RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 MPP7Q5T2T1 576 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 ADGRF1Q5T601 910 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 C9orf64Q5T6V5 341 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 SND1Q7KZF4 910 aaKnown RBP eCLIP8.78□□□□□ -1
SCFD1-202ENST00000396629 BHLHA9Q7RTU4 235 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 IQCHQ86VS3 1027 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 SLC9A9Q8IVB4 645 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 KDM1BQ8NB78 822 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 GOLGA5Q8TBA6 731 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 KCNE4Q8WWG9 221 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 MRGPRX3Q96LB0 322 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 APOBEC3GQ9HC16 384 aaKnown RBP8.78□□□□□ -1
SCFD1-202ENST00000396629 TARSL2A2RTX5 802 aaKnown RBP8.77□□□□□ -1.01
SCFD1-202ENST00000396629 VPS37CA5D8V6 355 aaPredicted RBP8.77□□□□□ -1.01
SCFD1-202ENST00000396629 TRIM38O00635 465 aa8.77□□□□□ -1.01
SCFD1-202ENST00000396629 IKBKBO14920 756 aa8.77□□□□□ -1.01
SCFD1-202ENST00000396629 SIGLEC6O43699 453 aa8.77□□□□□ -1.01
SCFD1-202ENST00000396629 RNASEH2AO75792 299 aaKnown RBP8.77□□□□□ -1.01
SCFD1-202ENST00000396629 ASLP04424 464 aa8.77□□□□□ -1.01
SCFD1-202ENST00000396629 GOT1P17174 413 aa8.77□□□□□ -1.01
SCFD1-202ENST00000396629 SLC8A1P32418 973 aa8.77□□□□□ -1.01
SCFD1-202ENST00000396629 ST8SIA6P61647 398 aa8.77□□□□□ -1.01
SCFD1-202ENST00000396629 GABREP78334 506 aa8.77□□□□□ -1.01
SCFD1-202ENST00000396629 CEBPZQ03701 1054 aaKnown RBP8.77□□□□□ -1.01
SCFD1-202ENST00000396629 C1orf220Q5T0J3 134 aa8.77□□□□□ -1.01
SCFD1-202ENST00000396629 NAPEPLDQ6IQ20 393 aa8.77□□□□□ -1.01
SCFD1-202ENST00000396629 FAM173BQ6P4H8 233 aa8.77□□□□□ -1.01
SCFD1-202ENST00000396629 IGF2-ASQ6U949 168 aa8.77□□□□□ -1.01
SCFD1-202ENST00000396629 AADATQ8N5Z0 425 aa8.77□□□□□ -1.01
SCFD1-202ENST00000396629 ZNF557Q8N988 423 aaPredicted RBP8.77□□□□□ -1.01
SCFD1-202ENST00000396629 FAM129BQ96TA1 746 aa8.77□□□□□ -1.01
SCFD1-202ENST00000396629 OMDQ99983 421 aa8.77□□□□□ -1.01
SCFD1-202ENST00000396629 SLC39A2Q9NP94 309 aa8.77□□□□□ -1.01
SCFD1-202ENST00000396629 ASCL3Q9NQ33 180 aa8.77□□□□□ -1.01
SCFD1-202ENST00000396629 TDRD6O60522 2096 aaKnown RBP8.77□□□□□ -1.01
SCFD1-202ENST00000396629 KLK10O43240 276 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 MAGEC1O60732 1142 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 ZBED1O96006 694 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 MPOP05164 745 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 PIK3CAP42336 1068 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 ADPRHP54922 357 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 OVGP1Q12889 678 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 PIK3R6Q5UE93 754 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 PIGZQ86VD9 579 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 MMAAQ8IVH4 418 aaKnown RBP8.76□□□□□ -1.01
SCFD1-202ENST00000396629 SLC25A45Q8N413 288 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 FIBINQ8TAL6 211 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 FAM131CQ96AQ9 280 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 DEPDC7Q96QD5 511 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 USP28Q96RU2 1077 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 DNAI2Q9GZS0 605 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 POLR1BQ9H9Y6 1135 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 ARHGAP20Q9P2F6 1191 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 INTS6Q9UL03 887 aaKnown RBP8.76□□□□□ -1.01
SCFD1-202ENST00000396629 ITIH6Q6UXX5 1313 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 K7ENP7 123 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 LZTS3O60299 673 aaPredicted RBP8.76□□□□□ -1.01
SCFD1-202ENST00000396629 OPA1O60313 960 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 TBL1XO60907 577 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 C5AR1P21730 350 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 NUDT1P36639 197 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 CSKP41240 450 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 TKTL1P51854 596 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 PPP2CBP62714 309 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 PPP2CAP67775 309 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 SKOR1P84550 965 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 ARHGAP17Q68EM7 881 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 INO80CQ6PI98 192 aaPredicted RBP8.76□□□□□ -1.01
SCFD1-202ENST00000396629 PRPF39Q86UA1 669 aaKnown RBP8.76□□□□□ -1.01
SCFD1-202ENST00000396629 OR4C6Q8NH72 309 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 OR14C36Q8NHC7 312 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 NDRG1Q92597 394 aaKnown RBP8.76□□□□□ -1.01
SCFD1-202ENST00000396629 DHX58Q96C10 678 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 VCPIP1Q96JH7 1222 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 ULBP1Q9BZM6 244 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 KDM4CQ9H3R0 1056 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 IL17BQ9UHF5 180 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 SFMBT1Q9UHJ3 866 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 DMTF1Q9Y222 760 aa8.76□□□□□ -1.01
SCFD1-202ENST00000396629 EDDM13A0A1B0GTR0 161 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 PVALEFA0A1B0GWK0 134 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 IRAK2O43187 625 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 USP12O75317 370 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 ADH1BP00325 375 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 IGLV3-27P01718 113 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 SRPRAP08240 638 aaKnown RBP8.75□□□□□ -1.01
SCFD1-202ENST00000396629 CKMT1AP12532 417 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 CD58P19256 250 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 DAB2P98082 770 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 RFWD3Q6PCD5 774 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 IQUBQ8NA54 791 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 ANKRD52Q8NB46 1076 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 AZIN2Q96A70 460 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 HEXIM2Q96MH2 286 aaKnown RBP8.75□□□□□ -1.01
SCFD1-202ENST00000396629 NIF3L1Q9GZT8 377 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 MAGEF1Q9HAY2 307 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 THSD1Q9NS62 852 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 CYTH4Q9UIA0 394 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 ERVW-1Q9UQF0 538 aa8.75□□□□□ -1.01
SCFD1-202ENST00000396629 SPTA1P02549 2419 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms