RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 PRR31Q5SQ13 230 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 ZNF365Q70YC5 407 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 CHST3Q7LGC8 479 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 MOGAT3Q86VF5 341 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 GATAD2AQ86YP4 633 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 TDHQ8IZJ6 230 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 AOPEPQ8N6M6 819 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 CCDC89Q8N998 374 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 PCYOX1LQ8NBM8 494 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 OR56A3Q8NH54 315 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 IPO4Q8TEX9 1081 aaKnown RBP6.75□□□□□ -1.33
LSM5-203ENST00000409782 THAP4Q8WY91 577 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 RSC1A1Q92681 617 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 HDAC2Q92769 488 aaKnown RBP6.75□□□□□ -1.33
LSM5-203ENST00000409782 GCDHQ92947 438 aaPredicted RBP6.75□□□□□ -1.33
LSM5-203ENST00000409782 SDCCAG3Q96C92 435 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 PIGSQ96S52 555 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 PYM1Q9BRP8 204 aaKnown RBP6.75□□□□□ -1.33
LSM5-203ENST00000409782 FAM167BQ9BTA0 163 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 CNPPD1Q9BV87 410 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 WDR11Q9BZH6 1224 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 ENKD1Q9H0I2 346 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 VAT1LQ9HCJ6 419 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 PDGFCQ9NRA1 345 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 ING3Q9NXR8 418 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 NTMQ9P121 344 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 KIF17Q9P2E2 1029 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 SEC63Q9UGP8 760 aaKnown RBP6.75□□□□□ -1.33
LSM5-203ENST00000409782 CDC42EP3Q9UKI2 254 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 BAZ2BQ9UIF8 2168 aaKnown RBP6.75□□□□□ -1.33
LSM5-203ENST00000409782 FRMPD4Q14CM0 1322 aa6.75□□□□□ -1.33
LSM5-203ENST00000409782 B4E171 279 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 F5H0A9 414 aaPredicted RBP6.74□□□□□ -1.33
LSM5-203ENST00000409782 GCOM1H8Y6P7 765 aaPredicted RBP6.74□□□□□ -1.33
LSM5-203ENST00000409782 PJA2O43164 708 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 DNAJB5O75953 348 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 ITGA2BP08514 1039 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 POLR2MP0CAP2 368 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 EGR1P18146 543 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 HSPA4P34932 840 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 TSPAN7P41732 249 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 SLC11A2P49281 568 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 PAPOLAP51003 745 aaKnown RBP6.74□□□□□ -1.33
LSM5-203ENST00000409782 BEX3Q00994 111 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 MAPKAPK3Q16644 382 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 LRIT3Q3SXY7 679 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 ARHGEF16Q5VV41 709 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 AFMIDQ63HM1 303 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 CFAP161Q6P656 301 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 TMTC3Q6ZXV5 915 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 FRMD5Q7Z6J6 570 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 STK32CQ86UX6 486 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 OR6J1Q8NGC5 347 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 STYXQ8WUJ0 223 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 ZCCHC14Q8WYQ9 949 aaKnown RBP6.74□□□□□ -1.33
LSM5-203ENST00000409782 CFHR4Q92496 578 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 SCAMP4Q969E2 229 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 SPSB4Q96A44 273 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 RRP36Q96EU6 259 aaKnown RBP6.74□□□□□ -1.33
LSM5-203ENST00000409782 ZSWIM3Q96MP5 696 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 NEK1Q96PY6 1258 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 DDX23Q9BUQ8 820 aaKnown RBP6.74□□□□□ -1.33
LSM5-203ENST00000409782 SIK2Q9H0K1 926 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 KCNH6Q9H252 994 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 SLC6A15Q9H2J7 730 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 PXMP2Q9NR77 195 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 RBM28Q9NW13 759 aaKnown RBP6.74□□□□□ -1.33
LSM5-203ENST00000409782 CROTQ9UKG9 612 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 TBX21Q9UL17 535 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 DDX49Q9Y6V7 483 aaKnown RBP6.74□□□□□ -1.33
LSM5-203ENST00000409782 SCN10AQ9Y5Y9 1956 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 ARID1BQ8NFD5 2236 aaPredicted RBP6.74□□□□□ -1.33
LSM5-203ENST00000409782 DNAH12Q6ZR08 3092 aa6.74□□□□□ -1.33
LSM5-203ENST00000409782 NID2Q14112 1375 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 A0A087WZ62 844 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 SH3D21A4FU49 640 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 FFAR3O14843 346 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 CCP110O43303 1012 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 TOX4O94842 621 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 PLEKHA8P1O95397 391 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 NDST3O95803 873 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 CD4P01730 458 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 CKMT1AP12532 417 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 XRCC6P12956 609 aaKnown RBP eCLIP6.73□□□□□ -1.33
LSM5-203ENST00000409782 NPPBP16860 134 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 ZNF28P17035 718 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 BMP7P18075 431 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 CDK7P50613 346 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 NOMO3P69849 1222 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 PCOLCEQ15113 449 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 STXBP2Q15833 593 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 VWA3BQ502W6 1294 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 DCAF12L1Q5VU92 463 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 FAM180BQ6P0A1 224 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 KCNV1Q6PIU1 500 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 CXCL17Q6UXB2 119 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 DSTYKQ6XUX3 929 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 SYNE3Q6ZMZ3 975 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 KIAA0408Q6ZU52 694 aa6.73□□□□□ -1.33
LSM5-203ENST00000409782 HERC6Q8IVU3 1022 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms