RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 UBE2Q2LH0YL09 131 aa7□□□□□ -1.29
PTPN12-202ENST00000407343 HNRNPRO43390 633 aaKnown RBP7□□□□□ -1.29
PTPN12-202ENST00000407343 NUDT3O95989 172 aa7□□□□□ -1.29
PTPN12-202ENST00000407343 LYL1P12980 280 aa7□□□□□ -1.29
PTPN12-202ENST00000407343 CNTFP26441 200 aa7□□□□□ -1.29
PTPN12-202ENST00000407343 TMEM119Q4V9L6 283 aa7□□□□□ -1.29
PTPN12-202ENST00000407343 ANKRD45Q5TZF3 282 aa7□□□□□ -1.29
PTPN12-202ENST00000407343 SYNE3Q6ZMZ3 975 aa7□□□□□ -1.29
PTPN12-202ENST00000407343 LINS1Q8NG48 757 aa7□□□□□ -1.29
PTPN12-202ENST00000407343 GADD45GIP1Q8TAE8 222 aaPredicted RBP7□□□□□ -1.29
PTPN12-202ENST00000407343 SENP7Q9BQF6 1050 aa7□□□□□ -1.29
PTPN12-202ENST00000407343 HTATIP2Q9BUP3 242 aa7□□□□□ -1.29
PTPN12-202ENST00000407343 PDE11AQ9HCR9 933 aa7□□□□□ -1.29
PTPN12-202ENST00000407343 PI4KBQ9UBF8 816 aa7□□□□□ -1.29
PTPN12-202ENST00000407343 HEMK1Q9Y5R4 338 aaPredicted RBP7□□□□□ -1.29
PTPN12-202ENST00000407343 NPIPB13A6NJU9 1138 aa6.99□□□□□ -1.29
PTPN12-202ENST00000407343 NPIPB5A8MRT5 1133 aa6.99□□□□□ -1.29
PTPN12-202ENST00000407343 NPIPB4C9JG80 1138 aa6.99□□□□□ -1.29
PTPN12-202ENST00000407343 AGR2O95994 175 aa6.99□□□□□ -1.29
PTPN12-202ENST00000407343 PRPH2P23942 346 aa6.99□□□□□ -1.29
PTPN12-202ENST00000407343 CDK18Q07002 472 aa6.99□□□□□ -1.29
PTPN12-202ENST00000407343 STRIP1Q5VSL9 837 aa6.99□□□□□ -1.29
PTPN12-202ENST00000407343 TMEM88Q6PEY1 159 aa6.99□□□□□ -1.29
PTPN12-202ENST00000407343 MDGA2Q7Z553 956 aa6.99□□□□□ -1.29
PTPN12-202ENST00000407343 ADGRG3Q86Y34 549 aa6.99□□□□□ -1.29
PTPN12-202ENST00000407343 SRFBP1Q8NEF9 429 aaKnown RBP6.99□□□□□ -1.29
PTPN12-202ENST00000407343 HASPINQ8TF76 798 aa6.99□□□□□ -1.29
PTPN12-202ENST00000407343 TBATAQ96M53 351 aa6.99□□□□□ -1.29
PTPN12-202ENST00000407343 ZNF347Q96SE7 839 aa6.99□□□□□ -1.29
PTPN12-202ENST00000407343 TXNRD2Q9NNW7 524 aa6.99□□□□□ -1.29
PTPN12-202ENST00000407343 BAG5Q9UL15 447 aa6.99□□□□□ -1.29
PTPN12-202ENST00000407343 VWA3AA6NCI4 1184 aa6.98□□□□□ -1.29
PTPN12-202ENST00000407343 MANSC4A6NHS7 340 aaPredicted RBP6.98□□□□□ -1.29
PTPN12-202ENST00000407343 TMEM232C9JQI7 657 aa6.98□□□□□ -1.29
PTPN12-202ENST00000407343 NPHP1O15259 732 aa6.98□□□□□ -1.29
PTPN12-202ENST00000407343 ALDOCP09972 364 aaKnown RBP6.98□□□□□ -1.29
PTPN12-202ENST00000407343 AVPR2P30518 371 aa6.98□□□□□ -1.29
PTPN12-202ENST00000407343 PNPLA4P41247 253 aa6.98□□□□□ -1.29
PTPN12-202ENST00000407343 CHRNDQ07001 517 aa6.98□□□□□ -1.29
PTPN12-202ENST00000407343 SEMA3AQ14563 771 aa6.98□□□□□ -1.29
PTPN12-202ENST00000407343 CTXN3Q4LDR2 81 aa6.98□□□□□ -1.29
PTPN12-202ENST00000407343 ALFQ53S48 1182 aa6.98□□□□□ -1.29
PTPN12-202ENST00000407343 RD3Q7Z3Z2 195 aa6.98□□□□□ -1.29
PTPN12-202ENST00000407343 RHPN2Q8IUC4 686 aa6.98□□□□□ -1.29
PTPN12-202ENST00000407343 FSIP1Q8NA03 581 aa6.98□□□□□ -1.29
PTPN12-202ENST00000407343 NTN5Q8WTR8 489 aaPredicted RBP6.98□□□□□ -1.29
PTPN12-202ENST00000407343 MAELQ96JY0 434 aaKnown RBP6.98□□□□□ -1.29
PTPN12-202ENST00000407343 FCRL5Q96RD9 977 aa6.98□□□□□ -1.29
PTPN12-202ENST00000407343 REEP2Q9BRK0 252 aa6.98□□□□□ -1.29
PTPN12-202ENST00000407343 EFHD1Q9BUP0 239 aa6.98□□□□□ -1.29
PTPN12-202ENST00000407343 HDHD5Q9BXW7 423 aa6.98□□□□□ -1.29
PTPN12-202ENST00000407343 SFXN1Q9H9B4 322 aa6.98□□□□□ -1.29
PTPN12-202ENST00000407343 PRDM16Q9HAZ2 1276 aa6.98□□□□□ -1.29
PTPN12-202ENST00000407343 TLR8Q9NR97 1041 aaKnown RBP6.98□□□□□ -1.29
PTPN12-202ENST00000407343 RBMXL2O75526 392 aaKnown RBP6.97□□□□□ -1.29
PTPN12-202ENST00000407343 ENO1P06733 434 aaKnown RBP6.97□□□□□ -1.29
PTPN12-202ENST00000407343 SLC3A2P08195 630 aaKnown RBP6.97□□□□□ -1.29
PTPN12-202ENST00000407343 HOXA7P31268 230 aaPredicted RBP6.97□□□□□ -1.29
PTPN12-202ENST00000407343 HMGA2P52926 109 aa6.97□□□□□ -1.29
PTPN12-202ENST00000407343 YPEL5P62699 121 aa6.97□□□□□ -1.29
PTPN12-202ENST00000407343 UBE3AQ05086 875 aa6.97□□□□□ -1.29
PTPN12-202ENST00000407343 THOC5Q13769 683 aaKnown RBP6.97□□□□□ -1.29
PTPN12-202ENST00000407343 TAF12Q16514 161 aa6.97□□□□□ -1.29
PTPN12-202ENST00000407343 CC2D1BQ5T0F9 858 aaKnown RBP6.97□□□□□ -1.29
PTPN12-202ENST00000407343 ZNF813Q6ZN06 617 aa6.97□□□□□ -1.29
PTPN12-202ENST00000407343 MAP4K1Q92918 833 aa6.97□□□□□ -1.29
PTPN12-202ENST00000407343 CLPBQ9H078 707 aa6.97□□□□□ -1.29
PTPN12-202ENST00000407343 OSBPL5Q9H0X9 879 aaPredicted RBP6.97□□□□□ -1.29
PTPN12-202ENST00000407343 RRP7AQ9Y3A4 280 aaKnown RBP6.97□□□□□ -1.29
PTPN12-202ENST00000407343 SAC3D1A6NKF1 404 aa6.96□□□□□ -1.3
PTPN12-202ENST00000407343 C17orf100A8MU93 164 aa6.96□□□□□ -1.3
PTPN12-202ENST00000407343 SGPL1O95470 568 aa6.96□□□□□ -1.3
PTPN12-202ENST00000407343 PRKCGP05129 697 aa6.96□□□□□ -1.3
PTPN12-202ENST00000407343 ARSAP15289 507 aa6.96□□□□□ -1.3
PTPN12-202ENST00000407343 PCP4P48539 62 aa6.96□□□□□ -1.3
PTPN12-202ENST00000407343 ADPRHP54922 357 aa6.96□□□□□ -1.3
PTPN12-202ENST00000407343 TLE2Q04725 743 aa6.96□□□□□ -1.3
PTPN12-202ENST00000407343 SLC12A1Q13621 1099 aa6.96□□□□□ -1.3
PTPN12-202ENST00000407343 PFKFB3Q16875 520 aaPredicted RBP6.96□□□□□ -1.3
PTPN12-202ENST00000407343 CERKLQ49MI3 558 aaPredicted RBP6.96□□□□□ -1.3
PTPN12-202ENST00000407343 CBWD5Q5RIA9 395 aa6.96□□□□□ -1.3
PTPN12-202ENST00000407343 RBM44Q6ZP01 1051 aaKnown RBP6.96□□□□□ -1.3
PTPN12-202ENST00000407343 OR52N4Q8NGI2 321 aa6.96□□□□□ -1.3
PTPN12-202ENST00000407343 WIPF2Q8TF74 440 aaPredicted RBP6.96□□□□□ -1.3
PTPN12-202ENST00000407343 ZFPM2Q8WW38 1151 aa6.96□□□□□ -1.3
PTPN12-202ENST00000407343 C5orf34Q96MH7 638 aa6.96□□□□□ -1.3
PTPN12-202ENST00000407343 EIF2AK1Q9BQI3 630 aaKnown RBP6.96□□□□□ -1.3
PTPN12-202ENST00000407343 NOD2Q9HC29 1040 aa6.96□□□□□ -1.3
PTPN12-202ENST00000407343 PKP3Q9Y446 797 aa6.96□□□□□ -1.3
PTPN12-202ENST00000407343 SEPT4O43236 478 aa6.95□□□□□ -1.3
PTPN12-202ENST00000407343 HOXC11O43248 304 aaPredicted RBP6.95□□□□□ -1.3
PTPN12-202ENST00000407343 DHX16O60231 1041 aaKnown RBP6.95□□□□□ -1.3
PTPN12-202ENST00000407343 TGM2P21980 687 aa6.95□□□□□ -1.3
PTPN12-202ENST00000407343 POU5F1BQ06416 359 aa6.95□□□□□ -1.3
PTPN12-202ENST00000407343 MEX3CQ5U5Q3 659 aaKnown RBP6.95□□□□□ -1.3
PTPN12-202ENST00000407343 MTFR2Q6P444 385 aa6.95□□□□□ -1.3
PTPN12-202ENST00000407343 SCN4BQ8IWT1 228 aa6.95□□□□□ -1.3
PTPN12-202ENST00000407343 PAQR4Q8N4S7 273 aaPredicted RBP6.95□□□□□ -1.3
PTPN12-202ENST00000407343 ENDOVQ8N8Q3 282 aaKnown RBP6.95□□□□□ -1.3
PTPN12-202ENST00000407343 USP38Q8NB14 1042 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms