RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 AZIN2Q96A70 460 aa10.12□□□□□ -0.79
MSH2-202ENST00000406134 TUBB6Q9BUF5 446 aa10.12□□□□□ -0.79
MSH2-202ENST00000406134 PNPOQ9NVS9 261 aa10.12□□□□□ -0.79
MSH2-202ENST00000406134 CACNG4Q9UBN1 327 aa10.12□□□□□ -0.79
MSH2-202ENST00000406134 HACD1B0YJ81 288 aa10.12□□□□□ -0.79
MSH2-202ENST00000406134 F8W8V4 182 aa10.12□□□□□ -0.79
MSH2-202ENST00000406134 NRP1O14786 923 aa10.12□□□□□ -0.79
MSH2-202ENST00000406134 TOMM70O94826 608 aa10.12□□□□□ -0.79
MSH2-202ENST00000406134 ERVK-10P10266 1014 aa10.12□□□□□ -0.79
MSH2-202ENST00000406134 IDH3AP50213 366 aa10.12□□□□□ -0.79
MSH2-202ENST00000406134 IRX4P78413 519 aa10.12□□□□□ -0.79
MSH2-202ENST00000406134 ADIGQ0VDE8 80 aa10.12□□□□□ -0.79
MSH2-202ENST00000406134 HEATR6Q6AI08 1181 aaKnown RBP10.12□□□□□ -0.79
MSH2-202ENST00000406134 PGM2L1Q6PCE3 622 aa10.12□□□□□ -0.79
MSH2-202ENST00000406134 NET1Q7Z628 596 aaPredicted RBP10.12□□□□□ -0.79
MSH2-202ENST00000406134 SMG8Q8ND04 991 aaKnown RBP10.12□□□□□ -0.79
MSH2-202ENST00000406134 OR6B3Q8NGW1 331 aa10.12□□□□□ -0.79
MSH2-202ENST00000406134 MOCOSQ96EN8 888 aa10.12□□□□□ -0.79
MSH2-202ENST00000406134 MS4A4AQ96JQ5 239 aa10.12□□□□□ -0.79
MSH2-202ENST00000406134 MPHOSPH6Q99547 160 aaKnown RBP10.12□□□□□ -0.79
MSH2-202ENST00000406134 OSMRQ99650 979 aa10.12□□□□□ -0.79
MSH2-202ENST00000406134 MLPHQ9BV36 600 aaPredicted RBP10.12□□□□□ -0.79
MSH2-202ENST00000406134 RCOR3Q9P2K3 495 aaPredicted RBP10.12□□□□□ -0.79
MSH2-202ENST00000406134 SH3BP1Q9Y3L3 701 aa10.12□□□□□ -0.79
MSH2-202ENST00000406134 FRMPD3Q5JV73 1810 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 A8MXQ7 604 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 XPO1O14980 1071 aaKnown RBP10.11□□□□□ -0.79
MSH2-202ENST00000406134 DAB1O75553 588 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 PDHA1P08559 390 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 PGAM1P18669 254 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 YY1P25490 414 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 PGM1P36871 562 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 HARS2P49590 506 aaKnown RBP10.11□□□□□ -0.79
MSH2-202ENST00000406134 NUMBP49757 651 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 SERPINB9P50453 376 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 IRF9Q00978 393 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 KDSRQ06136 332 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 DBN1Q16643 649 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 RALGPS1Q5JS13 557 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 LDLRAD1Q5T700 205 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 ATG16L1Q676U5 607 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 CMC1Q7Z7K0 106 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 PIGZQ86VD9 579 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 MAPK15Q8TD08 544 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 RNF139Q8WU17 664 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 SPDL1Q96EA4 605 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.11□□□□□ -0.79
MSH2-202ENST00000406134 KLK14Q9P0G3 267 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 PPARGC1AQ9UBK2 798 aaKnown RBP10.11□□□□□ -0.79
MSH2-202ENST00000406134 KPNA7A9QM74 516 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 PTGESO14684 152 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 ZBTB14O43829 449 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 SIN3BO75182 1162 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 USP1O94782 785 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 SLC1A6P48664 564 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 PGGT1BP53609 377 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 STX3Q13277 289 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 FBXO47Q5MNV8 452 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 CLEC20AQ6ZU45 233 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 ZNF467Q7Z7K2 595 aaPredicted RBP10.11□□□□□ -0.79
MSH2-202ENST00000406134 PIWIL2Q8TC59 973 aaKnown RBP10.11□□□□□ -0.79
MSH2-202ENST00000406134 ACMSDQ8TDX5 336 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 AGAP2Q99490 1192 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 WWP1Q9H0M0 922 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 IGSF9Q9P2J2 1179 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 DNAJC16Q9Y2G8 782 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.11□□□□□ -0.79
MSH2-202ENST00000406134 DARSP14868 501 aaKnown RBP10.11□□□□□ -0.79
MSH2-202ENST00000406134 KCNE1P15382 129 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 ZFXP17010 805 aaPredicted RBP10.11□□□□□ -0.79
MSH2-202ENST00000406134 SP100P23497 879 aaPredicted RBP10.11□□□□□ -0.79
MSH2-202ENST00000406134 CNTFP26441 200 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 MLH1P40692 756 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 ERFP50548 548 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 PEX6Q13608 980 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 CCNIQ14094 377 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 SULF1Q8IWU6 871 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 SCUBE1Q8IWY4 988 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 KLHDC8BQ8IXV7 354 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 ZMIZ2Q8NF64 920 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 PRDM12Q9H4Q4 367 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 COPG2Q9UBF2 871 aa10.11□□□□□ -0.79
MSH2-202ENST00000406134 A6NJR5 290 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 MEIS3P2A8K0S8 358 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 HHLA1C9JL84 531 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 GABRDO14764 452 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 ANPEPP15144 967 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 PTPN3P26045 913 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 FDFT1P37268 417 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 SESN2P58004 480 aaPredicted RBP10.1□□□□□ -0.79
MSH2-202ENST00000406134 ZBTB17Q13105 803 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 LBRQ14739 615 aaKnown RBP10.1□□□□□ -0.79
MSH2-202ENST00000406134 DUSP28Q4G0W2 176 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 CAPRIN2Q6IMN6 1127 aaKnown RBP10.1□□□□□ -0.79
MSH2-202ENST00000406134 RAPH1Q70E73 1250 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 TMEM135Q86UB9 458 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 PHTF2Q8N3S3 785 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 SLC25A41Q8N5S1 370 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 GSTCDQ8NEC7 633 aa10.1□□□□□ -0.79
MSH2-202ENST00000406134 NPLOC4Q8TAT6 608 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms