC2 164 aa16.2■□□□□ 0.18
MCF2L-211ENST00000413354 FBXL22Q6P050 247 aa16.2■□□□□ 0.18
MCF2L-211ENST00000413354 CCAR2Q8N163 923 aaKnown RBP16.2■□□□□ 0.18
MCF2L-211ENST00000413354 CEP76Q8TAP6 659 aa16.2■□□□□ 0.18
MCF2L-211ENST00000413354 EDEM2Q9BV94 578 aa16.2■□□□□ 0.18
MCF2L-211ENST00000413354 NUSAP1Q9BXS6 441 aaKnown RBP16.2■□□□□ 0.18
MCF2L-211ENST00000413354 ITM2CQ9NQX7 267 aa16.2■□□□□ 0.18
MCF2L-211ENST00000413354 PIGVQ9NUD9 493 aa16.2■□□□□ 0.18
MCF2L-211ENST00000413354 ARHGEF38Q9NXL2 777 aa16.2■□□□□ 0.18
MCF2L-211ENST00000413354 MYO6Q9UM54 1294 aa16.2■□□□□ 0.18
MCF2L-211ENST00000413354 HS3ST4Q9Y661 456 aa16.2■□□□□ 0.18
MCF2L-211ENST00000413354 DCHS1Q96JQ0 3298 aa16.2■□□□□ 0.18
MCF2L-211ENST00000413354 PAGE1O75459 146 aa16.19■□□□□ 0.18
MCF2L-211ENST00000413354 IGLV3-19P01714 112 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms