RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 TCAF2A6NFQ2 919 aa20.49■□□□□ 0.87
PDLIM2-207ENST00000409417 KLF8O95600 359 aaPredicted RBP20.49■□□□□ 0.87
PDLIM2-207ENST00000409417 CYP1A2P05177 515 aa20.49■□□□□ 0.87
PDLIM2-207ENST00000409417 SP9P0CG40 484 aa20.49■□□□□ 0.87
PDLIM2-207ENST00000409417 PABPC1P11940 636 aaKnown RBP20.49■□□□□ 0.87
PDLIM2-207ENST00000409417 TDGF1P13385 188 aa20.49■□□□□ 0.87
PDLIM2-207ENST00000409417 PSMA2P25787 234 aa20.49■□□□□ 0.87
PDLIM2-207ENST00000409417 HOXA6P31267 233 aa20.49■□□□□ 0.87
PDLIM2-207ENST00000409417 GGCXP38435 758 aa20.49■□□□□ 0.87
PDLIM2-207ENST00000409417 GALCP54803 685 aa20.49■□□□□ 0.87
PDLIM2-207ENST00000409417 LRRC31Q6UY01 552 aa20.49■□□□□ 0.87
PDLIM2-207ENST00000409417 TRMT11Q7Z4G4 463 aaKnown RBP20.49■□□□□ 0.87
PDLIM2-207ENST00000409417 KIAA0907Q7Z7F0 614 aaPredicted RBP20.49■□□□□ 0.87
PDLIM2-207ENST00000409417 ZNF683Q8IZ20 524 aa20.49■□□□□ 0.87
PDLIM2-207ENST00000409417 CCDC33Q8N5R6 958 aa20.49■□□□□ 0.87
PDLIM2-207ENST00000409417 WFIKKN2Q8TEU8 576 aa20.49■□□□□ 0.87
PDLIM2-207ENST00000409417 NTAN1Q96AB6 310 aa20.49■□□□□ 0.87
PDLIM2-207ENST00000409417 LMLNQ96KR4 655 aa20.49■□□□□ 0.87
PDLIM2-207ENST00000409417 FAM126AQ9BYI3 521 aaPredicted RBP20.49■□□□□ 0.87
PDLIM2-207ENST00000409417 TRIM7Q9C029 511 aa20.49■□□□□ 0.87
PDLIM2-207ENST00000409417 MMP17Q9ULZ9 603 aa20.49■□□□□ 0.87
PDLIM2-207ENST00000409417 SLC8A2Q9UPR5 921 aa20.49■□□□□ 0.87
PDLIM2-207ENST00000409417 H0Y626 953 aa20.48■□□□□ 0.87
PDLIM2-207ENST00000409417 K7ESF4 209 aa20.48■□□□□ 0.87
PDLIM2-207ENST00000409417 HNRNPLP14866 589 aaKnown RBP eCLIP20.48■□□□□ 0.87
PDLIM2-207ENST00000409417 CD70P32970 193 aa20.48■□□□□ 0.87
PDLIM2-207ENST00000409417 DMC1Q14565 340 aa20.48■□□□□ 0.87
PDLIM2-207ENST00000409417 EGFLAMQ63HQ2 1017 aa20.48■□□□□ 0.87
PDLIM2-207ENST00000409417 TMEM215Q68D42 235 aa20.48■□□□□ 0.87
PDLIM2-207ENST00000409417 TSSK4Q6SA08 328 aa20.48■□□□□ 0.87
PDLIM2-207ENST00000409417 ADIPOR2Q86V24 386 aa20.48■□□□□ 0.87
PDLIM2-207ENST00000409417 AHI1Q8N157 1196 aa20.48■□□□□ 0.87
PDLIM2-207ENST00000409417 CCAR2Q8N163 923 aaKnown RBP20.48■□□□□ 0.87
PDLIM2-207ENST00000409417 TXNDC5Q8NBS9 432 aaKnown RBP20.48■□□□□ 0.87
PDLIM2-207ENST00000409417 UCMAQ8WVF2 138 aa20.48■□□□□ 0.87
PDLIM2-207ENST00000409417 OSBPL2Q9H1P3 480 aa20.48■□□□□ 0.87
PDLIM2-207ENST00000409417 POLR3BQ9NW08 1133 aaPredicted RBP20.48■□□□□ 0.87
PDLIM2-207ENST00000409417 SNX10Q9Y5X0 201 aa20.48■□□□□ 0.87
PDLIM2-207ENST00000409417 IGLV3-10A0A075B6K4 115 aa20.47■□□□□ 0.87
PDLIM2-207ENST00000409417 DRGXA6NNA5 263 aa20.47■□□□□ 0.87
PDLIM2-207ENST00000409417 NPC1O15118 1278 aa20.47■□□□□ 0.87
PDLIM2-207ENST00000409417 ADAM23O75077 832 aa20.47■□□□□ 0.87
PDLIM2-207ENST00000409417 CLDN11O75508 207 aa20.47■□□□□ 0.87
PDLIM2-207ENST00000409417 NRG1Q02297 640 aaPredicted RBP20.47■□□□□ 0.87
PDLIM2-207ENST00000409417 SCAPQ12770 1279 aa20.47■□□□□ 0.87
PDLIM2-207ENST00000409417 E2F5Q15329 346 aa20.47■□□□□ 0.87
PDLIM2-207ENST00000409417 FSCBQ5H9T9 825 aa20.47■□□□□ 0.87
PDLIM2-207ENST00000409417 EOGTQ5NDL2 527 aa20.47■□□□□ 0.87
PDLIM2-207ENST00000409417 CHST9Q7L1S5 443 aa20.47■□□□□ 0.87
PDLIM2-207ENST00000409417 SLFN11Q7Z7L1 901 aa20.47■□□□□ 0.87
PDLIM2-207ENST00000409417 CIR1Q86X95 450 aaPredicted RBP20.47■□□□□ 0.87
PDLIM2-207ENST00000409417 CCDC185Q8N715 623 aa20.47■□□□□ 0.87
PDLIM2-207ENST00000409417 NELL1Q92832 810 aa20.47■□□□□ 0.87
PDLIM2-207ENST00000409417 CIPCQ9C0C6 399 aa20.47■□□□□ 0.87
PDLIM2-207ENST00000409417 ZDHHC4Q9NPG8 344 aa20.47■□□□□ 0.87
PDLIM2-207ENST00000409417 KIAA1522Q9P206 1035 aaPredicted RBP20.47■□□□□ 0.87
PDLIM2-207ENST00000409417 OR12D3Q9UGF7 316 aa20.47■□□□□ 0.87
PDLIM2-207ENST00000409417 E9PAM4 449 aa20.46■□□□□ 0.87
PDLIM2-207ENST00000409417 SGK1O00141 431 aa20.46■□□□□ 0.87
PDLIM2-207ENST00000409417 CDC25BP30305 580 aa20.46■□□□□ 0.87
PDLIM2-207ENST00000409417 NTSR1P30989 418 aa20.46■□□□□ 0.87
PDLIM2-207ENST00000409417 IRAK1P51617 712 aa20.46■□□□□ 0.87
PDLIM2-207ENST00000409417 DGKEP52429 567 aa20.46■□□□□ 0.87
PDLIM2-207ENST00000409417 NRLP54845 237 aa20.46■□□□□ 0.87
PDLIM2-207ENST00000409417 AIF1P55008 147 aa20.46■□□□□ 0.87
PDLIM2-207ENST00000409417 CDH4P55283 916 aa20.46■□□□□ 0.87
PDLIM2-207ENST00000409417 ZNF252P-AS1Q0IIN9 211 aa20.46■□□□□ 0.87
PDLIM2-207ENST00000409417 LMAN2Q12907 356 aa20.46■□□□□ 0.87
PDLIM2-207ENST00000409417 CRY1Q16526 586 aa20.46■□□□□ 0.87
PDLIM2-207ENST00000409417 ARTNQ5T4W7 220 aa20.46■□□□□ 0.87
PDLIM2-207ENST00000409417 SCYL2Q6P3W7 929 aa20.46■□□□□ 0.87
PDLIM2-207ENST00000409417 CHPFQ8IZ52 775 aa20.46■□□□□ 0.87
PDLIM2-207ENST00000409417 CAMKK1Q8N5S9 505 aa20.46■□□□□ 0.87
PDLIM2-207ENST00000409417 ATOH1Q92858 354 aaPredicted RBP20.46■□□□□ 0.87
PDLIM2-207ENST00000409417 PANX2Q96RD6 677 aa20.46■□□□□ 0.87
PDLIM2-207ENST00000409417 ACOX2Q99424 681 aa20.46■□□□□ 0.87
PDLIM2-207ENST00000409417 NUP85Q9BW27 656 aa20.46■□□□□ 0.87
PDLIM2-207ENST00000409417 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.45■□□□□ 0.86
PDLIM2-207ENST00000409417 SRGAP2O75044 1071 aa20.45■□□□□ 0.86
PDLIM2-207ENST00000409417 H2AFZP0C0S5 128 aa20.45■□□□□ 0.86
PDLIM2-207ENST00000409417 OXCT1P55809 520 aa20.45■□□□□ 0.86
PDLIM2-207ENST00000409417 ZNF177Q13360 481 aaPredicted RBP20.45■□□□□ 0.86
PDLIM2-207ENST00000409417 SDE2Q6IQ49 451 aa20.45■□□□□ 0.86
PDLIM2-207ENST00000409417 H2AFVQ71UI9 128 aa20.45■□□□□ 0.86
PDLIM2-207ENST00000409417 CTNNBL1Q8WYA6 563 aaPredicted RBP20.45■□□□□ 0.86
PDLIM2-207ENST00000409417 ARHGEF26Q96DR7 871 aa20.45■□□□□ 0.86
PDLIM2-207ENST00000409417 PACSIN1Q9BY11 444 aa20.45■□□□□ 0.86
PDLIM2-207ENST00000409417 SPTLC3Q9NUV7 552 aa20.45■□□□□ 0.86
PDLIM2-207ENST00000409417 ZSCAN32Q9NX65 697 aa20.45■□□□□ 0.86
PDLIM2-207ENST00000409417 THAP10Q9P2Z0 257 aaPredicted RBP20.45■□□□□ 0.86
PDLIM2-207ENST00000409417 PPARGC1AQ9UBK2 798 aaKnown RBP20.45■□□□□ 0.86
PDLIM2-207ENST00000409417 RNF8O76064 485 aa20.44■□□□□ 0.86
PDLIM2-207ENST00000409417 ATP5BP06576 529 aaKnown RBP20.44■□□□□ 0.86
PDLIM2-207ENST00000409417 POLR2EP19388 210 aaKnown RBP20.44■□□□□ 0.86
PDLIM2-207ENST00000409417 SLC12A1Q13621 1099 aa20.44■□□□□ 0.86
PDLIM2-207ENST00000409417 ACAP1Q15027 740 aa20.44■□□□□ 0.86
PDLIM2-207ENST00000409417 FUT11Q495W5 492 aa20.44■□□□□ 0.86
PDLIM2-207ENST00000409417 EFHC2Q5JST6 749 aa20.44■□□□□ 0.86
PDLIM2-207ENST00000409417 MBLAC2Q68D91 279 aa20.44■□□□□ 0.86
PDLIM2-207ENST00000409417 CXorf57Q6NSI4 855 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms