RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 AFF1P51825 1210 aaKnown RBP18.19■□□□□ 0.5
HLA-DQB1-204ENST00000399084 MGAT5Q09328 741 aa18.19■□□□□ 0.5
HLA-DQB1-204ENST00000399084 NIPAL4Q0D2K0 466 aa18.19■□□□□ 0.5
HLA-DQB1-204ENST00000399084 MTM1Q13496 603 aa18.19■□□□□ 0.5
HLA-DQB1-204ENST00000399084 SNCBQ16143 134 aa18.19■□□□□ 0.5
HLA-DQB1-204ENST00000399084 INSCQ1MX18 579 aa18.19■□□□□ 0.5
HLA-DQB1-204ENST00000399084 SYCP2LQ5T4T6 812 aa18.19■□□□□ 0.5
HLA-DQB1-204ENST00000399084 CCDC91Q7Z6B0 441 aa18.19■□□□□ 0.5
HLA-DQB1-204ENST00000399084 TSGA13Q96PP4 275 aa18.19■□□□□ 0.5
HLA-DQB1-204ENST00000399084 TMEM237Q96Q45 408 aa18.19■□□□□ 0.5
HLA-DQB1-204ENST00000399084 KLHL8Q9P2G9 620 aaPredicted RBP18.19■□□□□ 0.5
HLA-DQB1-204ENST00000399084 GABRQQ9UN88 632 aa18.19■□□□□ 0.5
HLA-DQB1-204ENST00000399084 NOD1Q9Y239 953 aa18.19■□□□□ 0.5
HLA-DQB1-204ENST00000399084 SYNJ2BP-COX16A0A087WUM0 186 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 FGF10O15520 208 aaPredicted RBP18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 NEFHP12036 1026 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 PTPN3P26045 913 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 SLC8A1P32418 973 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 ELF3P78545 371 aaPredicted RBP18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 EIF4EBP2Q13542 120 aaPredicted RBP18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 PRPSAP1Q14558 356 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 TRIM71Q2Q1W2 868 aaKnown RBP18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 TEX44Q53QW1 395 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 CD300LGQ6UXG3 332 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 GPRIN1Q7Z2K8 1008 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 KLHDC8BQ8IXV7 354 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 C7orf26Q96N11 449 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 FAM111AQ96PZ2 611 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 TKTL2Q9H0I9 626 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 SMYD2Q9NRG4 433 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 RGS18Q9NS28 235 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 ARHGEF38Q9NXL2 777 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 DONSONQ9NYP3 566 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 COX16Q9P0S2 106 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 DCDC2Q9UHG0 476 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 ADAM28Q9UKQ2 775 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 I3L4J1 428 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 MGEA5O60502 916 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 PSMB4P28070 264 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 GARSP41250 739 aaKnown RBP18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 ITGA7Q13683 1181 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 CASC4Q6P4E1 433 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 GLB1LQ6UWU2 654 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 LINC00523Q86TU6 105 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 RNF169Q8NCN4 708 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 ARNTL2Q8WYA1 636 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 SIKE1Q9BRV8 207 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 TSEN34Q9BSV6 310 aaKnown RBP18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 SEZ6LQ9BYH1 1024 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 GBA3Q9H227 469 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 SIRPGQ9P1W8 387 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 MFHAS1Q9Y4C4 1052 aa18.18■□□□□ 0.5
HLA-DQB1-204ENST00000399084 WDR27A2RRH5 827 aa18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 MOXD2PA6NHM9 499 aa18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 TRAFD1O14545 582 aaPredicted RBP18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 DNAJC6O75061 913 aa18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 POMCP01189 267 aa18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 CSH1P0DML2 217 aa18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 CSH2P0DML3 217 aa18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 BDNFP23560 247 aa18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 IGFBP6P24592 240 aaPredicted RBP18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 CCNCP24863 283 aa18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 HOXD10P28358 340 aa18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 NRG1Q02297 640 aaPredicted RBP18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 PPP2R5DQ14738 602 aa18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 CRYMQ14894 314 aa18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 ACBD5Q5T8D3 534 aaPredicted RBP18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 GRTP1Q5TC63 336 aa18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 SPATA2LQ8IUW3 424 aaPredicted RBP18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 DCP1BQ8IZD4 617 aaKnown RBP18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 MPP5Q8N3R9 675 aa18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 SPOCK2Q92563 424 aa18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 FUBP3Q96I24 572 aaKnown RBP eCLIP18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 KLF6Q99612 283 aaPredicted RBP18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 CPNE1Q99829 537 aa18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 CATSPERBQ9H7T0 1116 aa18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 CASS4Q9NQ75 786 aa18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 TMEM30AQ9NV96 361 aa18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 TXNDC16Q9P2K2 825 aa18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 RPL26L1Q9UNX3 145 aaKnown RBP18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 CHKBQ9Y259 395 aa18.17■□□□□ 0.5
HLA-DQB1-204ENST00000399084 FAM72CH0Y354 149 aa18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 PIAS1O75925 651 aa18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 OAZ2O95190 189 aa18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 EPHB2P29323 1055 aa18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 HOXC13P31276 330 aa18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 HADHAP40939 763 aa18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 GRIA1P42261 906 aa18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 CACNA2D1P54289 1103 aa18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 FAM189BP81408 668 aa18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 PRKCZQ05513 592 aa18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 NFE2Q16621 373 aaPredicted RBP18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 FAM72AQ5TYM5 149 aa18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 KCTD11Q693B1 232 aa18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 FAM72DQ6L9T8 149 aa18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 TRMT10BQ6PF06 316 aaKnown RBP18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 SLC24A5Q71RS6 500 aa18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 NLRP9Q7RTR0 991 aa18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 TMEM135Q86UB9 458 aa18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 FAM72BQ86X60 149 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms