RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 HAUS8Q9BT25 410 aa15.85■□□□□ 0.13
LIMS2-205ENST00000409455 RSL24D1Q9UHA3 163 aaKnown RBP15.85■□□□□ 0.13
LIMS2-205ENST00000409455 PADI4Q9UM07 663 aa15.85■□□□□ 0.13
LIMS2-205ENST00000409455 PRPF19Q9UMS4 504 aaKnown RBP15.85■□□□□ 0.13
LIMS2-205ENST00000409455 USP18Q9UMW8 372 aa15.85■□□□□ 0.13
LIMS2-205ENST00000409455 SH3GLB1Q9Y371 365 aa15.85■□□□□ 0.13
LIMS2-205ENST00000409455 STYXL1Q9Y6J8 313 aa15.85■□□□□ 0.13
LIMS2-205ENST00000409455 TRPA1O75762 1119 aa15.85■□□□□ 0.13
LIMS2-205ENST00000409455 MRPS22P82650 360 aaKnown RBP15.85■□□□□ 0.13
LIMS2-205ENST00000409455 FLOT2Q14254 428 aa15.85■□□□□ 0.13
LIMS2-205ENST00000409455 GK3PQ14409 553 aa15.85■□□□□ 0.13
LIMS2-205ENST00000409455 C6orf52Q5T4I8 152 aa15.85■□□□□ 0.13
LIMS2-205ENST00000409455 VWA5B1Q5TIE3 1220 aa15.85■□□□□ 0.13
LIMS2-205ENST00000409455 PAOXQ6QHF9 649 aa15.85■□□□□ 0.13
LIMS2-205ENST00000409455 PLPPR4Q7Z2D5 763 aa15.85■□□□□ 0.13
LIMS2-205ENST00000409455 FNDC8Q8TC99 324 aa15.85■□□□□ 0.13
LIMS2-205ENST00000409455 ACMSDQ8TDX5 336 aa15.85■□□□□ 0.13
LIMS2-205ENST00000409455 MSTO1Q9BUK6 570 aa15.85■□□□□ 0.13
LIMS2-205ENST00000409455 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.85■□□□□ 0.13
LIMS2-205ENST00000409455 FAF1Q9UNN5 650 aaPredicted RBP15.85■□□□□ 0.13
LIMS2-205ENST00000409455 MYOCOSA0A1B0GUC4 107 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 H3BSA7 217 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 ASS1P00966 412 aaKnown RBP15.84■□□□□ 0.13
LIMS2-205ENST00000409455 FAM163BP0C2L3 166 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 CPA3P15088 417 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 MMRN1Q13201 1228 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 ZBTB41Q5SVQ8 909 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 LRRC8BQ6P9F7 803 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 MAMDC4Q6UXC1 1216 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 PLEKHH3Q7Z736 793 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 SORT1Q99523 831 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 EMCNQ9ULC0 261 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 CEPT1Q9Y6K0 416 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 MAGEB3O15480 346 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 PLIN3O60664 434 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 ZBED1O96006 694 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 YY1P25490 414 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 ADCYAP1R1P41586 468 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 CDH6P55285 790 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 YWHAEP62258 255 aaKnown RBP15.84■□□□□ 0.13
LIMS2-205ENST00000409455 ARHGAP1Q07960 439 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 CBX3Q13185 183 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 PCLAFQ15004 111 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 KLHL35Q6PF15 583 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 C16orf89Q6UX73 402 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 ZNF467Q7Z7K2 595 aaPredicted RBP15.84■□□□□ 0.13
LIMS2-205ENST00000409455 ERI1Q8IV48 349 aaKnown RBP15.84■□□□□ 0.13
LIMS2-205ENST00000409455 CROCCP3Q8IVE0 287 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 TFAP2BQ92481 460 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 EBNA1BP2Q99848 306 aaKnown RBP15.84■□□□□ 0.13
LIMS2-205ENST00000409455 NIF3L1Q9GZT8 377 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 KATNBL1Q9H079 304 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 SDCBP2Q9H190 292 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.84■□□□□ 0.13
LIMS2-205ENST00000409455 TBCCD1Q9NVR7 557 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 RIMS3Q9UJD0 308 aa15.84■□□□□ 0.13
LIMS2-205ENST00000409455 ARID2Q68CP9 1835 aa15.83■□□□□ 0.13
LIMS2-205ENST00000409455 LRRIQ4A6NIV6 560 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 ZBTB42B2RXF5 422 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 MAFO75444 373 aaPredicted RBP15.83■□□□□ 0.12
LIMS2-205ENST00000409455 TRUB2O95900 331 aaKnown RBP15.83■□□□□ 0.12
LIMS2-205ENST00000409455 NUDT2P50583 147 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 CREB5Q02930 508 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 FAM182AQ5T1J6 154 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 AMIGO2Q86SJ2 522 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 C10orf107Q8IVU9 208 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 ZBTB8BQ8NAP8 495 aaPredicted RBP15.83■□□□□ 0.12
LIMS2-205ENST00000409455 HSPBAP1Q96EW2 488 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 ZBTB45Q96K62 511 aaPredicted RBP15.83■□□□□ 0.12
LIMS2-205ENST00000409455 FAM167AQ96KS9 214 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 HAPLN2Q9GZV7 340 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 COPS7BQ9H9Q2 264 aaPredicted RBP15.83■□□□□ 0.12
LIMS2-205ENST00000409455 TMEM165Q9HC07 324 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 VTA1Q9NP79 307 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 TJP2Q9UDY2 1190 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 PAIP2BQ9ULR5 123 aaKnown RBP15.83■□□□□ 0.12
LIMS2-205ENST00000409455 CNTNAP2Q9UHC6 1331 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 E9PBE3 544 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 KLHL41O60662 606 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 NAMPTP43490 491 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 ABCE1P61221 599 aaKnown RBP15.83■□□□□ 0.12
LIMS2-205ENST00000409455 KLF10Q13118 480 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 RGMBQ6NW40 437 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 DENND1BQ6P3S1 775 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 TICAM1Q8IUC6 712 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 NPLOC4Q8TAT6 608 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 RTP4Q96DX8 246 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 PHF12Q96QT6 1004 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 SMARCAD1Q9H4L7 1026 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 DCDC2Q9UHG0 476 aa15.83■□□□□ 0.12
LIMS2-205ENST00000409455 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.82■□□□□ 0.12
LIMS2-205ENST00000409455 MANSC4A6NHS7 340 aaPredicted RBP15.82■□□□□ 0.12
LIMS2-205ENST00000409455 ZNF195O14628 629 aa15.82■□□□□ 0.12
LIMS2-205ENST00000409455 TPP1O14773 563 aa15.82■□□□□ 0.12
LIMS2-205ENST00000409455 PSMC3P17980 439 aa15.82■□□□□ 0.12
LIMS2-205ENST00000409455 MAGEA6P43360 314 aa15.82■□□□□ 0.12
LIMS2-205ENST00000409455 LAMC2Q13753 1193 aa15.82■□□□□ 0.12
LIMS2-205ENST00000409455 ACAP1Q15027 740 aa15.82■□□□□ 0.12
LIMS2-205ENST00000409455 GALNT4Q8N4A0 578 aa15.82■□□□□ 0.12
LIMS2-205ENST00000409455 TRIML2Q8N7C3 387 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms