RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 B3GNT9Q6UX72 402 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 CATIPQ7Z7H3 387 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 FAM129CQ86XR2 697 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 LRRC34Q8IZ02 419 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 SPICE1Q8N0Z3 855 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 TMTC2Q8N394 836 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 NELFBQ8WX92 580 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 FAM136AQ96C01 138 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 HAUS1Q96CS2 278 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 PAGE5Q96GU1 130 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 FAM81BQ96LP2 452 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 WDR92Q96MX6 357 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 MED15Q96RN5 788 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 NUDCD1Q96RS6 583 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 KRT12Q99456 494 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 SELENOSQ9BQE4 189 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 TUBB6Q9BUF5 446 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 ADI1Q9BV57 179 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 TMEM109Q9BVC6 243 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 SPATA16Q9BXB7 569 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 OSBPL6Q9BZF3 934 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 ABCF3Q9NUQ8 709 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 TMOD4Q9NZQ9 345 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 TUBGCP4Q9UGJ1 667 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 CDC42EP3Q9UKI2 254 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 FZD1Q9UP38 647 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 A0A0G2JMZ2 1700 aa5.72□□□□□ -1.49
CLK1-202ENST00000409403 MAST4O15021 2626 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 PLXNA1Q9UIW2 1896 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 KLRG2A4D1S0 409 aaPredicted RBP5.71□□□□□ -1.5
CLK1-202ENST00000409403 ERVV-2B6SEH9 535 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 F8VZ95 297 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 PSMA7O14818 248 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 RGS16O15492 202 aaPredicted RBP5.71□□□□□ -1.5
CLK1-202ENST00000409403 AKR1B10O60218 316 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 PEX11AO75192 247 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 DCTN3O75935 186 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 KLHL18O94889 574 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 HNRNPCP07910 306 aaKnown RBP eCLIP5.71□□□□□ -1.5
CLK1-202ENST00000409403 ZNF28P17035 718 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 XBP1P17861 261 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 RGS2P41220 211 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 WASP42768 502 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 MCAMP43121 646 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 ETV4P43268 484 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 MAGEA1P43355 309 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 PDE1BQ01064 536 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 TOP3AQ13472 1001 aaPredicted RBP5.71□□□□□ -1.5
CLK1-202ENST00000409403 RCN2Q14257 317 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 ZNF267Q14586 743 aaPredicted RBP5.71□□□□□ -1.5
CLK1-202ENST00000409403 TNIP1Q15025 636 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 SLC44A4Q53GD3 710 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 ATAT1Q5SQI0 421 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 DAB2IPQ5VWQ8 1189 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 DENND2CQ68D51 928 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 CNKSR3Q6P9H4 555 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 NCCRP1Q6ZVX7 275 aaPredicted RBP5.71□□□□□ -1.5
CLK1-202ENST00000409403 ATP11CQ8NB49 1132 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 LINS1Q8NG48 757 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 LRRC8CQ8TDW0 803 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 PRCCQ92733 491 aaPredicted RBP5.71□□□□□ -1.5
CLK1-202ENST00000409403 HPS3Q969F9 1004 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 TAAR9Q96RI9 348 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 ERGIC2Q96RQ1 377 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 PTPN18Q99952 460 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 TTYH3Q9C0H2 523 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 TMEM165Q9HC07 324 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 SPATA6Q9NWH7 488 aaPredicted RBP5.71□□□□□ -1.5
CLK1-202ENST00000409403 DBF4Q9UBU7 674 aaPredicted RBP5.71□□□□□ -1.5
CLK1-202ENST00000409403 CNOT8Q9UFF9 292 aaKnown RBP5.71□□□□□ -1.5
CLK1-202ENST00000409403 FBXL5Q9UKA1 691 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 BARX2Q9UMQ3 279 aaPredicted RBP5.71□□□□□ -1.5
CLK1-202ENST00000409403 AGAP1Q9UPQ3 857 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 DNM3Q9UQ16 869 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 TMEM98Q9Y2Y6 226 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 UTP11Q9Y3A2 253 aaKnown RBP5.71□□□□□ -1.5
CLK1-202ENST00000409403 XIRP2A4UGR9 3374 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 COL4A6Q14031 1691 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 TRANK1O15050 2925 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 ATP8B3O60423 1300 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 ABCB11O95342 1321 aa5.71□□□□□ -1.5
CLK1-202ENST00000409403 FLT4P35916 1363 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 NID2Q14112 1375 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 A0A1B0GVG6 124 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 PI4KAP2A4QPH2 592 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 GRM8O00222 908 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 PGRMC1O00264 195 aaKnown RBP5.7□□□□□ -1.5
CLK1-202ENST00000409403 RAD51CO43502 376 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 MOCS3O95396 460 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 FGFR1OPO95684 399 aaKnown RBP5.7□□□□□ -1.5
CLK1-202ENST00000409403 MMP1P03956 469 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 HMGCRP04035 888 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 HSPD1P10809 573 aaKnown RBP5.7□□□□□ -1.5
CLK1-202ENST00000409403 CDC25AP30304 524 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 PTDSS1P48651 473 aaKnown RBP5.7□□□□□ -1.5
CLK1-202ENST00000409403 INHBCP55103 352 aa5.7□□□□□ -1.5
CLK1-202ENST00000409403 MEF2AQ02078 507 aaPredicted RBP5.7□□□□□ -1.5
CLK1-202ENST00000409403 RNASELQ05823 741 aaKnown RBP5.7□□□□□ -1.5
CLK1-202ENST00000409403 AIMP1Q12904 312 aaKnown RBP5.7□□□□□ -1.5
CLK1-202ENST00000409403 CYLC2Q14093 348 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms