RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 ALDH1A3P47895 512 aa26.35■■□□□ 1.81
CPNE1-205ENST00000401607 TUBP50607 506 aa26.35■■□□□ 1.81
CPNE1-205ENST00000401607 MS4A13Q5J8X5 152 aa26.35■■□□□ 1.81
CPNE1-205ENST00000401607 AGBL2Q5U5Z8 902 aa26.35■■□□□ 1.81
CPNE1-205ENST00000401607 EPS8L3Q8TE67 593 aaKnown RBP26.35■■□□□ 1.81
CPNE1-205ENST00000401607 DEPDC1BQ8WUY9 529 aa26.35■■□□□ 1.81
CPNE1-205ENST00000401607 CELF6Q96J87 481 aaKnown RBP26.35■■□□□ 1.81
CPNE1-205ENST00000401607 BRD8Q9H0E9 1235 aa26.35■■□□□ 1.81
CPNE1-205ENST00000401607 CATSPERBQ9H7T0 1116 aa26.35■■□□□ 1.81
CPNE1-205ENST00000401607 ADAM21Q9UKJ8 722 aa26.35■■□□□ 1.81
CPNE1-205ENST00000401607 ZNF840PA6NDX5 716 aa26.35■■□□□ 1.81
CPNE1-205ENST00000401607 ABHD2P08910 425 aa26.35■■□□□ 1.81
CPNE1-205ENST00000401607 CTSAP10619 480 aa26.35■■□□□ 1.81
CPNE1-205ENST00000401607 RING1Q06587 406 aa26.35■■□□□ 1.81
CPNE1-205ENST00000401607 SEMA5AQ13591 1074 aa26.35■■□□□ 1.81
CPNE1-205ENST00000401607 TCEAL8Q8IYN2 117 aa26.35■■□□□ 1.81
CPNE1-205ENST00000401607 ATP6V0D2Q8N8Y2 350 aa26.35■■□□□ 1.81
CPNE1-205ENST00000401607 KLHL23Q8NBE8 558 aa26.35■■□□□ 1.81
CPNE1-205ENST00000401607 ZNF512Q96ME7 567 aaPredicted RBP26.35■■□□□ 1.81
CPNE1-205ENST00000401607 TTC25Q96NG3 672 aa26.35■■□□□ 1.81
CPNE1-205ENST00000401607 CEP41Q9BYV8 373 aa26.35■■□□□ 1.81
CPNE1-205ENST00000401607 SEPT10Q9P0V9 454 aa26.35■■□□□ 1.81
CPNE1-205ENST00000401607 DYNC1LI1Q9Y6G9 523 aaKnown RBP26.35■■□□□ 1.81
CPNE1-205ENST00000401607 OPHN1O60890 802 aa26.34■■□□□ 1.81
CPNE1-205ENST00000401607 STK10O94804 968 aaKnown RBP26.34■■□□□ 1.81
CPNE1-205ENST00000401607 HMBSP08397 361 aa26.34■■□□□ 1.81
CPNE1-205ENST00000401607 TWF1Q12792 350 aa26.34■■□□□ 1.81
CPNE1-205ENST00000401607 HERC6Q8IVU3 1022 aa26.34■■□□□ 1.81
CPNE1-205ENST00000401607 ARHGAP12Q8IWW6 846 aa26.34■■□□□ 1.81
CPNE1-205ENST00000401607 PDIK1LQ8N165 341 aa26.34■■□□□ 1.81
CPNE1-205ENST00000401607 ZNF567Q8N184 647 aa26.34■■□□□ 1.81
CPNE1-205ENST00000401607 FAM76AQ8TAV0 307 aa26.34■■□□□ 1.81
CPNE1-205ENST00000401607 SP7Q8TDD2 431 aaPredicted RBP26.34■■□□□ 1.81
CPNE1-205ENST00000401607 EXOC4Q96A65 974 aa26.34■■□□□ 1.81
CPNE1-205ENST00000401607 BTN2A3PQ96KV6 586 aa26.34■■□□□ 1.81
CPNE1-205ENST00000401607 FERMT1Q9BQL6 677 aa26.34■■□□□ 1.81
CPNE1-205ENST00000401607 STK39Q9UEW8 545 aa26.34■■□□□ 1.81
CPNE1-205ENST00000401607 ZMYND8Q9ULU4 1186 aaPredicted RBP26.34■■□□□ 1.81
CPNE1-205ENST00000401607 KCNK1O00180 336 aa26.33■■□□□ 1.81
CPNE1-205ENST00000401607 PRRG1O14668 218 aa26.33■■□□□ 1.81
CPNE1-205ENST00000401607 ZNF189O75820 626 aaPredicted RBP26.33■■□□□ 1.81
CPNE1-205ENST00000401607 APRTP07741 180 aa26.33■■□□□ 1.81
CPNE1-205ENST00000401607 CBLBQ13191 982 aa26.33■■□□□ 1.81
CPNE1-205ENST00000401607 MTM1Q13496 603 aa26.33■■□□□ 1.81
CPNE1-205ENST00000401607 ANKMY2Q8IV38 441 aa26.33■■□□□ 1.81
CPNE1-205ENST00000401607 HERVK_113Q902F9 699 aa26.33■■□□□ 1.81
CPNE1-205ENST00000401607 DPF3Q92784 378 aa26.33■■□□□ 1.81
CPNE1-205ENST00000401607 TRMT2BQ96GJ1 504 aaKnown RBP26.33■■□□□ 1.81
CPNE1-205ENST00000401607 SERPINB12Q96P63 405 aa26.33■■□□□ 1.81
CPNE1-205ENST00000401607 CDK5RAP1Q96SZ6 601 aaKnown RBP26.33■■□□□ 1.81
CPNE1-205ENST00000401607 PRDM10Q9NQV6 1147 aa26.33■■□□□ 1.81
CPNE1-205ENST00000401607 NDFIP2Q9NV92 336 aa26.33■■□□□ 1.81
CPNE1-205ENST00000401607 MPP6Q9NZW5 540 aa26.33■■□□□ 1.81
CPNE1-205ENST00000401607 VANGL2Q9ULK5 521 aa26.33■■□□□ 1.81
CPNE1-205ENST00000401607 INSL5Q9Y5Q6 135 aa26.33■■□□□ 1.81
CPNE1-205ENST00000401607 PLXNA4Q9HCM2 1894 aa26.33■■□□□ 1.81
CPNE1-205ENST00000401607 SYN1P17600 705 aa26.33■■□□□ 1.8
CPNE1-205ENST00000401607 TPSB2P20231 275 aa26.33■■□□□ 1.8
CPNE1-205ENST00000401607 PTPN3P26045 913 aa26.33■■□□□ 1.8
CPNE1-205ENST00000401607 ELF1P32519 619 aa26.33■■□□□ 1.8
CPNE1-205ENST00000401607 CREMQ03060 361 aa26.33■■□□□ 1.8
CPNE1-205ENST00000401607 GABPB1Q06547 395 aaPredicted RBP26.33■■□□□ 1.8
CPNE1-205ENST00000401607 PLD1Q13393 1074 aa26.33■■□□□ 1.8
CPNE1-205ENST00000401607 AUHQ13825 339 aaKnown RBP26.33■■□□□ 1.8
CPNE1-205ENST00000401607 TPSAB1Q15661 275 aa26.33■■□□□ 1.8
CPNE1-205ENST00000401607 PPP1R21Q6ZMI0 780 aa26.33■■□□□ 1.8
CPNE1-205ENST00000401607 RTL3Q8N8U3 475 aaKnown RBP26.33■■□□□ 1.8
CPNE1-205ENST00000401607 PKNOX2Q96KN3 472 aa26.33■■□□□ 1.8
CPNE1-205ENST00000401607 ROPN1BQ9BZX4 212 aaPredicted RBP26.33■■□□□ 1.8
CPNE1-205ENST00000401607 ROPN1Q9HAT0 212 aaPredicted RBP26.33■■□□□ 1.8
CPNE1-205ENST00000401607 SLC12A6Q9UHW9 1150 aa26.33■■□□□ 1.8
CPNE1-205ENST00000401607 DNMT3LQ9UJW3 386 aa26.33■■□□□ 1.8
CPNE1-205ENST00000401607 HBS1LQ9Y450 684 aaKnown RBP26.33■■□□□ 1.8
CPNE1-205ENST00000401607 CLUHO75153 1309 aa26.32■■□□□ 1.8
CPNE1-205ENST00000401607 TLDC2A0PJX2 215 aa26.32■■□□□ 1.8
CPNE1-205ENST00000401607 LCHNA4D1U4 455 aa26.32■■□□□ 1.8
CPNE1-205ENST00000401607 SMIM23A6NLE4 172 aa26.32■■□□□ 1.8
CPNE1-205ENST00000401607 WASH4PA8MWX3 477 aa26.32■■□□□ 1.8
CPNE1-205ENST00000401607 CNPP09543 421 aaKnown RBP26.32■■□□□ 1.8
CPNE1-205ENST00000401607 ATP5C1P36542 298 aaKnown RBP26.32■■□□□ 1.8
CPNE1-205ENST00000401607 FDFT1P37268 417 aa26.32■■□□□ 1.8
CPNE1-205ENST00000401607 IRAK1P51617 712 aa26.32■■□□□ 1.8
CPNE1-205ENST00000401607 VEPH1Q14D04 833 aa26.32■■□□□ 1.8
CPNE1-205ENST00000401607 LONRF1Q17RB8 773 aa26.32■■□□□ 1.8
CPNE1-205ENST00000401607 BBS9Q3SYG4 887 aa26.32■■□□□ 1.8
CPNE1-205ENST00000401607 CROCCP2Q86T23 111 aa26.32■■□□□ 1.8
CPNE1-205ENST00000401607 NLRP14Q86W24 1093 aa26.32■■□□□ 1.8
CPNE1-205ENST00000401607 LZTR1Q8N653 840 aa26.32■■□□□ 1.8
CPNE1-205ENST00000401607 MCUQ8NE86 351 aa26.32■■□□□ 1.8
CPNE1-205ENST00000401607 PGM2Q96G03 612 aa26.32■■□□□ 1.8
CPNE1-205ENST00000401607 RAD9AQ99638 391 aa26.32■■□□□ 1.8
CPNE1-205ENST00000401607 BCCIPQ9P287 314 aaKnown RBP eCLIP26.32■■□□□ 1.85e-7■■■□□ 17.8
CPNE1-205ENST00000401607 MAFFQ9ULX9 164 aa26.32■■□□□ 1.8
CPNE1-205ENST00000401607 RASGRF2O14827 1237 aa26.31■■□□□ 1.8
CPNE1-205ENST00000401607 SLCO1A2P46721 670 aa26.31■■□□□ 1.8
CPNE1-205ENST00000401607 KPNA1P52294 538 aaPredicted RBP26.31■■□□□ 1.8
CPNE1-205ENST00000401607 HECTD3Q5T447 861 aa26.31■■□□□ 1.8
CPNE1-205ENST00000401607 AFMIDQ63HM1 303 aa26.31■■□□□ 1.8
CPNE1-205ENST00000401607 ZNF534Q76KX8 674 aa26.31■■□□□ 1.8
CPNE1-205ENST00000401607 CAND1Q86VP6 1230 aaKnown RBP26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms