RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 TYW5A2RUC4 315 aaKnown RBP16.4■□□□□ 0.22
ATG4B-203ENST00000400772 CDX4O14627 284 aaPredicted RBP16.4■□□□□ 0.22
ATG4B-203ENST00000400772 SLC2A3P11169 496 aa16.4■□□□□ 0.22
ATG4B-203ENST00000400772 CD6P30203 668 aa16.4■□□□□ 0.22
ATG4B-203ENST00000400772 CCR1P32246 355 aa16.4■□□□□ 0.22
ATG4B-203ENST00000400772 CSKP41240 450 aa16.4■□□□□ 0.22
ATG4B-203ENST00000400772 MATKP42679 507 aa16.4■□□□□ 0.22
ATG4B-203ENST00000400772 TPMTP51580 245 aa16.4■□□□□ 0.22
ATG4B-203ENST00000400772 POLR2FP61218 127 aaKnown RBP16.4■□□□□ 0.22
ATG4B-203ENST00000400772 C2CD6Q53TS8 623 aa16.4■□□□□ 0.22
ATG4B-203ENST00000400772 TRIM61Q5EBN2 209 aa16.4■□□□□ 0.22
ATG4B-203ENST00000400772 CHSY1Q86X52 802 aa16.4■□□□□ 0.22
ATG4B-203ENST00000400772 XYLT1Q86Y38 959 aa16.4■□□□□ 0.22
ATG4B-203ENST00000400772 OR2T3Q8NH03 318 aa16.4■□□□□ 0.22
ATG4B-203ENST00000400772 SLC20A1Q8WUM9 679 aa16.4■□□□□ 0.22
ATG4B-203ENST00000400772 CPA5Q8WXQ8 436 aa16.4■□□□□ 0.22
ATG4B-203ENST00000400772 PRCCQ92733 491 aaPredicted RBP16.4■□□□□ 0.22
ATG4B-203ENST00000400772 NT5C3BQ969T7 300 aa16.4■□□□□ 0.22
ATG4B-203ENST00000400772 C18orf8Q96DM3 657 aa16.4■□□□□ 0.22
ATG4B-203ENST00000400772 TOE1Q96GM8 510 aaKnown RBP16.4■□□□□ 0.22
ATG4B-203ENST00000400772 MRGPRX3Q96LB0 322 aa16.4■□□□□ 0.22
ATG4B-203ENST00000400772 NPY6RQ99463 290 aa16.4■□□□□ 0.22
ATG4B-203ENST00000400772 PDCL3Q9H2J4 239 aa16.4■□□□□ 0.22
ATG4B-203ENST00000400772 MTG2Q9H4K7 406 aa16.4■□□□□ 0.22
ATG4B-203ENST00000400772 PRSS16Q9NQE7 514 aa16.4■□□□□ 0.22
ATG4B-203ENST00000400772 ANLNQ9NQW6 1124 aa16.4■□□□□ 0.22
ATG4B-203ENST00000400772 SLC12A6Q9UHW9 1150 aa16.4■□□□□ 0.22
ATG4B-203ENST00000400772 C4orf47A7E2U8 309 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 F5H5T6 163 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 I6L893 689 aaPredicted RBP16.39■□□□□ 0.21
ATG4B-203ENST00000400772 M0QYT0 321 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 GFPT2O94808 682 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 LSM8O95777 96 aaKnown RBP16.39■□□□□ 0.21
ATG4B-203ENST00000400772 IGLV3-19P01714 112 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 CHRNB2P17787 502 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 ABCB4P21439 1286 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 SOX5P35711 763 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 CTSOP43234 321 aaPredicted RBP16.39■□□□□ 0.21
ATG4B-203ENST00000400772 RNASE9P60153 205 aaKnown RBP16.39■□□□□ 0.21
ATG4B-203ENST00000400772 NOMO3P69849 1222 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 NME3Q13232 169 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 CDH18Q13634 790 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 PITRM1Q5JRX3 1037 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 FKBP15Q5T1M5 1219 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 IL31Q6EBC2 164 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 FBXL22Q6P050 247 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 SLC23A3Q6PIS1 610 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 ERICH1Q86X53 443 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 CIR1Q86X95 450 aaPredicted RBP16.39■□□□□ 0.21
ATG4B-203ENST00000400772 APCDD1Q8J025 514 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 RNF34Q969K3 372 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 IGSF8Q969P0 613 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 HSPA12BQ96MM6 686 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 NLRC4Q9NPP4 1024 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 PIGVQ9NUD9 493 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.39■□□□□ 0.21
ATG4B-203ENST00000400772 HS3ST4Q9Y661 456 aa16.39■□□□□ 0.21
ATG4B-203ENST00000400772 LGALS16A8MUM7 142 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 H0Y626 953 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 NDUFS2O75306 463 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 ADCY5O95622 1261 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 CYP1A1P04798 512 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-203ENST00000400772 TPM2P07951 284 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 HOXD12P35452 270 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 SCNN1AP37088 669 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 PI4KAP42356 2102 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 DPP6P42658 865 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 CXCR3P49682 368 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 IRAK1P51617 712 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 FMO1Q01740 532 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 TYRO3Q06418 890 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 AUHQ13825 339 aaKnown RBP16.38■□□□□ 0.21
ATG4B-203ENST00000400772 SYCP1Q15431 976 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 PLEKHG6Q3KR16 790 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 PPM1JQ5JR12 505 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 NAA35Q5VZE5 725 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 TRNP1Q6NT89 227 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 C14orf80Q86SX3 495 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 ZNF677Q86XU0 584 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 CACUL1Q86Y37 369 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 PGAP3Q96FM1 320 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-203ENST00000400772 FSCN3Q9NQT6 498 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 ARHGEF38Q9NXL2 777 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 KIAA1522Q9P206 1035 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-203ENST00000400772 SUN2Q9UH99 717 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 TMEM59LQ9UK28 342 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 ERVW-1Q9UQF0 538 aa16.38■□□□□ 0.21
ATG4B-203ENST00000400772 PAGE1O75459 146 aa16.37■□□□□ 0.21
ATG4B-203ENST00000400772 ASLP04424 464 aa16.37■□□□□ 0.21
ATG4B-203ENST00000400772 ATP1A3P13637 1013 aa16.37■□□□□ 0.21
ATG4B-203ENST00000400772 MAOBP27338 520 aa16.37■□□□□ 0.21
ATG4B-203ENST00000400772 OXTRP30559 389 aa16.37■□□□□ 0.21
ATG4B-203ENST00000400772 FLT3P36888 993 aa16.37■□□□□ 0.21
ATG4B-203ENST00000400772 GGCXP38435 758 aa16.37■□□□□ 0.21
ATG4B-203ENST00000400772 RPS14P62263 151 aaKnown RBP16.37■□□□□ 0.21
ATG4B-203ENST00000400772 CDR2Q01850 454 aa16.37■□□□□ 0.21
ATG4B-203ENST00000400772 DUOXA1Q1HG43 343 aa16.37■□□□□ 0.21
ATG4B-203ENST00000400772 C5orf22Q49AR2 442 aa16.37■□□□□ 0.21
ATG4B-203ENST00000400772 FAM102AQ5T9C2 384 aaPredicted RBP16.37■□□□□ 0.21
ATG4B-203ENST00000400772 CXorf57Q6NSI4 855 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms