RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 S100A1P23297 94 aa7.56□□□□□ -1.2
HDAC9-202ENST00000405010 S100A5P33763 92 aa7.56□□□□□ -1.2
HDAC9-202ENST00000405010 ARHGDIAP52565 204 aa7.56□□□□□ -1.2
HDAC9-202ENST00000405010 SLC18A2Q05940 514 aa7.56□□□□□ -1.2
HDAC9-202ENST00000405010 KLF1Q13351 362 aaPredicted RBP7.56□□□□□ -1.2
HDAC9-202ENST00000405010 DPYSQ14117 519 aa7.56□□□□□ -1.2
HDAC9-202ENST00000405010 ARL13BQ3SXY8 428 aa7.56□□□□□ -1.2
HDAC9-202ENST00000405010 METTL21CQ5VZV1 264 aa7.56□□□□□ -1.2
HDAC9-202ENST00000405010 TAF2Q6P1X5 1199 aa7.56□□□□□ -1.2
HDAC9-202ENST00000405010 FRMD7Q6ZUT3 714 aa7.56□□□□□ -1.2
HDAC9-202ENST00000405010 SP8Q8IXZ3 490 aa7.56□□□□□ -1.2
HDAC9-202ENST00000405010 TTC39CQ8N584 583 aa7.56□□□□□ -1.2
HDAC9-202ENST00000405010 PHC3Q8NDX5 983 aa7.56□□□□□ -1.2
HDAC9-202ENST00000405010 RDM1Q8NG50 284 aa7.56□□□□□ -1.2
HDAC9-202ENST00000405010 JOSD2Q8TAC2 188 aa7.56□□□□□ -1.2
HDAC9-202ENST00000405010 MAGED4Q96JG8 741 aa7.56□□□□□ -1.2
HDAC9-202ENST00000405010 NPAS2Q99743 824 aa7.56□□□□□ -1.2
HDAC9-202ENST00000405010 C2orf40Q9H1Z8 148 aa7.56□□□□□ -1.2
HDAC9-202ENST00000405010 DNAJC28Q9NX36 388 aa7.56□□□□□ -1.2
HDAC9-202ENST00000405010 NSMCE4AQ9NXX6 385 aa7.56□□□□□ -1.2
HDAC9-202ENST00000405010 GGA3Q9NZ52 723 aa7.56□□□□□ -1.2
HDAC9-202ENST00000405010 ZNRF3Q9ULT6 936 aa7.56□□□□□ -1.2
HDAC9-202ENST00000405010 OGTO15294 1046 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 ZSCAN9O15535 394 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-202ENST00000405010 LRCH4O75427 683 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 LDLRP01130 860 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 TCF4P15884 667 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 LRPAP1P30533 357 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 TLR1Q15399 786 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 MYLK3Q32MK0 819 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 ZBTB41Q5SVQ8 909 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 SNRNP48Q6IEG0 339 aaKnown RBP7.55□□□□□ -1.2
HDAC9-202ENST00000405010 ABRAXAS1Q6UWZ7 409 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 HERC6Q8IVU3 1022 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 FAM156AQ8NDB6 213 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 MKL1Q969V6 931 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 ERLEC1Q96DZ1 483 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 RNF157Q96PX1 679 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 SEPHS2Q99611 448 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 CPNE1Q99829 537 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 NT5C1AQ9BXI3 368 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 RAD21L1Q9H4I0 556 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 CHST12Q9NRB3 414 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 NENFQ9UMX5 172 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 COQ4Q9Y3A0 265 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 PCDHA11Q9Y5I1 949 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 KANSL1LA0AUZ9 987 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 GOLGA8TH3BQL2 631 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 MAGEB3O15480 346 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 TIPRLO75663 272 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 GFAPP14136 432 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 XRCC1P18887 633 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-202ENST00000405010 NFKBIAP25963 317 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 THOP1P52888 689 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 NRLP54845 237 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 RAB15P59190 212 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 DEFA1P59665 94 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 DEFA3P59666 94 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 C15orf59Q2T9L4 293 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-202ENST00000405010 FUT11Q495W5 492 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 TRMT10BQ6PF06 316 aaKnown RBP7.55□□□□□ -1.2
HDAC9-202ENST00000405010 ZFPM1Q8IX07 1006 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 PGAM4Q8N0Y7 254 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 UBR7Q8N806 425 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.55□□□□□ -1.2
HDAC9-202ENST00000405010 FNDC8Q8TC99 324 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 MAGEE2Q8TD90 523 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-202ENST00000405010 CAPSLQ8WWF8 208 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 HPS1Q92902 700 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 LENG9Q96B70 501 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 TCF12Q99081 682 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 SLC25A23Q9BV35 468 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 DGCR6LQ9BY27 220 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 COQ10BQ9H8M1 238 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 PCDH18Q9HCL0 1135 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 GIMAP4Q9NUV9 329 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 RAP2CQ9Y3L5 183 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 GPC6Q9Y625 555 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-202ENST00000405010 COL5A2P05997 1499 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-202ENST00000405010 A0A088AWK7 358 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 PDLIM1O00151 329 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 UGT1A9O60656 530 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 SLC4A1P02730 911 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 CD48P09326 243 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 CCDC159P0C7I6 412 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 CSH1P0DML2 217 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 CSH2P0DML3 217 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 CDH8P55286 799 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 CDH15P55291 814 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 NOMO1Q15155 1222 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 STILQ15468 1287 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 CYP51A1Q16850 503 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 C6orf10Q5SRN2 563 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 TXNRD3NBQ6F5E7 133 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 KLHL35Q6PF15 583 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 KDELC2Q7Z4H8 507 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 WDR49Q8IV35 697 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 DAW1Q8N136 415 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 OR5B17Q8NGF7 314 aa7.55□□□□□ -1.2
HDAC9-202ENST00000405010 HTR3CQ8WXA8 447 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms