RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 IRF6O14896 467 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 TBX10O75333 385 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 H2AFYO75367 372 aaKnown RBP5.59□□□□□ -1.52
PTPRD-205ENST00000397611 ARL4AP40617 200 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 ACADSBP45954 432 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 RPL34P49207 117 aaKnown RBP5.59□□□□□ -1.52
PTPRD-205ENST00000397611 EIF3EP60228 445 aaKnown RBP5.59□□□□□ -1.52
PTPRD-205ENST00000397611 MAPRE2Q15555 327 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 CCDC85BQ15834 202 aaPredicted RBP5.59□□□□□ -1.52
PTPRD-205ENST00000397611 SLC5A9Q2M3M2 681 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 MROH9Q5TGP6 573 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 BNC2Q6ZN30 1099 aaPredicted RBP5.59□□□□□ -1.52
PTPRD-205ENST00000397611 CCDC81Q6ZN84 652 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 ZBTB46Q86UZ6 589 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 CDR2LQ86X02 465 aaPredicted RBP5.59□□□□□ -1.52
PTPRD-205ENST00000397611 SHCBP1Q8NEM2 672 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 ZC3H15Q8WU90 426 aaKnown RBP5.59□□□□□ -1.52
PTPRD-205ENST00000397611 ATP6V1E2Q96A05 226 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 VPS50Q96JG6 964 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 SUN2Q9UH99 717 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 PCSK2P16519 638 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 YY1P25490 414 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 MIPP30301 263 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 S100A5P33763 92 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 TRAF2Q12933 501 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 MRPL28Q13084 256 aaKnown RBP5.59□□□□□ -1.52
PTPRD-205ENST00000397611 GPR162Q16538 588 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 DPYSL2Q16555 572 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 IRAK1BP1Q5VVH5 260 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 SNRNP48Q6IEG0 339 aaKnown RBP5.59□□□□□ -1.52
PTPRD-205ENST00000397611 ZNF555Q8NEP9 628 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 USP29Q9HBJ7 922 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 BFARQ9NZS9 450 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 GINS2Q9Y248 185 aa5.59□□□□□ -1.52
PTPRD-205ENST00000397611 MAGEB16A2A368 324 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 ASNA1O43681 348 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 WDR47O94967 919 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 CRABP2P29373 138 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 ACSBG2Q5FVE4 666 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 ZNF484Q5JVG2 852 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 DPY19L2Q6NUT2 758 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 IFNEQ86WN2 208 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 GLIS1Q8NBF1 620 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 PDCD6IPQ8WUM4 868 aaKnown RBP5.58□□□□□ -1.52
PTPRD-205ENST00000397611 TOPORSQ9NS56 1045 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-205ENST00000397611 SEPT9Q9UHD8 586 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-205ENST00000397611 E9PBE3 544 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 ATP9BO43861 1147 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 KLHL41O60662 606 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 GP5P40197 560 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 BMPR2Q13873 1038 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 BEND5Q7L4P6 421 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 CLEC4FQ8N1N0 589 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 CRYBG2Q8N1P7 616 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 TOP1MTQ969P6 601 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 MED10Q9BTT4 135 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 PLGRKTQ9HBL7 147 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 C8orf4Q9NR00 106 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 SELENONQ9NZV5 590 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 CNOT11Q9UKZ1 510 aaKnown RBP5.58□□□□□ -1.52
PTPRD-205ENST00000397611 BARX2Q9UMQ3 279 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-205ENST00000397611 CDYLQ9Y232 598 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 KIF13BQ9NQT8 1826 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 KPNA4O00629 521 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-205ENST00000397611 WBP4O75554 376 aaKnown RBP5.58□□□□□ -1.52
PTPRD-205ENST00000397611 ABL2P42684 1182 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 PHKA2P46019 1235 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 HCAR3P49019 387 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 OSTNP61366 133 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 PDPK2PQ6A1A2 396 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 DHDDSQ86SQ9 333 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 APOBEC3FQ8IUX4 373 aaKnown RBP5.58□□□□□ -1.52
PTPRD-205ENST00000397611 PLD5Q8N7P1 536 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 GLMNQ92990 594 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 POP5Q969H6 163 aaKnown RBP5.58□□□□□ -1.52
PTPRD-205ENST00000397611 CNDP1Q96KN2 507 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 SLC7A8Q9UHI5 535 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 CAPN14A8MX76 684 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 PRKCBP05771 671 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 PDGFRAP16234 1089 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 GPD1P21695 349 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 RPA3P35244 121 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-205ENST00000397611 RPL5P46777 297 aaKnown RBP5.58□□□□□ -1.52
PTPRD-205ENST00000397611 DEFA1P59665 94 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 DEFA3P59666 94 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 TFAMQ00059 246 aaKnown RBP5.58□□□□□ -1.52
PTPRD-205ENST00000397611 NR1D2Q14995 579 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 RIOX2Q8IUF8 465 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 DDIASQ8IXT1 998 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 COLGALT2Q8IYK4 626 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 GIPC3Q8TF64 312 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 CENPIQ92674 756 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-205ENST00000397611 PPP1R14BQ96C90 147 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 MCEEQ96PE7 176 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 COPS7BQ9H9Q2 264 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-205ENST00000397611 FNIP2Q9P278 1114 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 KIF17Q9P2E2 1029 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 TMCO1Q9UM00 188 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 ANGPTL3Q9Y5C1 460 aa5.58□□□□□ -1.52
PTPRD-205ENST00000397611 TIMM44O43615 452 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms