RNA–Protein interactions for RNA: ENST00000411809.6

CLINT1-201, Transcript of clathrin interactor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLINT1, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-201ENST00000411809 CDC42EP1Q00587 391 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 DYNC1I2Q13409 638 aaKnown RBP13.39□□□□□ -0.27
CLINT1-201ENST00000411809 TFDP2Q14188 446 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 FAM110CQ1W6H9 321 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 RNF111Q6ZNA4 994 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 MARK2Q7KZI7 788 aaKnown RBP13.39□□□□□ -0.27
CLINT1-201ENST00000411809 MCUQ8NE86 351 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 CLEC4CQ8WTT0 213 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 SLC10A4Q96EP9 437 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 PPP1R36Q96LQ0 422 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 B3GNT5Q9BYG0 378 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 VCX3BQ9H321 246 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 NXF3Q9H4D5 531 aaKnown RBP13.39□□□□□ -0.27
CLINT1-201ENST00000411809 SPON1Q9HCB6 807 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 VCX3AQ9NNX9 186 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 DDX18Q9NVP1 670 aaKnown RBP13.39□□□□□ -0.27
CLINT1-201ENST00000411809 ADAMTS6Q9UKP5 1117 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 PLA2G4CQ9UP65 541 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 PLLPQ9Y342 182 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 NR2E3Q9Y5X4 410 aa13.39□□□□□ -0.27
CLINT1-201ENST00000411809 KCNN4O15554 427 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 ITM2AO43736 263 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 GCATO75600 419 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 DGKIO75912 1065 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 SNRPAP09012 282 aaKnown RBP13.38□□□□□ -0.27
CLINT1-201ENST00000411809 ZNF865P0CJ78 1059 aaPredicted RBP13.38□□□□□ -0.27
CLINT1-201ENST00000411809 ATP6V1B1P15313 513 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 TTLL12Q14166 644 aaPredicted RBP13.38□□□□□ -0.27
CLINT1-201ENST00000411809 ATG16L1Q676U5 607 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 SCYL2Q6P3W7 929 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 SCUBE3Q8IX30 993 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 ANKRD52Q8NB46 1076 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 DRAXINQ8NBI3 349 aaPredicted RBP13.38□□□□□ -0.27
CLINT1-201ENST00000411809 GDPD5Q8WTR4 605 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 PPP2R3CQ969Q6 453 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 FAM192AQ9GZU8 254 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 SMYD2Q9NRG4 433 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 FLRT1Q9NZU1 646 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 DNAJC16Q9Y2G8 782 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 PDE4DIPQ5VU43 2346 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 AXLP30530 894 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 SCNN1BP51168 640 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 BTKQ06187 659 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 SOX4Q06945 474 aaPredicted RBP13.38□□□□□ -0.27
CLINT1-201ENST00000411809 STX3Q13277 289 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 GSTA3Q16772 222 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 TTC39BQ5VTQ0 682 aaPredicted RBP13.38□□□□□ -0.27
CLINT1-201ENST00000411809 OR6B2Q6IFH4 312 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 HPS6Q86YV9 775 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 OR6J1Q8NGC5 347 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 MAGEB5Q9BZ81 275 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 ACSS2Q9NR19 701 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 MKS1Q9NXB0 559 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 DNAH12Q6ZR08 3092 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 A0A088AWK7 358 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 CREB3O43889 395 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 TOMM70O94826 608 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 F7P08709 466 aaPredicted RBP13.38□□□□□ -0.27
CLINT1-201ENST00000411809 CSH1P0DML2 217 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 CSH2P0DML3 217 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 EFHC1Q5JVL4 640 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 ZNF618Q5T7W0 954 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 OLFML2BQ68BL8 750 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 DHDDSQ86SQ9 333 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 SPATA24Q86W54 205 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 FAM81AQ8TBF8 368 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.38□□□□□ -0.27
CLINT1-201ENST00000411809 HIC2Q96JB3 615 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 FRMD8Q9BZ67 464 aaPredicted RBP13.38□□□□□ -0.27
CLINT1-201ENST00000411809 NRDE2Q9H7Z3 1164 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 RHBDL2Q9NX52 303 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 PAK5Q9P286 719 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 ZNF180Q9UJW8 692 aa13.38□□□□□ -0.27
CLINT1-201ENST00000411809 HBS1LQ9Y450 684 aaKnown RBP13.38□□□□□ -0.27
CLINT1-201ENST00000411809 SLC15A5A6NIM6 579 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 LMO2P25791 158 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 RGS7P49802 495 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 CRADDP78560 199 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 DNAL1Q4LDG9 190 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 PPP6R3Q5H9R7 873 aaPredicted RBP13.37□□□□□ -0.27
CLINT1-201ENST00000411809 WDR78Q5VTH9 848 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 NOTUMQ6P988 496 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 SMG8Q8ND04 991 aaKnown RBP13.37□□□□□ -0.27
CLINT1-201ENST00000411809 MPP4Q96JB8 637 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 QKIQ96PU8 341 aaKnown RBP eCLIP13.37□□□□□ -0.274e-7■□□□□ 8.4
CLINT1-201ENST00000411809 PREBQ9HCU5 417 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 S100A14Q9HCY8 104 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 SOX13Q9UN79 622 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 HES2Q9Y543 173 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 AK5Q9Y6K8 562 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 SCN10AQ9Y5Y9 1956 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 CCL15-CCL14A0A0B4J2E2 113 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 SMIM28A0A1B0GU29 152 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 HMX2A2RU54 273 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 F8W8V4 182 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 HNRNPRO43390 633 aaKnown RBP13.37□□□□□ -0.27
CLINT1-201ENST00000411809 PRPSAP2O60256 369 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 SPAG6O75602 509 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 RBL1P28749 1068 aa13.37□□□□□ -0.27
CLINT1-201ENST00000411809 TKTP29401 623 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms