RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 TCP11X2Q5H9J9 407 aa18.94■□□□□ 0.62
FXN-203ENST00000396366 PITRM1Q5JRX3 1037 aa18.94■□□□□ 0.62
FXN-203ENST00000396366 EFHC1Q5JVL4 640 aa18.94■□□□□ 0.62
FXN-203ENST00000396366 WDR45BQ5MNZ6 344 aa18.94■□□□□ 0.62
FXN-203ENST00000396366 SYCP2LQ5T4T6 812 aa18.94■□□□□ 0.62
FXN-203ENST00000396366 KLHDC7AQ5VTJ3 777 aa18.94■□□□□ 0.62
FXN-203ENST00000396366 DCAF12L1Q5VU92 463 aa18.94■□□□□ 0.62
FXN-203ENST00000396366 OLFML1Q6UWY5 402 aa18.94■□□□□ 0.62
FXN-203ENST00000396366 C11orf57Q6ZUT1 292 aaPredicted RBP18.94■□□□□ 0.62
FXN-203ENST00000396366 CHSY1Q86X52 802 aa18.94■□□□□ 0.62
FXN-203ENST00000396366 APCDD1Q8J025 514 aa18.94■□□□□ 0.62
FXN-203ENST00000396366 GPT2Q8TD30 523 aa18.94■□□□□ 0.62
FXN-203ENST00000396366 BTN2A3PQ96KV6 586 aa18.94■□□□□ 0.62
FXN-203ENST00000396366 PRMT1Q99873 361 aaKnown RBP18.94■□□□□ 0.62
FXN-203ENST00000396366 NUP58Q9BVL2 599 aa18.94■□□□□ 0.62
FXN-203ENST00000396366 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.94■□□□□ 0.621e-6■■■■□ 25.4
FXN-203ENST00000396366 DDIT4Q9NX09 232 aa18.94■□□□□ 0.62
FXN-203ENST00000396366 TAB2Q9NYJ8 693 aa18.94■□□□□ 0.62
FXN-203ENST00000396366 TYW5A2RUC4 315 aaKnown RBP18.93■□□□□ 0.62
FXN-203ENST00000396366 METTL12A8MUP2 240 aa18.93■□□□□ 0.62
FXN-203ENST00000396366 H0Y626 953 aa18.93■□□□□ 0.62
FXN-203ENST00000396366 CSRP1P21291 193 aaKnown RBP18.93■□□□□ 0.62
FXN-203ENST00000396366 ZCCHC9Q8N567 271 aaKnown RBP18.93■□□□□ 0.62
FXN-203ENST00000396366 MINDY1Q8N5J2 469 aa18.93■□□□□ 0.62
FXN-203ENST00000396366 CADM4Q8NFZ8 388 aa18.93■□□□□ 0.62
FXN-203ENST00000396366 DNASE2BQ8WZ79 361 aa18.93■□□□□ 0.62
FXN-203ENST00000396366 NAA15Q9BXJ9 866 aaKnown RBP18.93■□□□□ 0.62
FXN-203ENST00000396366 ADAM33Q9BZ11 813 aa18.93■□□□□ 0.62
FXN-203ENST00000396366 MIR1-1HGQ9H1L0 117 aa18.93■□□□□ 0.62
FXN-203ENST00000396366 C6orf106Q9H6K1 298 aaPredicted RBP18.93■□□□□ 0.62
FXN-203ENST00000396366 ASNSD1Q9NWL6 643 aa18.93■□□□□ 0.62
FXN-203ENST00000396366 SLCO3A1Q9UIG8 710 aa18.93■□□□□ 0.62
FXN-203ENST00000396366 NFE2L3Q9Y4A8 694 aa18.93■□□□□ 0.62
FXN-203ENST00000396366 SLCO1B1Q9Y6L6 691 aa18.93■□□□□ 0.62
FXN-203ENST00000396366 EPG5Q9HCE0 2579 aa18.92■□□□□ 0.62
FXN-203ENST00000396366 TTC34A8MYJ7 566 aa18.92■□□□□ 0.62
FXN-203ENST00000396366 HSF2BPO75031 334 aa18.92■□□□□ 0.62
FXN-203ENST00000396366 GLI1P08151 1106 aa18.92■□□□□ 0.62
FXN-203ENST00000396366 CYP11B1P15538 503 aa18.92■□□□□ 0.62
FXN-203ENST00000396366 TFE3P19532 575 aaPredicted RBP18.92■□□□□ 0.62
FXN-203ENST00000396366 IRAK1P51617 712 aa18.92■□□□□ 0.62
FXN-203ENST00000396366 ATXN3P54252 364 aaPredicted RBP18.92■□□□□ 0.62
FXN-203ENST00000396366 SLC6A3Q01959 620 aa18.92■□□□□ 0.62
FXN-203ENST00000396366 NME3Q13232 169 aa18.92■□□□□ 0.62
FXN-203ENST00000396366 TAF3Q5VWG9 929 aa18.92■□□□□ 0.62
FXN-203ENST00000396366 RABEPKQ7Z6M1 372 aa18.92■□□□□ 0.62
FXN-203ENST00000396366 DHX40Q8IX18 779 aaKnown RBP18.92■□□□□ 0.62
FXN-203ENST00000396366 ATP6V0D2Q8N8Y2 350 aa18.92■□□□□ 0.62
FXN-203ENST00000396366 RNF34Q969K3 372 aa18.92■□□□□ 0.62
FXN-203ENST00000396366 IGSF8Q969P0 613 aa18.92■□□□□ 0.62
FXN-203ENST00000396366 NOX5Q96PH1 765 aa18.92■□□□□ 0.62
FXN-203ENST00000396366 SYNCQ9H7C4 482 aa18.92■□□□□ 0.62
FXN-203ENST00000396366 SUN2Q9UH99 717 aa18.92■□□□□ 0.62
FXN-203ENST00000396366 EIF2B4Q9UI10 523 aaKnown RBP18.92■□□□□ 0.62
FXN-203ENST00000396366 ERVW-1Q9UQF0 538 aa18.92■□□□□ 0.62
FXN-203ENST00000396366 CEP295Q9C0D2 2601 aa18.92■□□□□ 0.62
FXN-203ENST00000396366 F5H5T6 163 aa18.91■□□□□ 0.62
FXN-203ENST00000396366 SIN3BO75182 1162 aa18.91■□□□□ 0.62
FXN-203ENST00000396366 TOP3BO95985 862 aaKnown RBP18.91■□□□□ 0.62
FXN-203ENST00000396366 C7P10643 843 aa18.91■□□□□ 0.62
FXN-203ENST00000396366 CEACAM1P13688 526 aa18.91■□□□□ 0.62
FXN-203ENST00000396366 GGCXP38435 758 aa18.91■□□□□ 0.62
FXN-203ENST00000396366 KLK7P49862 253 aa18.91■□□□□ 0.62
FXN-203ENST00000396366 RNASE9P60153 205 aaKnown RBP18.91■□□□□ 0.62
FXN-203ENST00000396366 CENPCQ03188 943 aa18.91■□□□□ 0.62
FXN-203ENST00000396366 ZNF252P-AS1Q0IIN9 211 aa18.91■□□□□ 0.62
FXN-203ENST00000396366 SEMA3BQ13214 749 aa18.91■□□□□ 0.62
FXN-203ENST00000396366 C2CD6Q53TS8 623 aa18.91■□□□□ 0.62
FXN-203ENST00000396366 OTUD1Q5VV17 481 aaPredicted RBP18.91■□□□□ 0.62
FXN-203ENST00000396366 C14orf80Q86SX3 495 aa18.91■□□□□ 0.62
FXN-203ENST00000396366 CCDC117Q8IWD4 279 aaPredicted RBP18.91■□□□□ 0.62
FXN-203ENST00000396366 CCAR2Q8N163 923 aaKnown RBP18.91■□□□□ 0.62
FXN-203ENST00000396366 ZNF557Q8N988 423 aaPredicted RBP18.91■□□□□ 0.62
FXN-203ENST00000396366 RPL10LQ96L21 214 aaKnown RBP18.91■□□□□ 0.62
FXN-203ENST00000396366 RSPH9Q9H1X1 276 aaPredicted RBP18.91■□□□□ 0.62
FXN-203ENST00000396366 VPS16Q9H269 839 aa18.91■□□□□ 0.62
FXN-203ENST00000396366 KIAA1522Q9P206 1035 aaPredicted RBP18.91■□□□□ 0.62
FXN-203ENST00000396366 SLC12A6Q9UHW9 1150 aa18.91■□□□□ 0.62
FXN-203ENST00000396366 ANGPTL2Q9UKU9 493 aa18.91■□□□□ 0.62
FXN-203ENST00000396366 FRYQ5TBA9 3013 aa18.9■□□□□ 0.62
FXN-203ENST00000396366 CACNA1EQ15878 2313 aa18.9■□□□□ 0.62
FXN-203ENST00000396366 M0QYT0 321 aa18.9■□□□□ 0.62
FXN-203ENST00000396366 OPHN1O60890 802 aa18.9■□□□□ 0.62
FXN-203ENST00000396366 DAB1O75553 588 aa18.9■□□□□ 0.62
FXN-203ENST00000396366 DNTTP04053 509 aa18.9■□□□□ 0.62
FXN-203ENST00000396366 UCHL3P15374 230 aa18.9■□□□□ 0.62
FXN-203ENST00000396366 GNSP15586 552 aa18.9■□□□□ 0.62
FXN-203ENST00000396366 PDGFRAP16234 1089 aa18.9■□□□□ 0.62
FXN-203ENST00000396366 ABCB4P21439 1286 aa18.9■□□□□ 0.62
FXN-203ENST00000396366 EEF1GP26641 437 aaKnown RBP18.9■□□□□ 0.62
FXN-203ENST00000396366 MZF1P28698 734 aaPredicted RBP18.9■□□□□ 0.62
FXN-203ENST00000396366 CCR1P32246 355 aa18.9■□□□□ 0.62
FXN-203ENST00000396366 STK19P49842 368 aaPredicted RBP18.9■□□□□ 0.62
FXN-203ENST00000396366 BPIFB4P59827 614 aa18.9■□□□□ 0.62
FXN-203ENST00000396366 ST8SIA6P61647 398 aa18.9■□□□□ 0.62
FXN-203ENST00000396366 AUHQ13825 339 aaKnown RBP18.9■□□□□ 0.62
FXN-203ENST00000396366 HNRNPA1L2Q32P51 320 aaKnown RBP18.9■□□□□ 0.62
FXN-203ENST00000396366 C9orf64Q5T6V5 341 aa18.9■□□□□ 0.62
FXN-203ENST00000396366 FBXL22Q6P050 247 aa18.9■□□□□ 0.62
FXN-203ENST00000396366 SLC26A9Q7LBE3 791 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms