RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 HS3ST4Q9Y661 456 aa19.48■□□□□ 0.71
TRIM56-202ENST00000412507 ADAMTS9Q9P2N4 1935 aa19.48■□□□□ 0.71
TRIM56-202ENST00000412507 ZBTB24O43167 697 aaPredicted RBP19.47■□□□□ 0.71
TRIM56-202ENST00000412507 PAGE1O75459 146 aa19.47■□□□□ 0.71
TRIM56-202ENST00000412507 RHOBTB1O94844 696 aa19.47■□□□□ 0.71
TRIM56-202ENST00000412507 EPN2O95208 641 aa19.47■□□□□ 0.71
TRIM56-202ENST00000412507 GJB6O95452 261 aa19.47■□□□□ 0.71
TRIM56-202ENST00000412507 F9P00740 461 aa19.47■□□□□ 0.71
TRIM56-202ENST00000412507 CCDC172P0C7W6 258 aa19.47■□□□□ 0.71
TRIM56-202ENST00000412507 HLA-EP13747 358 aa19.47■□□□□ 0.71
TRIM56-202ENST00000412507 POLR2EP19388 210 aaKnown RBP19.47■□□□□ 0.71
TRIM56-202ENST00000412507 PRKCHP24723 683 aa19.47■□□□□ 0.71
TRIM56-202ENST00000412507 ATXN1P54253 815 aaKnown RBP19.47■□□□□ 0.71
TRIM56-202ENST00000412507 STARD3Q14849 445 aa19.47■□□□□ 0.71
TRIM56-202ENST00000412507 ELF2Q15723 593 aa19.47■□□□□ 0.71
TRIM56-202ENST00000412507 MAP7D1Q3KQU3 841 aa19.47■□□□□ 0.71
TRIM56-202ENST00000412507 FNDC3BQ53EP0 1204 aaKnown RBP19.47■□□□□ 0.71
TRIM56-202ENST00000412507 SERPINA13PQ6UXR4 307 aa19.47■□□□□ 0.71
TRIM56-202ENST00000412507 CIR1Q86X95 450 aaPredicted RBP19.47■□□□□ 0.71
TRIM56-202ENST00000412507 LOXL4Q96JB6 756 aa19.47■□□□□ 0.71
TRIM56-202ENST00000412507 TKTL2Q9H0I9 626 aa19.47■□□□□ 0.71
TRIM56-202ENST00000412507 SIK2Q9H0K1 926 aa19.47■□□□□ 0.71
TRIM56-202ENST00000412507 ARRDC1-AS1Q9H2J1 176 aa19.47■□□□□ 0.71
TRIM56-202ENST00000412507 ANLNQ9NQW6 1124 aa19.47■□□□□ 0.71
TRIM56-202ENST00000412507 ARHGEF38Q9NXL2 777 aa19.47■□□□□ 0.71
TRIM56-202ENST00000412507 ADAM22Q9P0K1 906 aa19.47■□□□□ 0.71
TRIM56-202ENST00000412507 INTS6Q9UL03 887 aaKnown RBP19.47■□□□□ 0.71
TRIM56-202ENST00000412507 VANGL2Q9ULK5 521 aa19.47■□□□□ 0.71
TRIM56-202ENST00000412507 PLA2G4CQ9UP65 541 aa19.47■□□□□ 0.71
TRIM56-202ENST00000412507 SYNCRIPO60506 623 aaKnown RBP19.46■□□□□ 0.71
TRIM56-202ENST00000412507 ATP5BP06576 529 aaKnown RBP19.46■□□□□ 0.71
TRIM56-202ENST00000412507 EPHX1P07099 455 aa19.46■□□□□ 0.71
TRIM56-202ENST00000412507 AUHQ13825 339 aaKnown RBP19.46■□□□□ 0.71
TRIM56-202ENST00000412507 PTPRNQ16849 979 aa19.46■□□□□ 0.71
TRIM56-202ENST00000412507 BRMS1LQ5PSV4 323 aa19.46■□□□□ 0.71
TRIM56-202ENST00000412507 RABGAP1LQ5R372 815 aa19.46■□□□□ 0.71
TRIM56-202ENST00000412507 PMS2CLQ68D20 193 aa19.46■□□□□ 0.71
TRIM56-202ENST00000412507 ARCQ7LC44 396 aa19.46■□□□□ 0.71
TRIM56-202ENST00000412507 C14orf80Q86SX3 495 aa19.46■□□□□ 0.71
TRIM56-202ENST00000412507 C11orf74Q86VG3 221 aa19.46■□□□□ 0.71
TRIM56-202ENST00000412507 PHF13Q86YI8 300 aaPredicted RBP19.46■□□□□ 0.71
TRIM56-202ENST00000412507 CCAR2Q8N163 923 aaKnown RBP19.46■□□□□ 0.71
TRIM56-202ENST00000412507 GPR161Q8N6U8 529 aaKnown RBP19.46■□□□□ 0.71
TRIM56-202ENST00000412507 ZNF366Q8N895 744 aa19.46■□□□□ 0.71
TRIM56-202ENST00000412507 JOSD2Q8TAC2 188 aa19.46■□□□□ 0.71
TRIM56-202ENST00000412507 IGSF8Q969P0 613 aa19.46■□□□□ 0.71
TRIM56-202ENST00000412507 SPACA7Q96KW9 195 aa19.46■□□□□ 0.71
TRIM56-202ENST00000412507 MRGPRX1Q96LB2 322 aa19.46■□□□□ 0.71
TRIM56-202ENST00000412507 RPRD1AQ96P16 312 aaPredicted RBP19.46■□□□□ 0.71
TRIM56-202ENST00000412507 TTYH3Q9C0H2 523 aa19.46■□□□□ 0.71
TRIM56-202ENST00000412507 TMPRSS4Q9NRS4 437 aa19.46■□□□□ 0.71
TRIM56-202ENST00000412507 SEMA4GQ9NTN9 838 aa19.46■□□□□ 0.71
TRIM56-202ENST00000412507 KIAA1522Q9P206 1035 aaPredicted RBP19.46■□□□□ 0.71
TRIM56-202ENST00000412507 MBD1Q9UIS9 605 aaPredicted RBP19.46■□□□□ 0.71
TRIM56-202ENST00000412507 CHD5Q8TDI0 1954 aa19.46■□□□□ 0.71
TRIM56-202ENST00000412507 I6L893 689 aaPredicted RBP19.45■□□□□ 0.7
TRIM56-202ENST00000412507 MAP3K13O43283 966 aa19.45■□□□□ 0.7
TRIM56-202ENST00000412507 LRP3O75074 770 aa19.45■□□□□ 0.7
TRIM56-202ENST00000412507 CALB1P05937 261 aa19.45■□□□□ 0.7
TRIM56-202ENST00000412507 DLDP09622 509 aaKnown RBP19.45■□□□□ 0.7
TRIM56-202ENST00000412507 TNFAIP3P21580 790 aa19.45■□□□□ 0.7
TRIM56-202ENST00000412507 CSKP41240 450 aa19.45■□□□□ 0.7
TRIM56-202ENST00000412507 IRAK1P51617 712 aa19.45■□□□□ 0.7
TRIM56-202ENST00000412507 UBASH3AP57075 661 aa19.45■□□□□ 0.7
TRIM56-202ENST00000412507 ATP11AP98196 1134 aa19.45■□□□□ 0.7
TRIM56-202ENST00000412507 MTA1Q13330 715 aa19.45■□□□□ 0.7
TRIM56-202ENST00000412507 BYSLQ13895 437 aaKnown RBP19.45■□□□□ 0.7
TRIM56-202ENST00000412507 CCDC6Q16204 474 aa19.45■□□□□ 0.7
TRIM56-202ENST00000412507 ASIC2Q16515 512 aa19.45■□□□□ 0.7
TRIM56-202ENST00000412507 PITRM1Q5JRX3 1037 aa19.45■□□□□ 0.7
TRIM56-202ENST00000412507 KIAA1324Q6UXG2 1013 aaKnown RBP19.45■□□□□ 0.7
TRIM56-202ENST00000412507 BNIPLQ7Z465 357 aa19.45■□□□□ 0.7
TRIM56-202ENST00000412507 RXFP2Q8WXD0 754 aa19.45■□□□□ 0.7
TRIM56-202ENST00000412507 TTC17Q96AE7 1141 aa19.45■□□□□ 0.7
TRIM56-202ENST00000412507 CYP8B1Q9UNU6 501 aa19.45■□□□□ 0.7
TRIM56-202ENST00000412507 SNX10Q9Y5X0 201 aa19.45■□□□□ 0.7
TRIM56-202ENST00000412507 A0A1B0GVM2 712 aa19.44■□□□□ 0.7
TRIM56-202ENST00000412507 TCAF2A6NFQ2 919 aa19.44■□□□□ 0.7
TRIM56-202ENST00000412507 PDGFRAP16234 1089 aa19.44■□□□□ 0.7
TRIM56-202ENST00000412507 GSCP56915 257 aaPredicted RBP19.44■□□□□ 0.7
TRIM56-202ENST00000412507 CDO1Q16878 200 aa19.44■□□□□ 0.7
TRIM56-202ENST00000412507 C15orf59Q2T9L4 293 aaPredicted RBP19.44■□□□□ 0.7
TRIM56-202ENST00000412507 RAB6CQ53S08 254 aa19.44■□□□□ 0.7
TRIM56-202ENST00000412507 TTC39BQ5VTQ0 682 aaPredicted RBP19.44■□□□□ 0.7
TRIM56-202ENST00000412507 SFMBT2Q5VUG0 894 aa19.44■□□□□ 0.7
TRIM56-202ENST00000412507 E4F1Q66K89 784 aaPredicted RBP19.44■□□□□ 0.7
TRIM56-202ENST00000412507 MON1BQ7L1V2 547 aa19.44■□□□□ 0.7
TRIM56-202ENST00000412507 APCDD1Q8J025 514 aa19.44■□□□□ 0.7
TRIM56-202ENST00000412507 SYT11Q9BT88 431 aa19.44■□□□□ 0.7
TRIM56-202ENST00000412507 SELENOOQ9BVL4 669 aa19.44■□□□□ 0.7
TRIM56-202ENST00000412507 MKRN2Q9H000 416 aaKnown RBP19.44■□□□□ 0.7
TRIM56-202ENST00000412507 RAB6CQ9H0N0 254 aa19.44■□□□□ 0.7
TRIM56-202ENST00000412507 TMEM245Q9H330 911 aa19.44■□□□□ 0.7
TRIM56-202ENST00000412507 PRDM16Q9HAZ2 1276 aa19.44■□□□□ 0.7
TRIM56-202ENST00000412507 CD93Q9NPY3 652 aa19.44■□□□□ 0.7
TRIM56-202ENST00000412507 PAXBP1Q9Y5B6 917 aa19.44■□□□□ 0.7
TRIM56-202ENST00000412507 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.43■□□□□ 0.7
TRIM56-202ENST00000412507 C2CD4BA6NLJ0 364 aa19.43■□□□□ 0.7
TRIM56-202ENST00000412507 ENDOD1O94919 500 aa19.43■□□□□ 0.7
TRIM56-202ENST00000412507 MOCS3O95396 460 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms