RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 BHMTQ93088 406 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 WDR24Q96S15 920 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 TLR10Q9BXR5 811 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 CALN1Q9BXU9 219 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 ECT2Q9H8V3 914 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 CWC15Q9P013 229 aaKnown RBP24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 STIM2Q9P246 746 aa24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 PPARGC1AQ9UBK2 798 aaKnown RBP24.35■■□□□ 1.49
TSPAN4-203ENST00000397397 MYOFQ9NZM1 2061 aa24.34■■□□□ 1.49
TSPAN4-203ENST00000397397 IGLV3-10A0A075B6K4 115 aa24.34■■□□□ 1.49
TSPAN4-203ENST00000397397 DRGXA6NNA5 263 aa24.34■■□□□ 1.49
TSPAN4-203ENST00000397397 DAPK3O43293 454 aa24.34■■□□□ 1.49
TSPAN4-203ENST00000397397 ADH1CP00326 375 aa24.34■■□□□ 1.49
TSPAN4-203ENST00000397397 HTR7P34969 479 aa24.34■■□□□ 1.49
TSPAN4-203ENST00000397397 MMRN1Q13201 1228 aa24.34■■□□□ 1.49
TSPAN4-203ENST00000397397 RUNX3Q13761 415 aa24.34■■□□□ 1.49
TSPAN4-203ENST00000397397 C5orf22Q49AR2 442 aa24.34■■□□□ 1.49
TSPAN4-203ENST00000397397 ARTNQ5T4W7 220 aa24.34■■□□□ 1.49
TSPAN4-203ENST00000397397 CIR1Q86X95 450 aaPredicted RBP24.34■■□□□ 1.49
TSPAN4-203ENST00000397397 CPA6Q8N4T0 437 aa24.34■■□□□ 1.49
TSPAN4-203ENST00000397397 RBM41Q96IZ5 413 aaKnown RBP24.34■■□□□ 1.49
TSPAN4-203ENST00000397397 BBS2Q9BXC9 721 aa24.34■■□□□ 1.49
TSPAN4-203ENST00000397397 MPP6Q9NZW5 540 aa24.34■■□□□ 1.49
TSPAN4-203ENST00000397397 ADH5P11766 374 aa24.33■■□□□ 1.49
TSPAN4-203ENST00000397397 EPHB2P29323 1055 aa24.33■■□□□ 1.49
TSPAN4-203ENST00000397397 IRAK1P51617 712 aa24.33■■□□□ 1.49
TSPAN4-203ENST00000397397 NR1H3Q13133 447 aa24.33■■□□□ 1.49
TSPAN4-203ENST00000397397 TDGQ13569 410 aa24.33■■□□□ 1.49
TSPAN4-203ENST00000397397 TTC39BQ5VTQ0 682 aaPredicted RBP24.33■■□□□ 1.49
TSPAN4-203ENST00000397397 MFSD7Q6UXD7 560 aa24.33■■□□□ 1.49
TSPAN4-203ENST00000397397 RFX8Q6ZV50 586 aa24.33■■□□□ 1.49
TSPAN4-203ENST00000397397 NYAP1Q6ZVC0 841 aa24.33■■□□□ 1.49
TSPAN4-203ENST00000397397 CCDC50Q8IVM0 306 aa24.33■■□□□ 1.49
TSPAN4-203ENST00000397397 TTC8Q8TAM2 541 aa24.33■■□□□ 1.49
TSPAN4-203ENST00000397397 TSC1Q92574 1164 aa24.33■■□□□ 1.49
TSPAN4-203ENST00000397397 C16orf45Q96MC5 204 aaPredicted RBP24.33■■□□□ 1.49
TSPAN4-203ENST00000397397 CSPG4P5Q96PW8 444 aa24.33■■□□□ 1.49
TSPAN4-203ENST00000397397 ZYG11BQ9C0D3 744 aa24.33■■□□□ 1.49
TSPAN4-203ENST00000397397 PLK2Q9NYY3 685 aa24.33■■□□□ 1.49
TSPAN4-203ENST00000397397 MARK1Q9P0L2 795 aa24.33■■□□□ 1.49
TSPAN4-203ENST00000397397 RCOR3Q9P2K3 495 aaPredicted RBP24.33■■□□□ 1.49
TSPAN4-203ENST00000397397 NEU3Q9UQ49 428 aa24.33■■□□□ 1.49
TSPAN4-203ENST00000397397 DOCK4Q8N1I0 1966 aa24.32■■□□□ 1.48
TSPAN4-203ENST00000397397 C3orf70A6NLC5 250 aaPredicted RBP24.32■■□□□ 1.48
TSPAN4-203ENST00000397397 NEDD8-MDP1E9PL57 170 aa24.32■■□□□ 1.48
TSPAN4-203ENST00000397397 ARNTLO00327 626 aa24.32■■□□□ 1.48
TSPAN4-203ENST00000397397 CNTN5O94779 1100 aa24.32■■□□□ 1.48
TSPAN4-203ENST00000397397 ATP1A1P05023 1023 aaKnown RBP24.32■■□□□ 1.48
TSPAN4-203ENST00000397397 HCAR3P49019 387 aa24.32■■□□□ 1.48
TSPAN4-203ENST00000397397 ETF1P62495 437 aaKnown RBP24.32■■□□□ 1.48
TSPAN4-203ENST00000397397 GAD2Q05329 585 aa24.32■■□□□ 1.48
TSPAN4-203ENST00000397397 ALFQ53S48 1182 aa24.32■■□□□ 1.48
TSPAN4-203ENST00000397397 FYB2Q5VWT5 728 aa24.32■■□□□ 1.48
TSPAN4-203ENST00000397397 GJD3Q8N144 294 aa24.32■■□□□ 1.48
TSPAN4-203ENST00000397397 CSGALNACT1Q8TDX6 532 aa24.32■■□□□ 1.48
TSPAN4-203ENST00000397397 P2RY11Q96G91 374 aa24.32■■□□□ 1.48
TSPAN4-203ENST00000397397 ZNF670Q9BS34 389 aa24.32■■□□□ 1.48
TSPAN4-203ENST00000397397 GTSE1Q9NYZ3 720 aa24.32■■□□□ 1.48
TSPAN4-203ENST00000397397 CUL9Q8IWT3 2517 aa24.32■■□□□ 1.48
TSPAN4-203ENST00000397397 TICRRQ7Z2Z1 1910 aa24.32■■□□□ 1.48
TSPAN4-203ENST00000397397 KCNK3O14649 394 aa24.31■■□□□ 1.48
TSPAN4-203ENST00000397397 TYRP14679 529 aa24.31■■□□□ 1.48
TSPAN4-203ENST00000397397 IL4RP24394 825 aa24.31■■□□□ 1.48
TSPAN4-203ENST00000397397 HOXC13P31276 330 aa24.31■■□□□ 1.48
TSPAN4-203ENST00000397397 ZNF211Q13398 564 aaPredicted RBP24.31■■□□□ 1.48
TSPAN4-203ENST00000397397 ITPRIPL2Q3MIP1 535 aa24.31■■□□□ 1.48
TSPAN4-203ENST00000397397 ANKRD20A8PQ5CZ79 823 aa24.31■■□□□ 1.48
TSPAN4-203ENST00000397397 SPOCD1Q6ZMY3 1216 aa24.31■■□□□ 1.48
TSPAN4-203ENST00000397397 PSMB7Q99436 277 aa24.31■■□□□ 1.48
TSPAN4-203ENST00000397397 CATSPERBQ9H7T0 1116 aa24.31■■□□□ 1.48
TSPAN4-203ENST00000397397 DNAI1Q9UI46 699 aa24.31■■□□□ 1.48
TSPAN4-203ENST00000397397 OTOL1A6NHN0 477 aaPredicted RBP24.3■■□□□ 1.48
TSPAN4-203ENST00000397397 FGF10O15520 208 aaPredicted RBP24.3■■□□□ 1.48
TSPAN4-203ENST00000397397 NARSO43776 548 aaKnown RBP24.3■■□□□ 1.48
TSPAN4-203ENST00000397397 PENKP01210 267 aaPredicted RBP24.3■■□□□ 1.48
TSPAN4-203ENST00000397397 PYGMP11217 842 aa24.3■■□□□ 1.48
TSPAN4-203ENST00000397397 RHOQP17081 205 aa24.3■■□□□ 1.48
TSPAN4-203ENST00000397397 AMPD1P23109 780 aa24.3■■□□□ 1.48
TSPAN4-203ENST00000397397 HOXD9P28356 352 aaPredicted RBP24.3■■□□□ 1.48
TSPAN4-203ENST00000397397 CETN2P41208 172 aa24.3■■□□□ 1.48
TSPAN4-203ENST00000397397 CDH4P55283 916 aa24.3■■□□□ 1.48
TSPAN4-203ENST00000397397 DPYSQ14117 519 aa24.3■■□□□ 1.48
TSPAN4-203ENST00000397397 MPP7Q5T2T1 576 aa24.3■■□□□ 1.48
TSPAN4-203ENST00000397397 DCAF12L1Q5VU92 463 aa24.3■■□□□ 1.48
TSPAN4-203ENST00000397397 SYT10Q6XYQ8 523 aa24.3■■□□□ 1.48
TSPAN4-203ENST00000397397 CHST9Q7L1S5 443 aa24.3■■□□□ 1.48
TSPAN4-203ENST00000397397 VSIG1Q86XK7 387 aa24.3■■□□□ 1.48
TSPAN4-203ENST00000397397 CARNMT1Q8N4J0 409 aa24.3■■□□□ 1.48
TSPAN4-203ENST00000397397 NAPGQ99747 312 aaPredicted RBP24.3■■□□□ 1.48
TSPAN4-203ENST00000397397 MAK16Q9BXY0 300 aaKnown RBP24.3■■□□□ 1.48
TSPAN4-203ENST00000397397 A0A1B0GVM2 712 aa24.29■■□□□ 1.48
TSPAN4-203ENST00000397397 CTAGE9A4FU28 777 aa24.29■■□□□ 1.48
TSPAN4-203ENST00000397397 TCAF2A6NFQ2 919 aa24.29■■□□□ 1.48
TSPAN4-203ENST00000397397 ZNF487B1APH4 448 aa24.29■■□□□ 1.48
TSPAN4-203ENST00000397397 HOXC11O43248 304 aaPredicted RBP24.29■■□□□ 1.48
TSPAN4-203ENST00000397397 CLDN11O75508 207 aa24.29■■□□□ 1.48
TSPAN4-203ENST00000397397 SRFP11831 508 aa24.29■■□□□ 1.48
TSPAN4-203ENST00000397397 CDKN2BP42772 138 aa24.29■■□□□ 1.48
TSPAN4-203ENST00000397397 COPS2P61201 443 aa24.29■■□□□ 1.48
TSPAN4-203ENST00000397397 LLGL1Q15334 1064 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms