RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 ZNF827Q17R98 1081 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 CATSPERGQ6ZRH7 1159 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 UBLCP1Q8WVY7 318 aaPredicted RBP5.36□□□□□ -1.55
HERC4-205ENST00000412272 ATP2A3Q93084 1043 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 LRRC59Q96AG4 307 aaKnown RBP5.36□□□□□ -1.55
HERC4-205ENST00000412272 PTCD3Q96EY7 689 aaKnown RBP5.36□□□□□ -1.55
HERC4-205ENST00000412272 TRMT2BQ96GJ1 504 aaKnown RBP5.36□□□□□ -1.55
HERC4-205ENST00000412272 MFSD14AQ96MC6 490 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 C12orf57Q99622 126 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 DHX33Q9H6R0 707 aaKnown RBP5.36□□□□□ -1.55
HERC4-205ENST00000412272 TAB2Q9NYJ8 693 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 MAT2BQ9NZL9 334 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 KLQ9UEF7 1012 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.36□□□□□ -1.55
HERC4-205ENST00000412272 WDR91A4D1P6 747 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 A8MVJ9 347 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 TCP11X1B4DZS4 312 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 DENRO43583 198 aaKnown RBP5.36□□□□□ -1.55
HERC4-205ENST00000412272 ZWINTO95229 277 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 EDN3P14138 238 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 NPR3P17342 541 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 TGM1P22735 817 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 PMLP29590 882 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 RPIAP49247 311 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 CDK10Q15131 360 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 GRIK4Q16099 956 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 EARS2Q5JPH6 523 aaKnown RBP5.36□□□□□ -1.55
HERC4-205ENST00000412272 CDKL4Q5MAI5 379 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 VSTM1Q6UX27 236 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 MACC1Q6ZN28 852 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 FRA10AC1Q70Z53 315 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 CAMK1DQ8IU85 385 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 TP53I13Q8NBR0 393 aaPredicted RBP5.36□□□□□ -1.55
HERC4-205ENST00000412272 DAGLBQ8NCG7 672 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 ASZ1Q8WWH4 475 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 ZNF566Q969W8 418 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 TRIM43Q96BQ3 446 aaPredicted RBP5.36□□□□□ -1.55
HERC4-205ENST00000412272 MTMR8Q96EF0 704 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 ART5Q96L15 291 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 LRGUKQ96M69 825 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 RIC8BQ9NVN3 520 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 COQ3Q9NZJ6 369 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 DUSP12Q9UNI6 340 aa5.36□□□□□ -1.55
HERC4-205ENST00000412272 NOC2LQ9Y3T9 749 aaKnown RBP5.36□□□□□ -1.55
HERC4-205ENST00000412272 CFAP99D6REC4 459 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 TMX2-CTNND1H3BSU7 103 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 CDH1P12830 882 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 EPB42P16452 691 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 HK1P19367 917 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 AMPD1P23109 780 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 PRDX6P30041 224 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 AQP4P55087 323 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 RNF4P78317 190 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 MYBPC1Q00872 1141 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 AUHQ13825 339 aaKnown RBP5.35□□□□□ -1.55
HERC4-205ENST00000412272 ELOAQ14241 798 aaKnown RBP5.35□□□□□ -1.55
HERC4-205ENST00000412272 MFSD13AQ14CX5 517 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 LRRC41Q15345 812 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 KIZQ2M2Z5 673 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 INAVAQ3KP66 663 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 MIIPQ5JXC2 388 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 LIN54Q6MZP7 749 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 TYW1BQ6NUM6 668 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 ARSKQ6UWY0 536 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 FAM196AQ6ZSG2 479 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 IGFN1Q86VF2 1251 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 DIS3L2Q8IYB7 885 aaKnown RBP5.35□□□□□ -1.55
HERC4-205ENST00000412272 AHI1Q8N157 1196 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 AFAP1L2Q8N4X5 818 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 SLC15A4Q8N697 577 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 GLIS1Q8NBF1 620 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 MINDY2Q8NBR6 621 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 RNF139Q8WU17 664 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 WASF1Q92558 559 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 ATP6V1E2Q96A05 226 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 CITED4Q96RK1 184 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 SLC13A1Q9BZW2 595 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 ZCCHC2Q9C0B9 1178 aaKnown RBP5.35□□□□□ -1.55
HERC4-205ENST00000412272 MROH8Q9H579 483 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 GLRX2Q9NS18 164 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 VTI1BQ9UEU0 232 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 DNAJC12Q9UKB3 198 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 CDC14AQ9UNH5 594 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 ENTPD4Q9Y227 616 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 CBY1Q9Y3M2 126 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 RAD54BQ9Y620 910 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 SLC12A7Q9Y666 1083 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 DIP2CQ9Y2E4 1556 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 MYH10P35580 1976 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 SYNJ2BP-COX16A0A087WUM0 186 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 GAS2O43903 313 aaKnown RBP5.35□□□□□ -1.55
HERC4-205ENST00000412272 CBX6O95503 412 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 MMP1P03956 469 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 CCDC130P13994 396 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 ATP6V1B1P15313 513 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 HOXB8P17481 243 aaPredicted RBP5.35□□□□□ -1.55
HERC4-205ENST00000412272 RPA1P27694 616 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 GP5P40197 560 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 CAPZA2P47755 286 aa5.35□□□□□ -1.55
HERC4-205ENST00000412272 RAB14P61106 215 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms