RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 COL9A2Q14055 689 aaPredicted RBP8.54□□□□□ -1.04
SNX13-201ENST00000409076 RPS6KA2Q15349 733 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 DALRD3Q5D0E6 543 aaKnown RBP8.54□□□□□ -1.04
SNX13-201ENST00000409076 FOXB2Q5VYV0 432 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 TFAP2DQ7Z6R9 452 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 SCN4BQ8IWT1 228 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 RTKN2Q8IZC4 609 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 PDCD6IPQ8WUM4 868 aaKnown RBP8.54□□□□□ -1.04
SNX13-201ENST00000409076 NKD2Q969F2 451 aaPredicted RBP8.54□□□□□ -1.04
SNX13-201ENST00000409076 ALKBH8Q96BT7 664 aaKnown RBP8.54□□□□□ -1.04
SNX13-201ENST00000409076 FBXL18Q96ME1 805 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 EIF2AQ9BY44 585 aaKnown RBP8.54□□□□□ -1.04
SNX13-201ENST00000409076 HOXC10Q9NYD6 342 aa8.54□□□□□ -1.04
SNX13-201ENST00000409076 COL22A1Q8NFW1 1626 aaPredicted RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 DLEC1Q9Y238 1755 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 EEF2KO00418 725 aaKnown RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 DYNC1LI2O43237 492 aaPredicted RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 MSCO60682 206 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 ENDOD1O94919 500 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 MT-CYBP00156 380 aaPredicted RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 ITGA2BP08514 1039 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 CYP3A5P20815 502 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 TPD52P55327 224 aaPredicted RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 PDK3Q15120 406 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 CNPY1Q3B7I2 92 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 DDIASQ8IXT1 998 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 ADGRF2Q8IZF7 708 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 HTR3CQ8WXA8 447 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 SREK1Q8WXA9 508 aaKnown RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 UBE2OQ9C0C9 1292 aaKnown RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 MRPL46Q9H2W6 279 aaKnown RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 POPDC2Q9HBU9 364 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 ADGRA2Q96PE1 1338 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 CNTRLQ7Z7A1 2325 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 KIF3CO14782 793 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 DDNO94850 711 aaPredicted RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 STIP1P31948 543 aaKnown RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 GARSP41250 739 aaKnown RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 TPI1P60174 286 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 FOLH1Q04609 750 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 PDAP1Q13442 181 aaKnown RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 STILQ15468 1287 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 TNFAIP8L3Q5GJ75 292 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 SLC9A4Q6AI14 798 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 HFE2Q6ZVN8 426 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 TTC30AQ86WT1 665 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 CDKL3Q8IVW4 592 aaPredicted RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 DENND6AQ8IWF6 608 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 MAPK15Q8TD08 544 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 GPR152Q8TDT2 470 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 CYGBQ8WWM9 190 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 PABPC5Q96DU9 382 aaKnown RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 ZFP42Q96MM3 310 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 KCTD15Q96SI1 283 aaPredicted RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 CYP2S1Q96SQ9 504 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 HAUS8Q9BT25 410 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 DHX33Q9H6R0 707 aaKnown RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 SNX15Q9NRS6 342 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 BFARQ9NZS9 450 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 PIM2Q9P1W9 311 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 DOLKQ9UPQ8 538 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 DRG1Q9Y295 367 aaKnown RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 FARP1Q9Y4F1 1045 aaPredicted RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 GON4LQ3T8J9 2241 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 RNF103-CHMP3A0A140T963 221 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 SOWAHBA6NEL2 793 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 SLC26A4O43511 780 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 BNIP3LO60238 219 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 RFPL1O75677 317 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 HNRNPCP07910 306 aaKnown RBP eCLIP8.53□□□□□ -1.04
SNX13-201ENST00000409076 USP17L7P0C7H9 530 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 ACADSP16219 412 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 XRCC1P18887 633 aaPredicted RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 EIF4BP23588 611 aaKnown RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 INHBEP58166 350 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 MPP1Q00013 466 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 DBN1Q16643 649 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 PACS1Q6VY07 963 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 TRIM67Q6ZTA4 783 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 CHST15Q7LFX5 561 aaPredicted RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 DHDDSQ86SQ9 333 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 TRIM42Q8IWZ5 723 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 ESAMQ96AP7 390 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 PTCD3Q96EY7 689 aaKnown RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 P2RY11Q96G91 374 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 SOX17Q9H6I2 414 aaPredicted RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 TCF7L2Q9NQB0 619 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 UTP6Q9NYH9 597 aaKnown RBP8.53□□□□□ -1.04
SNX13-201ENST00000409076 ACTL7BQ9Y614 415 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 NHSL1Q5SYE7 1610 aa8.53□□□□□ -1.04
SNX13-201ENST00000409076 CASTOR2A6NHX0 329 aa8.52□□□□□ -1.04
SNX13-201ENST00000409076 ZNF839A8K0R7 811 aa8.52□□□□□ -1.04
SNX13-201ENST00000409076 C9IYK1 514 aa8.52□□□□□ -1.04
SNX13-201ENST00000409076 GJA9P57773 515 aa8.52□□□□□ -1.04
SNX13-201ENST00000409076 MAP7Q14244 749 aa8.52□□□□□ -1.04
SNX13-201ENST00000409076 DNAL1Q4LDG9 190 aa8.52□□□□□ -1.04
SNX13-201ENST00000409076 AGKQ53H12 422 aa8.52□□□□□ -1.04
SNX13-201ENST00000409076 MTX3Q5HYI7 312 aa8.52□□□□□ -1.04
SNX13-201ENST00000409076 CDCA2Q69YH5 1023 aaPredicted RBP8.52□□□□□ -1.04
SNX13-201ENST00000409076 PDZD8Q8NEN9 1154 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms