RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 USP30Q70CQ3 517 aa12.5□□□□□ -0.41
TFF3-202ENST00000398431 UNC45BQ8IWX7 931 aa12.5□□□□□ -0.41
TFF3-202ENST00000398431 LMO3Q8TAP4 145 aa12.5□□□□□ -0.41
TFF3-202ENST00000398431 IRGQQ8WZA9 623 aa12.5□□□□□ -0.41
TFF3-202ENST00000398431 GOLGA1Q92805 767 aa12.5□□□□□ -0.41
TFF3-202ENST00000398431 SLC39A13Q96H72 371 aa12.5□□□□□ -0.41
TFF3-202ENST00000398431 FCRL2Q96LA5 508 aaPredicted RBP12.5□□□□□ -0.41
TFF3-202ENST00000398431 PRICKLE1Q96MT3 831 aaPredicted RBP12.5□□□□□ -0.41
TFF3-202ENST00000398431 BBC3Q96PG8 261 aaPredicted RBP12.5□□□□□ -0.41
TFF3-202ENST00000398431 FAM129BQ96TA1 746 aa12.5□□□□□ -0.41
TFF3-202ENST00000398431 NEUROG2Q9H2A3 272 aa12.5□□□□□ -0.41
TFF3-202ENST00000398431 PABPC3Q9H361 631 aaKnown RBP12.5□□□□□ -0.41
TFF3-202ENST00000398431 GDPD2Q9HCC8 539 aa12.5□□□□□ -0.41
TFF3-202ENST00000398431 STIM2Q9P246 746 aa12.5□□□□□ -0.41
TFF3-202ENST00000398431 PLXNA2O75051 1894 aa12.5□□□□□ -0.41
TFF3-202ENST00000398431 LAMA5O15230 3695 aa12.5□□□□□ -0.41
TFF3-202ENST00000398431 A0A1B0GTQ1 180 aa12.49□□□□□ -0.41
TFF3-202ENST00000398431 A0A1W2PPC4 97 aa12.49□□□□□ -0.41
TFF3-202ENST00000398431 TRIM49BA6NDI0 452 aa12.49□□□□□ -0.41
TFF3-202ENST00000398431 VILLO15195 856 aa12.49□□□□□ -0.41
TFF3-202ENST00000398431 IRAK2O43187 625 aa12.49□□□□□ -0.41
TFF3-202ENST00000398431 LTFP02788 710 aa12.49□□□□□ -0.41
TFF3-202ENST00000398431 CSKP41240 450 aa12.49□□□□□ -0.41
TFF3-202ENST00000398431 CTSOP43234 321 aaPredicted RBP12.49□□□□□ -0.41
TFF3-202ENST00000398431 GRK6P43250 576 aa12.49□□□□□ -0.41
TFF3-202ENST00000398431 RPL34P49207 117 aaKnown RBP12.49□□□□□ -0.41
TFF3-202ENST00000398431 SLC11A2P49281 568 aa12.49□□□□□ -0.41
TFF3-202ENST00000398431 CCT8P50990 548 aa12.49□□□□□ -0.41
TFF3-202ENST00000398431 TBX4P57082 545 aa12.49□□□□□ -0.41
TFF3-202ENST00000398431 YWHAEP62258 255 aaKnown RBP12.49□□□□□ -0.41
TFF3-202ENST00000398431 RACK1P63244 317 aaKnown RBP12.49□□□□□ -0.41
TFF3-202ENST00000398431 IL9RQ01113 521 aa12.49□□□□□ -0.41
TFF3-202ENST00000398431 ARID5BQ14865 1188 aa12.49□□□□□ -0.41
TFF3-202ENST00000398431 HNRNPA1L2Q32P51 320 aaKnown RBP12.49□□□□□ -0.41
TFF3-202ENST00000398431 NUGGCQ68CJ6 796 aa12.49□□□□□ -0.41
TFF3-202ENST00000398431 TMEM270Q6UE05 265 aa12.49□□□□□ -0.41
TFF3-202ENST00000398431 MMS22LQ6ZRQ5 1243 aa12.49□□□□□ -0.41
TFF3-202ENST00000398431 FMR1NBQ8N0W7 255 aaPredicted RBP12.49□□□□□ -0.41
TFF3-202ENST00000398431 GALNT15Q8N3T1 639 aa12.49□□□□□ -0.41
TFF3-202ENST00000398431 SPATA20Q8TB22 786 aa12.49□□□□□ -0.41
TFF3-202ENST00000398431 ERCC4Q92889 916 aaPredicted RBP12.49□□□□□ -0.41
TFF3-202ENST00000398431 HSFY1Q96LI6 401 aa12.49□□□□□ -0.41
TFF3-202ENST00000398431 SCAND2PQ9GZW5 306 aaPredicted RBP12.49□□□□□ -0.41
TFF3-202ENST00000398431 SCUBE2Q9NQ36 999 aa12.49□□□□□ -0.41
TFF3-202ENST00000398431 FBXL12Q9NXK8 326 aa12.49□□□□□ -0.41
TFF3-202ENST00000398431 ARMCX3Q9UH62 379 aaPredicted RBP12.49□□□□□ -0.41
TFF3-202ENST00000398431 XPO7Q9UIA9 1087 aaKnown RBP12.49□□□□□ -0.41
TFF3-202ENST00000398431 SLCO3A1Q9UIG8 710 aa12.49□□□□□ -0.41
TFF3-202ENST00000398431 SCML1Q9UN30 329 aa12.49□□□□□ -0.41
TFF3-202ENST00000398431 IGSF10Q6WRI0 2623 aa12.48□□□□□ -0.41
TFF3-202ENST00000398431 A0A1W2PP55 124 aa12.48□□□□□ -0.41
TFF3-202ENST00000398431 A0A1W2PR77 199 aa12.48□□□□□ -0.41
TFF3-202ENST00000398431 TTC34A8MYJ7 566 aa12.48□□□□□ -0.41
TFF3-202ENST00000398431 PMM2O15305 246 aa12.48□□□□□ -0.41
TFF3-202ENST00000398431 MID1O15344 667 aa12.48□□□□□ -0.41
TFF3-202ENST00000398431 TBXAS1P24557 533 aaPredicted RBP12.48□□□□□ -0.41
TFF3-202ENST00000398431 BRD2P25440 801 aaKnown RBP12.48□□□□□ -0.41
TFF3-202ENST00000398431 FMO5P49326 533 aa12.48□□□□□ -0.41
TFF3-202ENST00000398431 TTC31Q49AM3 519 aaPredicted RBP12.48□□□□□ -0.41
TFF3-202ENST00000398431 MS4A13Q5J8X5 152 aa12.48□□□□□ -0.41
TFF3-202ENST00000398431 NCEH1Q6PIU2 408 aa12.48□□□□□ -0.41
TFF3-202ENST00000398431 DHRS13Q6UX07 377 aa12.48□□□□□ -0.41
TFF3-202ENST00000398431 GATAD2AQ86YP4 633 aa12.48□□□□□ -0.41
TFF3-202ENST00000398431 MFN1Q8IWA4 741 aa12.48□□□□□ -0.41
TFF3-202ENST00000398431 DHX40Q8IX18 779 aaKnown RBP12.48□□□□□ -0.41
TFF3-202ENST00000398431 SCUBE3Q8IX30 993 aa12.48□□□□□ -0.41
TFF3-202ENST00000398431 CFAP52Q8N1V2 620 aa12.48□□□□□ -0.41
TFF3-202ENST00000398431 KDM1BQ8NB78 822 aa12.48□□□□□ -0.41
TFF3-202ENST00000398431 ENGASEQ8NFI3 743 aa12.48□□□□□ -0.41
TFF3-202ENST00000398431 DQX1Q8TE96 717 aaKnown RBP12.48□□□□□ -0.41
TFF3-202ENST00000398431 SLC6A18Q96N87 628 aa12.48□□□□□ -0.41
TFF3-202ENST00000398431 GSDMAQ96QA5 445 aa12.48□□□□□ -0.41
TFF3-202ENST00000398431 NUCKS1Q9H1E3 243 aaKnown RBP12.48□□□□□ -0.41
TFF3-202ENST00000398431 ADAMTS1Q9UHI8 967 aa12.48□□□□□ -0.41
TFF3-202ENST00000398431 ERVW-1Q9UQF0 538 aa12.48□□□□□ -0.41
TFF3-202ENST00000398431 NAALADL1Q9UQQ1 740 aa12.48□□□□□ -0.41
TFF3-202ENST00000398431 NCKAP1Q9Y2A7 1128 aa12.48□□□□□ -0.41
TFF3-202ENST00000398431 PCDHB4Q9Y5E5 795 aa12.48□□□□□ -0.41
TFF3-202ENST00000398431 ARID1BQ8NFD5 2236 aaPredicted RBP12.47□□□□□ -0.41
TFF3-202ENST00000398431 TP53BP1Q12888 1972 aaPredicted RBP12.47□□□□□ -0.41
TFF3-202ENST00000398431 A0A087WV48 116 aa12.47□□□□□ -0.41
TFF3-202ENST00000398431 TARSL2A2RTX5 802 aaKnown RBP12.47□□□□□ -0.41
TFF3-202ENST00000398431 FAM47DPA6NHR8 397 aa12.47□□□□□ -0.41
TFF3-202ENST00000398431 CBX4O00257 560 aa12.47□□□□□ -0.41
TFF3-202ENST00000398431 DFNA5O60443 496 aa12.47□□□□□ -0.41
TFF3-202ENST00000398431 ASLP04424 464 aa12.47□□□□□ -0.41
TFF3-202ENST00000398431 SLC8A1P32418 973 aa12.47□□□□□ -0.41
TFF3-202ENST00000398431 GPD2P43304 727 aa12.47□□□□□ -0.41
TFF3-202ENST00000398431 CST6Q15828 149 aa12.47□□□□□ -0.41
TFF3-202ENST00000398431 DCAF6Q58WW2 860 aa12.47□□□□□ -0.41
TFF3-202ENST00000398431 PITRM1Q5JRX3 1037 aa12.47□□□□□ -0.41
TFF3-202ENST00000398431 SYPL2Q5VXT5 272 aa12.47□□□□□ -0.41
TFF3-202ENST00000398431 MMAAQ8IVH4 418 aaKnown RBP12.47□□□□□ -0.41
TFF3-202ENST00000398431 APCDD1Q8J025 514 aa12.47□□□□□ -0.41
TFF3-202ENST00000398431 CARNMT1Q8N4J0 409 aa12.47□□□□□ -0.41
TFF3-202ENST00000398431 AADATQ8N5Z0 425 aa12.47□□□□□ -0.41
TFF3-202ENST00000398431 PDCD7Q8N8D1 485 aaKnown RBP12.47□□□□□ -0.41
TFF3-202ENST00000398431 HJURPQ8NCD3 748 aaPredicted RBP12.47□□□□□ -0.41
TFF3-202ENST00000398431 GANCQ8TET4 914 aa12.47□□□□□ -0.41
TFF3-202ENST00000398431 PTPRN2Q92932 1015 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms