RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 CCNG2Q16589 344 aa17.35■□□□□ 0.37
SSB-202ENST00000409333 ADGRF1Q5T601 910 aa17.35■□□□□ 0.37
SSB-202ENST00000409333 CCDC137Q6PK04 289 aaKnown RBP17.35■□□□□ 0.37
SSB-202ENST00000409333 TMCO3Q6UWJ1 677 aa17.35■□□□□ 0.37
SSB-202ENST00000409333 LRRC31Q6UY01 552 aa17.35■□□□□ 0.37
SSB-202ENST00000409333 NPAS3Q8IXF0 933 aa17.35■□□□□ 0.37
SSB-202ENST00000409333 LGI2Q8N0V4 545 aa17.35■□□□□ 0.37
SSB-202ENST00000409333 CCDC33Q8N5R6 958 aa17.35■□□□□ 0.37
SSB-202ENST00000409333 NPWQ8N729 165 aa17.35■□□□□ 0.37
SSB-202ENST00000409333 MYRIPQ8NFW9 859 aa17.35■□□□□ 0.37
SSB-202ENST00000409333 SH3RF2Q8TEC5 729 aa17.35■□□□□ 0.37
SSB-202ENST00000409333 P3H4Q92791 437 aa17.35■□□□□ 0.37
SSB-202ENST00000409333 RPRD1AQ96P16 312 aaPredicted RBP17.35■□□□□ 0.37
SSB-202ENST00000409333 TDP1Q9NUW8 608 aa17.35■□□□□ 0.37
SSB-202ENST00000409333 STIM2Q9P246 746 aa17.35■□□□□ 0.37
SSB-202ENST00000409333 AMACRQ9UHK6 382 aa17.35■□□□□ 0.37
SSB-202ENST00000409333 ZMYM5Q9UJ78 669 aa17.35■□□□□ 0.37
SSB-202ENST00000409333 FGF10O15520 208 aaPredicted RBP17.34■□□□□ 0.37
SSB-202ENST00000409333 LIASO43766 372 aa17.34■□□□□ 0.37
SSB-202ENST00000409333 CNTN5O94779 1100 aa17.34■□□□□ 0.37
SSB-202ENST00000409333 ZFXP17010 805 aaPredicted RBP17.34■□□□□ 0.37
SSB-202ENST00000409333 CHRNA3P32297 505 aa17.34■□□□□ 0.37
SSB-202ENST00000409333 COILP38432 576 aaPredicted RBP17.34■□□□□ 0.37
SSB-202ENST00000409333 SGSHP51688 502 aa17.34■□□□□ 0.37
SSB-202ENST00000409333 NAA30Q147X3 362 aaPredicted RBP17.34■□□□□ 0.37
SSB-202ENST00000409333 COL19A1Q14993 1142 aa17.34■□□□□ 0.37
SSB-202ENST00000409333 PAFAH1B3Q15102 231 aaKnown RBP17.34■□□□□ 0.37
SSB-202ENST00000409333 NOMO1Q15155 1222 aa17.34■□□□□ 0.37
SSB-202ENST00000409333 ALFQ53S48 1182 aa17.34■□□□□ 0.37
SSB-202ENST00000409333 ACBD5Q5T8D3 534 aaPredicted RBP17.34■□□□□ 0.37
SSB-202ENST00000409333 Q7L0L9 218 aa17.34■□□□□ 0.37
SSB-202ENST00000409333 CIR1Q86X95 450 aaPredicted RBP17.34■□□□□ 0.37
SSB-202ENST00000409333 ARID3BQ8IVW6 561 aaPredicted RBP17.34■□□□□ 0.37
SSB-202ENST00000409333 BBS7Q8IWZ6 715 aa17.34■□□□□ 0.37
SSB-202ENST00000409333 TP53INP2Q8IXH6 220 aa17.34■□□□□ 0.37
SSB-202ENST00000409333 CFAP52Q8N1V2 620 aa17.34■□□□□ 0.37
SSB-202ENST00000409333 TTC13Q8NBP0 860 aa17.34■□□□□ 0.37
SSB-202ENST00000409333 ZSCAN18Q8TBC5 510 aaPredicted RBP17.34■□□□□ 0.37
SSB-202ENST00000409333 FGF13Q92913 245 aa17.34■□□□□ 0.37
SSB-202ENST00000409333 PRICKLE1Q96MT3 831 aaPredicted RBP17.34■□□□□ 0.37
SSB-202ENST00000409333 ZYG11BQ9C0D3 744 aa17.34■□□□□ 0.37
SSB-202ENST00000409333 NDFIP2Q9NV92 336 aa17.34■□□□□ 0.37
SSB-202ENST00000409333 DTLQ9NZJ0 730 aa17.34■□□□□ 0.37
SSB-202ENST00000409333 PPARGC1AQ9UBK2 798 aaKnown RBP17.34■□□□□ 0.37
SSB-202ENST00000409333 STOML2Q9UJZ1 356 aa17.34■□□□□ 0.37
SSB-202ENST00000409333 LSM7Q9UK45 103 aaKnown RBP17.34■□□□□ 0.37
SSB-202ENST00000409333 RAD51CO43502 376 aa17.33■□□□□ 0.37
SSB-202ENST00000409333 LATS1O95835 1130 aa17.33■□□□□ 0.37
SSB-202ENST00000409333 VCPP55072 806 aaKnown RBP17.33■□□□□ 0.37
SSB-202ENST00000409333 HTR3DQ70Z44 454 aa17.33■□□□□ 0.37
SSB-202ENST00000409333 B4GALNT4Q76KP1 1039 aa17.33■□□□□ 0.37
SSB-202ENST00000409333 NLRP14Q86W24 1093 aa17.33■□□□□ 0.37
SSB-202ENST00000409333 SLC35B2Q8TB61 432 aa17.33■□□□□ 0.37
SSB-202ENST00000409333 LRRN4Q8WUT4 740 aa17.33■□□□□ 0.37
SSB-202ENST00000409333 PABPC5Q96DU9 382 aaKnown RBP17.33■□□□□ 0.37
SSB-202ENST00000409333 MSLNLQ96KJ4 702 aa17.33■□□□□ 0.37
SSB-202ENST00000409333 LRRC1Q9BTT6 524 aa17.33■□□□□ 0.37
SSB-202ENST00000409333 CATSPERBQ9H7T0 1116 aa17.33■□□□□ 0.37
SSB-202ENST00000409333 C10orf88Q9H8K7 445 aa17.33■□□□□ 0.37
SSB-202ENST00000409333 PRDM16Q9HAZ2 1276 aa17.33■□□□□ 0.37
SSB-202ENST00000409333 HOMER3Q9NSC5 361 aa17.33■□□□□ 0.37
SSB-202ENST00000409333 MIA3Q5JRA6 1907 aa17.33■□□□□ 0.36
SSB-202ENST00000409333 DRGXA6NNA5 263 aa17.33■□□□□ 0.36
SSB-202ENST00000409333 TSPAN3O60637 253 aa17.33■□□□□ 0.36
SSB-202ENST00000409333 EIF3EP60228 445 aaKnown RBP17.33■□□□□ 0.36
SSB-202ENST00000409333 BYSLQ13895 437 aaKnown RBP17.33■□□□□ 0.36
SSB-202ENST00000409333 OASLQ15646 514 aaKnown RBP17.33■□□□□ 0.36
SSB-202ENST00000409333 ZNF77Q15935 545 aa17.33■□□□□ 0.36
SSB-202ENST00000409333 ERCC6LQ2NKX8 1250 aa17.33■□□□□ 0.36
SSB-202ENST00000409333 C5orf22Q49AR2 442 aa17.33■□□□□ 0.36
SSB-202ENST00000409333 CES5AQ6NT32 575 aa17.33■□□□□ 0.36
SSB-202ENST00000409333 C8orf74Q6P047 294 aa17.33■□□□□ 0.36
SSB-202ENST00000409333 TFAP2DQ7Z6R9 452 aa17.33■□□□□ 0.36
SSB-202ENST00000409333 ZC3H18Q86VM9 953 aaKnown RBP17.33■□□□□ 0.36
SSB-202ENST00000409333 DDX42Q86XP3 938 aaKnown RBP eCLIP17.33■□□□□ 0.36
SSB-202ENST00000409333 KLC2Q9H0B6 622 aa17.33■□□□□ 0.36
SSB-202ENST00000409333 EPC1Q9H2F5 836 aa17.33■□□□□ 0.36
SSB-202ENST00000409333 PCYOX1Q9UHG3 505 aa17.33■□□□□ 0.36
SSB-202ENST00000409333 ZFP37Q9Y6Q3 630 aaPredicted RBP17.33■□□□□ 0.36
SSB-202ENST00000409333 MCF2LO15068 1137 aa17.32■□□□□ 0.36
SSB-202ENST00000409333 RHOXF2BP0C7M4 288 aa17.32■□□□□ 0.36
SSB-202ENST00000409333 RHOQP17081 205 aa17.32■□□□□ 0.36
SSB-202ENST00000409333 FNTAP49354 379 aa17.32■□□□□ 0.36
SSB-202ENST00000409333 RPS24P62847 133 aaKnown RBP17.32■□□□□ 0.36
SSB-202ENST00000409333 USP4Q13107 963 aa17.32■□□□□ 0.36
SSB-202ENST00000409333 ATAT1Q5SQI0 421 aa17.32■□□□□ 0.36
SSB-202ENST00000409333 DRICH1Q6PGQ1 229 aaPredicted RBP17.32■□□□□ 0.36
SSB-202ENST00000409333 FAM217AQ8IXS0 508 aa17.32■□□□□ 0.36
SSB-202ENST00000409333 CCDC105Q8IYK2 499 aa17.32■□□□□ 0.36
SSB-202ENST00000409333 RTL3Q8N8U3 475 aaKnown RBP17.32■□□□□ 0.36
SSB-202ENST00000409333 CELF6Q96J87 481 aaKnown RBP17.32■□□□□ 0.36
SSB-202ENST00000409333 CCDC114Q96M63 670 aa17.32■□□□□ 0.36
SSB-202ENST00000409333 OLFM3Q96PB7 478 aa17.32■□□□□ 0.36
SSB-202ENST00000409333 RHOXF2Q9BQY4 288 aa17.32■□□□□ 0.36
SSB-202ENST00000409333 ZNF212Q9UDV6 495 aa17.32■□□□□ 0.36
SSB-202ENST00000409333 PRUNE2Q8WUY3 3088 aa17.32■□□□□ 0.36
SSB-202ENST00000409333 E2F8A0AVK6 867 aa17.31■□□□□ 0.36
SSB-202ENST00000409333 WASH4PA8MWX3 477 aa17.31■□□□□ 0.36
SSB-202ENST00000409333 TTI1O43156 1089 aa17.31■□□□□ 0.36
SSB-202ENST00000409333 RBP3P10745 1247 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms