RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 STARD3Q14849 445 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 CRY2Q49AN0 593 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 ARSHQ5FYA8 562 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 PHACTR4Q8IZ21 702 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 CASP10Q92851 521 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 PTPRHQ9HD43 1115 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 DDX28Q9NUL7 540 aaKnown RBP18.57■□□□□ 0.56
COL18A1-204ENST00000400337 ZMYM2Q9UBW7 1377 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 DAB1O75553 588 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 PARP6Q2NL67 630 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 ZACNQ401N2 412 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 C4orf32Q8N8J7 132 aa18.57■□□□□ 0.56
COL18A1-204ENST00000400337 WDR47O94967 919 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 SLC2A4P14672 509 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 SERPINB3P29508 390 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 TUFMP49411 452 aaKnown RBP18.56■□□□□ 0.56
COL18A1-204ENST00000400337 BLVRAP53004 296 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 MTA1Q13330 715 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 KYQ8NBH2 561 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 MARCH2Q9P0N8 246 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 C6orf203Q9P0P8 240 aaPredicted RBP18.56■□□□□ 0.56
COL18A1-204ENST00000400337 MAGEA13PA6NCF6 341 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 TRUB2O95900 331 aaKnown RBP18.56■□□□□ 0.56
COL18A1-204ENST00000400337 PGK1P00558 417 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 ERVK-10P10266 1014 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 VCLP18206 1134 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 RFX3P48380 749 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 C16orf59Q7L2K0 433 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 TNFRSF25Q93038 417 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 OXNAD1Q96HP4 312 aaPredicted RBP18.56■□□□□ 0.56
COL18A1-204ENST00000400337 NCANO14594 1321 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 TRDMT1O14717 391 aaKnown RBP18.56■□□□□ 0.56
COL18A1-204ENST00000400337 ZNF7P17097 686 aaPredicted RBP18.56■□□□□ 0.56
COL18A1-204ENST00000400337 MMP13P45452 471 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 RUNX1T1Q06455 604 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 BMT2Q1RMZ1 405 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 LRRC38Q5VT99 294 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 COPS7BQ9H9Q2 264 aaPredicted RBP18.56■□□□□ 0.56
COL18A1-204ENST00000400337 CDHR5Q9HBB8 845 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 UBA2Q9UBT2 640 aaPredicted RBP18.56■□□□□ 0.56
COL18A1-204ENST00000400337 KANSL1LA0AUZ9 987 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 LIASO43766 372 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 NPM3O75607 178 aaKnown RBP18.56■□□□□ 0.56
COL18A1-204ENST00000400337 PSMB4P28070 264 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 PIGZQ86VD9 579 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 SNRNP25Q9BV90 132 aaKnown RBP18.56■□□□□ 0.56
COL18A1-204ENST00000400337 STAU1O95793 577 aaKnown RBP18.56■□□□□ 0.56
COL18A1-204ENST00000400337 ZC3H12AQ5D1E8 599 aaKnown RBP18.56■□□□□ 0.56
COL18A1-204ENST00000400337 LRRC8DQ7L1W4 858 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 SPATA20Q8TB22 786 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 FAM84AQ96KN4 292 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 FHDC1Q9C0D6 1143 aaPredicted RBP18.56■□□□□ 0.56
COL18A1-204ENST00000400337 NMRAL1Q9HBL8 299 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 MID1IP1Q9NPA3 183 aa18.56■□□□□ 0.56
COL18A1-204ENST00000400337 SYNCRIPO60506 623 aaKnown RBP18.55■□□□□ 0.56
COL18A1-204ENST00000400337 ZNF682O95780 498 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 ZCCHC18P0CG32 403 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 MSH3P20585 1137 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 ABCG1P45844 678 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 PLK1P53350 603 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 HSFY1Q96LI6 401 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 POLG2Q9UHN1 485 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 VAV3Q9UKW4 847 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 CASZ1Q86V15 1759 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 ASTN2O75129 1339 aaPredicted RBP18.55■□□□□ 0.56
COL18A1-204ENST00000400337 PPP1R11O60927 126 aaPredicted RBP18.55■□□□□ 0.56
COL18A1-204ENST00000400337 ATP6V1B2P21281 511 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 PLD1Q13393 1074 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 EEF1DP3Q658K8 133 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 LRRC39Q96DD0 335 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 PARVBQ9HBI1 364 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 CACNA2D2Q9NY47 1150 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 IPPQ9Y573 584 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 CAMTA1Q9Y6Y1 1673 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 A0A0A0MRY4 1105 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 SKIV2L2P42285 1042 aaKnown RBP18.55■□□□□ 0.56
COL18A1-204ENST00000400337 RPL7AP62424 266 aaKnown RBP18.55■□□□□ 0.56
COL18A1-204ENST00000400337 IRF2BP2Q7Z5L9 587 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 POU5F2Q8N7G0 328 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 SPATA13Q96N96 652 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 ARMCX1Q9P291 453 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 PCYOX1Q9UHG3 505 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 SHBGP04278 402 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 CRADDP78560 199 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 CSTF3Q12996 717 aaKnown RBP18.55■□□□□ 0.56
COL18A1-204ENST00000400337 BOP1Q14137 746 aaKnown RBP18.55■□□□□ 0.56
COL18A1-204ENST00000400337 TRIM60Q495X7 471 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 GPR142Q7Z601 462 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 PRELID2Q8N945 189 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 OR52K1Q8NGK4 314 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 TMEM237Q96Q45 408 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 IKZF4Q9H2S9 585 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 CRYL1Q9Y2S2 319 aa18.55■□□□□ 0.56
COL18A1-204ENST00000400337 PHGDHO43175 533 aaKnown RBP18.54■□□□□ 0.56
COL18A1-204ENST00000400337 PCDH8O95206 1070 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 KRT6AP02538 564 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 KRT6BP04259 564 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 KRT6CP48668 564 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 ZNF135P52742 658 aaPredicted RBP18.54■□□□□ 0.56
COL18A1-204ENST00000400337 NOMO3P69849 1222 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms