RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 H0Y3Z8 333 aa5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 FYB1O15117 783 aa5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 AKAP8O43823 692 aaKnown RBP5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 CST5P28325 142 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 BIRC3Q13489 604 aa5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 RAPGEF1Q13905 1077 aa5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 FAM187BQ17R55 369 aa5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 GALNTL6Q49A17 601 aa5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 AWAT1Q58HT5 328 aa5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 TTC22Q5TAA0 569 aa5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 DENND2CQ68D51 928 aa5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 CEP85Q6P2H3 762 aa5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 ACSM6Q6P461 480 aa5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 NFRKBQ6P4R8 1299 aa5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 RAB11FIP2Q7L804 512 aa5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 ZNF354CQ86Y25 554 aa5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 LINC01465Q8N7H1 131 aa5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 TRIM63Q969Q1 353 aa5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 DAZAP1Q96EP5 407 aaKnown RBP5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 KAZALD1Q96I82 304 aa5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 TESK2Q96S53 571 aa5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 CINPQ9BW66 212 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 SAGE1Q9NXZ1 904 aa5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 CENPJQ9HC77 1338 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 METP08581 1390 aa5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 ADGRB2O60241 1585 aa5.63□□□□□ -1.51
HMGB3P19-201ENST00000403971 SLC38A8A6NNN8 435 aa5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 FAM155BO75949 473 aa5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 CYP21A2P08686 494 aa5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 NHLRC4P0CG21 123 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 MMP8P22894 467 aa5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 JAK3P52333 1124 aa5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 HOXA4Q00056 320 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 RNASELQ05823 741 aaKnown RBP5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 PPFIA1Q13136 1202 aa5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 RPS6KA2Q15349 733 aa5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 AAK1Q2M2I8 961 aa5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 TRIM72Q6ZMU5 477 aa5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 REXO5Q96IC2 774 aaKnown RBP5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 ELOVL1Q9BW60 279 aa5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 SAYSD1Q9NPB0 183 aa5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 KCNK9Q9NPC2 374 aa5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 ABHD10Q9NUJ1 306 aa5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 TFCP2L1Q9NZI6 479 aa5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 KIF17Q9P2E2 1029 aa5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 KCND3Q9UK17 655 aa5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 FEM1BQ9UK73 627 aa5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 TRPC5Q9UL62 973 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 FZD4Q9ULV1 537 aa5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 C19orf53Q9UNZ5 99 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 LZTS1Q9Y250 596 aa5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 ZBTB1Q9Y2K1 713 aa5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 UBE2J1Q9Y385 318 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 PTPRUQ92729 1446 aa5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 NKTRP30414 1462 aaKnown RBP5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 STRCP1A6NGW2 1772 aa5.62□□□□□ -1.51
HMGB3P19-201ENST00000403971 TCRBV5S1A1TA0A578 114 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 CCDC189A1A4V9 331 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 TARM1B6A8C7 271 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 SMIM22K7EJ46 135 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 CLIC1O00299 241 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 C1QL1O75973 258 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 KRT38O76015 456 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 MT-CO3P00414 261 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 CYP2D6P10635 497 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 ATF7P17544 494 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 WT1P19544 449 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 GPD1P21695 349 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 ADD2P35612 726 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 MYOM1P52179 1685 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 ARL4CP56559 192 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 RPL15P61313 204 aaKnown RBP5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 TMF1P82094 1093 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 CFHR3Q02985 330 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 GAB1Q13480 694 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 MFSD13AQ14CX5 517 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 ITSN1Q15811 1721 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 SERPINA13PQ6UXR4 307 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 FTSJ3Q8IY81 847 aaKnown RBP5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 AFG1LQ8WV93 481 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 PPM1EQ8WY54 764 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 SARAFQ96BY9 339 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 CCDC7Q96M83 1385 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 HS6ST2Q96MM7 605 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 CDCP1Q9H5V8 836 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 RXFP3Q9NSD7 469 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 SEMA4GQ9NTN9 838 aa5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 ARPP21Q9UBL0 812 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P19-201ENST00000403971 XIRP1Q702N8 1843 aaKnown RBP5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 RGPD8O14715 1765 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 LRRC3CA6NJW4 275 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 NKX2-8O15522 239 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 IRAK2O43187 625 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 JTBO76095 146 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 C1RP00736 705 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 SERPINA4P29622 427 aa5.6□□□□□ -1.51
HMGB3P19-201ENST00000403971 HSPA2P54652 639 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms