RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 PSAT1Q9Y617 370 aa18.08■□□□□ 0.49
SDCBP-202ENST00000413219 STRNO43815 780 aa18.08■□□□□ 0.48
SDCBP-202ENST00000413219 DNAJA2O60884 412 aa18.08■□□□□ 0.48
SDCBP-202ENST00000413219 LGR5O75473 907 aa18.08■□□□□ 0.48
SDCBP-202ENST00000413219 TMCC1O94876 653 aa18.08■□□□□ 0.48
SDCBP-202ENST00000413219 CLPTM1O96005 669 aa18.08■□□□□ 0.48
SDCBP-202ENST00000413219 MCF2P10911 925 aa18.08■□□□□ 0.48
SDCBP-202ENST00000413219 RGS7P49802 495 aa18.08■□□□□ 0.48
SDCBP-202ENST00000413219 MBTD1Q05BQ5 628 aa18.08■□□□□ 0.48
SDCBP-202ENST00000413219 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.08■□□□□ 0.48
SDCBP-202ENST00000413219 SH2D4BQ5SQS7 431 aa18.08■□□□□ 0.48
SDCBP-202ENST00000413219 B3GNT6Q6ZMB0 384 aa18.08■□□□□ 0.48
SDCBP-202ENST00000413219 STON2Q8WXE9 905 aa18.08■□□□□ 0.48
SDCBP-202ENST00000413219 CENPIQ92674 756 aaPredicted RBP18.08■□□□□ 0.48
SDCBP-202ENST00000413219 DHX35Q9H5Z1 703 aaKnown RBP18.08■□□□□ 0.48
SDCBP-202ENST00000413219 ZNF696Q9H7X3 374 aa18.08■□□□□ 0.48
SDCBP-202ENST00000413219 CLIC5Q9NZA1 410 aa18.08■□□□□ 0.48
SDCBP-202ENST00000413219 DTLQ9NZJ0 730 aa18.08■□□□□ 0.48
SDCBP-202ENST00000413219 MGAMO43451 1857 aa18.08■□□□□ 0.48
SDCBP-202ENST00000413219 SPDYE16A6NNV3 312 aaPredicted RBP18.07■□□□□ 0.48
SDCBP-202ENST00000413219 HSPA4LO95757 839 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 TFAP2AP05549 437 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 MGAT1P26572 445 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 TBC1D25Q3MII6 688 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 HSP90AA5PQ58FG0 334 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 PPM1JQ5JR12 505 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 SPANXN3Q5MJ09 141 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 PMF1Q6P1K2 205 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 CDR2LQ86X02 465 aaPredicted RBP18.07■□□□□ 0.48
SDCBP-202ENST00000413219 TICAM1Q8IUC6 712 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 ADCY4Q8NFM4 1077 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 MPP4Q96JB8 637 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 CSPG4P5Q96PW8 444 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 C11orf84Q9BUA3 381 aaPredicted RBP18.07■□□□□ 0.48
SDCBP-202ENST00000413219 NFKBIZQ9BYH8 718 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 KPNA7A9QM74 516 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 VILLO15195 856 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 STK10O94804 968 aaKnown RBP18.07■□□□□ 0.48
SDCBP-202ENST00000413219 OR6B1O95007 311 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 TNFAIP8O95379 198 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 PGM3O95394 542 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 PMLP29590 882 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 HSPA13P48723 471 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 SERPINB8P50452 374 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 HK2P52789 917 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 ZNF280AP59817 542 aaPredicted RBP18.07■□□□□ 0.48
SDCBP-202ENST00000413219 CREB5Q02930 508 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 ADGRE1Q14246 886 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 CNGA3Q16281 694 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 NCBP2-AS2Q69YL0 99 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 PLPPR4Q7Z2D5 763 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 SETD3Q86TU7 594 aaPredicted RBP18.07■□□□□ 0.48
SDCBP-202ENST00000413219 COLGALT1Q8NBJ5 622 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 LENG1Q96BZ8 264 aaPredicted RBP18.07■□□□□ 0.48
SDCBP-202ENST00000413219 NMD3Q96D46 503 aaKnown RBP18.07■□□□□ 0.48
SDCBP-202ENST00000413219 LENG8Q96PV6 779 aaPredicted RBP18.07■□□□□ 0.48
SDCBP-202ENST00000413219 RNPEPQ9H4A4 650 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 PDZD7Q9H5P4 517 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 OCEL1Q9H607 264 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 SNX15Q9NRS6 342 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 PRMT7Q9NVM4 692 aaPredicted RBP18.07■□□□□ 0.48
SDCBP-202ENST00000413219 AP4E1Q9UPM8 1137 aa18.07■□□□□ 0.48
SDCBP-202ENST00000413219 RGSL1A5PLK6 1076 aa18.06■□□□□ 0.48
SDCBP-202ENST00000413219 ADCY6O43306 1168 aa18.06■□□□□ 0.48
SDCBP-202ENST00000413219 ZMPSTE24O75844 475 aa18.06■□□□□ 0.48
SDCBP-202ENST00000413219 POLBP06746 335 aa18.06■□□□□ 0.48
SDCBP-202ENST00000413219 SPATA31D3P0C874 917 aa18.06■□□□□ 0.48
SDCBP-202ENST00000413219 ADSLP30566 484 aaPredicted RBP18.06■□□□□ 0.48
SDCBP-202ENST00000413219 SESN2P58004 480 aaPredicted RBP18.06■□□□□ 0.48
SDCBP-202ENST00000413219 CRADDP78560 199 aa18.06■□□□□ 0.48
SDCBP-202ENST00000413219 PEX6Q13608 980 aa18.06■□□□□ 0.48
SDCBP-202ENST00000413219 KYAT1Q16773 422 aa18.06■□□□□ 0.48
SDCBP-202ENST00000413219 FAM187BQ17R55 369 aa18.06■□□□□ 0.48
SDCBP-202ENST00000413219 USP41Q3LFD5 358 aa18.06■□□□□ 0.48
SDCBP-202ENST00000413219 SLC9B1Q4ZJI4 515 aa18.06■□□□□ 0.48
SDCBP-202ENST00000413219 SPATA31D4Q6ZUB0 917 aa18.06■□□□□ 0.48
SDCBP-202ENST00000413219 TMEM130Q8N3G9 435 aa18.06■□□□□ 0.48
SDCBP-202ENST00000413219 ZNF781Q8N8C0 355 aa18.06■□□□□ 0.48
SDCBP-202ENST00000413219 LRGUKQ96M69 825 aa18.06■□□□□ 0.48
SDCBP-202ENST00000413219 KCTD15Q96SI1 283 aaPredicted RBP18.06■□□□□ 0.48
SDCBP-202ENST00000413219 TCF7L2Q9NQB0 619 aa18.06■□□□□ 0.48
SDCBP-202ENST00000413219 E9PBE3 544 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 PAPSS1O43252 624 aaPredicted RBP18.05■□□□□ 0.48
SDCBP-202ENST00000413219 KLHL41O60662 606 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 APBA3O96018 575 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 CAPNS1P04632 268 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 MPOP05164 745 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 SPRP35270 261 aaPredicted RBP18.05■□□□□ 0.48
SDCBP-202ENST00000413219 SCNN1AP37088 669 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 RBP5P82980 135 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 USP4Q13107 963 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 TTLL12Q14166 644 aaPredicted RBP18.05■□□□□ 0.48
SDCBP-202ENST00000413219 FRG1Q14331 258 aaKnown RBP18.05■□□□□ 0.48
SDCBP-202ENST00000413219 TMEM132DQ14C87 1099 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 RBM44Q6ZP01 1051 aaKnown RBP18.05■□□□□ 0.48
SDCBP-202ENST00000413219 EFCAB3Q8N7B9 438 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 KYQ8NBH2 561 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 RP9Q8TA86 221 aaKnown RBP18.05■□□□□ 0.48
SDCBP-202ENST00000413219 SLC35F5Q8WV83 523 aa18.05■□□□□ 0.48
SDCBP-202ENST00000413219 DLG3Q92796 817 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms