RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 FOXO6A8MYZ6 492 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 FGF10O15520 208 aaPredicted RBP19.49■□□□□ 0.71
USP39-202ENST00000409025 CPP00450 1065 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 CREB1P16220 341 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 GARSP41250 739 aaKnown RBP19.49■□□□□ 0.71
USP39-202ENST00000409025 COG7P83436 770 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 USP41Q3LFD5 358 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 ZNF534Q76KX8 674 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 AGGF1Q8N302 714 aaeCLIP19.49■□□□□ 0.71
USP39-202ENST00000409025 CFAP36Q96G28 342 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 CWH43Q9H720 699 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 TLR8Q9NR97 1041 aaKnown RBP19.49■□□□□ 0.71
USP39-202ENST00000409025 OLA1Q9NTK5 396 aaKnown RBP19.49■□□□□ 0.71
USP39-202ENST00000409025 CLIC5Q9NZA1 410 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 CDY1Q9Y6F8 540 aa19.49■□□□□ 0.71
USP39-202ENST00000409025 KCNK1O00180 336 aa19.48■□□□□ 0.71
USP39-202ENST00000409025 VNN2O95498 520 aa19.48■□□□□ 0.71
USP39-202ENST00000409025 GSTA2P09210 222 aa19.48■□□□□ 0.71
USP39-202ENST00000409025 CLTBP09497 229 aa19.48■□□□□ 0.71
USP39-202ENST00000409025 MLNP12872 115 aa19.48■□□□□ 0.71
USP39-202ENST00000409025 KRT15P19012 456 aa19.48■□□□□ 0.71
USP39-202ENST00000409025 PTPN3P26045 913 aa19.48■□□□□ 0.71
USP39-202ENST00000409025 HOXC13P31276 330 aa19.48■□□□□ 0.71
USP39-202ENST00000409025 STX2P32856 288 aa19.48■□□□□ 0.71
USP39-202ENST00000409025 MSH2P43246 934 aa19.48■□□□□ 0.71
USP39-202ENST00000409025 DUSP4Q13115 394 aa19.48■□□□□ 0.71
USP39-202ENST00000409025 EFTUD2Q15029 972 aaKnown RBP eCLIP19.48■□□□□ 0.713e-8■■□□□ 13.7
USP39-202ENST00000409025 TRABD2AQ86V40 505 aa19.48■□□□□ 0.71
USP39-202ENST00000409025 FBXO22Q8NEZ5 403 aa19.48■□□□□ 0.71
USP39-202ENST00000409025 ATXN2LQ8WWM7 1075 aaKnown RBP19.48■□□□□ 0.71
USP39-202ENST00000409025 ZNF333Q96JL9 665 aa19.48■□□□□ 0.71
USP39-202ENST00000409025 PAFAH2Q99487 392 aa19.48■□□□□ 0.71
USP39-202ENST00000409025 CRISPLD1Q9H336 500 aa19.48■□□□□ 0.71
USP39-202ENST00000409025 SENP1Q9P0U3 644 aa19.48■□□□□ 0.71
USP39-202ENST00000409025 TCRBV9S1A1TA0A576 114 aa19.47■□□□□ 0.71
USP39-202ENST00000409025 F5H423 210 aaPredicted RBP19.47■□□□□ 0.71
USP39-202ENST00000409025 MOCS2O96007 188 aaPredicted RBP19.47■□□□□ 0.71
USP39-202ENST00000409025 PSMB4P28070 264 aa19.47■□□□□ 0.71
USP39-202ENST00000409025 HNRNPH2P55795 449 aaKnown RBP19.47■□□□□ 0.71
USP39-202ENST00000409025 TBX4P57082 545 aa19.47■□□□□ 0.71
USP39-202ENST00000409025 TAF10Q12962 218 aa19.47■□□□□ 0.71
USP39-202ENST00000409025 MANEALQ5VSG8 457 aa19.47■□□□□ 0.71
USP39-202ENST00000409025 ADGRD1Q6QNK2 874 aa19.47■□□□□ 0.71
USP39-202ENST00000409025 PDCD7Q8N8D1 485 aaKnown RBP19.47■□□□□ 0.71
USP39-202ENST00000409025 SLC39A13Q96H72 371 aa19.47■□□□□ 0.71
USP39-202ENST00000409025 CCT8L2Q96SF2 557 aa19.47■□□□□ 0.71
USP39-202ENST00000409025 DHRS4Q9BTZ2 278 aa19.47■□□□□ 0.71
USP39-202ENST00000409025 MTRRQ9UBK8 725 aa19.47■□□□□ 0.71
USP39-202ENST00000409025 NEU3Q9UQ49 428 aa19.47■□□□□ 0.71
USP39-202ENST00000409025 EFEMP2O95967 443 aa19.47■□□□□ 0.71
USP39-202ENST00000409025 FAM107AO95990 144 aa19.47■□□□□ 0.71
USP39-202ENST00000409025 NRG1Q02297 640 aaPredicted RBP19.47■□□□□ 0.71
USP39-202ENST00000409025 EFEMP1Q12805 493 aa19.47■□□□□ 0.71
USP39-202ENST00000409025 PSMD5Q16401 504 aa19.47■□□□□ 0.71
USP39-202ENST00000409025 PKN2Q16513 984 aaKnown RBP19.47■□□□□ 0.71
USP39-202ENST00000409025 LZTR1Q8N653 840 aa19.47■□□□□ 0.71
USP39-202ENST00000409025 IGSF21Q96ID5 467 aa19.47■□□□□ 0.71
USP39-202ENST00000409025 CELF6Q96J87 481 aaKnown RBP19.47■□□□□ 0.71
USP39-202ENST00000409025 SIGLEC10Q96LC7 697 aa19.47■□□□□ 0.71
USP39-202ENST00000409025 C1orf74Q96LT6 269 aa19.47■□□□□ 0.71
USP39-202ENST00000409025 VAT1Q99536 393 aa19.47■□□□□ 0.71
USP39-202ENST00000409025 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.47■□□□□ 0.71
USP39-202ENST00000409025 TRHDEQ9UKU6 1024 aa19.47■□□□□ 0.71
USP39-202ENST00000409025 HS3ST4Q9Y661 456 aa19.47■□□□□ 0.71
USP39-202ENST00000409025 MAD1L1Q9Y6D9 718 aa19.47■□□□□ 0.71
USP39-202ENST00000409025 TRDMT1O14717 391 aaKnown RBP19.46■□□□□ 0.71
USP39-202ENST00000409025 APOEP02649 317 aa19.46■□□□□ 0.71
USP39-202ENST00000409025 ZNF33AQ06730 810 aa19.46■□□□□ 0.71
USP39-202ENST00000409025 SPOUT1Q5T280 376 aaKnown RBP19.46■□□□□ 0.71
USP39-202ENST00000409025 SLC8B1Q6J4K2 584 aa19.46■□□□□ 0.71
USP39-202ENST00000409025 LRRC8BQ6P9F7 803 aa19.46■□□□□ 0.71
USP39-202ENST00000409025 FOXR1Q6PIV2 292 aa19.46■□□□□ 0.71
USP39-202ENST00000409025 DEPDC1BQ8WUY9 529 aa19.46■□□□□ 0.71
USP39-202ENST00000409025 EBNA1BP2Q99848 306 aaKnown RBP19.46■□□□□ 0.71
USP39-202ENST00000409025 TRABDQ9H4I3 376 aa19.46■□□□□ 0.71
USP39-202ENST00000409025 NKIRAS1Q9NYS0 192 aa19.46■□□□□ 0.71
USP39-202ENST00000409025 BACE2Q9Y5Z0 518 aa19.46■□□□□ 0.71
USP39-202ENST00000409025 IKBKGQ9Y6K9 419 aa19.46■□□□□ 0.71
USP39-202ENST00000409025 ABHD14A-ACY1A0A1B0GW23 586 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 E9PAM4 449 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 GRIA1P42261 906 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 CCT5P48643 541 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 TUBP50607 506 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 MLLT6P55198 1093 aaPredicted RBP19.45■□□□□ 0.7
USP39-202ENST00000409025 ITPRIPL1Q6GPH6 555 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 KIAA1841Q6NSI8 718 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 ANKRD42Q8N9B4 389 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 ZNF473Q8WTR7 871 aaKnown RBP19.45■□□□□ 0.7
USP39-202ENST00000409025 DYDC1Q8WWB3 177 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 PRMT1Q99873 361 aaKnown RBP19.45■□□□□ 0.7
USP39-202ENST00000409025 GREB1Q4ZG55 1949 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 WDR27A2RRH5 827 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 SLC38A8A6NNN8 435 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 TRIP4Q15650 581 aaPredicted RBP19.45■□□□□ 0.7
USP39-202ENST00000409025 KBTBD12Q3ZCT8 623 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 TEX44Q53QW1 395 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 C10orf120Q5SQS8 335 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 RASIP1Q5U651 963 aa19.45■□□□□ 0.7
USP39-202ENST00000409025 RNF168Q8IYW5 571 aaPredicted RBP19.45■□□□□ 0.7
USP39-202ENST00000409025 ATP6V0D2Q8N8Y2 350 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms