RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 MYOFQ9NZM1 2061 aa16.96■□□□□ 0.31
DDR1-229ENST00000396342 PPP1R3GB7ZBB8 358 aa16.95■□□□□ 0.3
DDR1-229ENST00000396342 RNF225M0QZC1 329 aaPredicted RBP16.95■□□□□ 0.3
DDR1-229ENST00000396342 RNASEH2AO75792 299 aaKnown RBP16.95■□□□□ 0.3
DDR1-229ENST00000396342 LUC7L3O95232 432 aaKnown RBP16.95■□□□□ 0.3
DDR1-229ENST00000396342 TOP3BO95985 862 aaKnown RBP16.95■□□□□ 0.3
DDR1-229ENST00000396342 ACSL1P33121 698 aa16.95■□□□□ 0.3
DDR1-229ENST00000396342 KRT9P35527 623 aa16.95■□□□□ 0.3
DDR1-229ENST00000396342 GRK6P43250 576 aa16.95■□□□□ 0.3
DDR1-229ENST00000396342 CCT8P50990 548 aa16.95■□□□□ 0.3
DDR1-229ENST00000396342 ECT2LQ008S8 904 aa16.95■□□□□ 0.3
DDR1-229ENST00000396342 PTK2Q05397 1052 aa16.95■□□□□ 0.3
DDR1-229ENST00000396342 MORC3Q14149 939 aa16.95■□□□□ 0.3
DDR1-229ENST00000396342 HNRNPA1L2Q32P51 320 aaKnown RBP16.95■□□□□ 0.3
DDR1-229ENST00000396342 FAM133BQ5BKY9 247 aaKnown RBP16.95■□□□□ 0.3
DDR1-229ENST00000396342 MS4A13Q5J8X5 152 aa16.95■□□□□ 0.3
DDR1-229ENST00000396342 EFHC1Q5JVL4 640 aa16.95■□□□□ 0.3
DDR1-229ENST00000396342 KIAA0907Q7Z7F0 614 aaPredicted RBP16.95■□□□□ 0.3
DDR1-229ENST00000396342 ARHGEF19Q8IW93 802 aa16.95■□□□□ 0.3
DDR1-229ENST00000396342 ADAMTS14Q8WXS8 1223 aa16.95■□□□□ 0.3
DDR1-229ENST00000396342 KAT5Q92993 513 aa16.95■□□□□ 0.3
DDR1-229ENST00000396342 CAMK1GQ96NX5 476 aa16.95■□□□□ 0.3
DDR1-229ENST00000396342 PABPC3Q9H361 631 aaKnown RBP16.95■□□□□ 0.3
DDR1-229ENST00000396342 C6orf106Q9H6K1 298 aaPredicted RBP16.95■□□□□ 0.3
DDR1-229ENST00000396342 AASDHPPTQ9NRN7 309 aa16.95■□□□□ 0.3
DDR1-229ENST00000396342 NAALADL1Q9UQQ1 740 aa16.95■□□□□ 0.3
DDR1-229ENST00000396342 ANKRD6Q9Y2G4 727 aa16.95■□□□□ 0.3
DDR1-229ENST00000396342 FARP1Q9Y4F1 1045 aaPredicted RBP16.95■□□□□ 0.3
DDR1-229ENST00000396342 PAXBP1Q9Y5B6 917 aa16.95■□□□□ 0.3
DDR1-229ENST00000396342 NUP205Q92621 2012 aa16.94■□□□□ 0.3
DDR1-229ENST00000396342 GJB3O75712 270 aa16.94■□□□□ 0.3
DDR1-229ENST00000396342 ADH1BP00325 375 aa16.94■□□□□ 0.3
DDR1-229ENST00000396342 CD44P16070 742 aaKnown RBP16.94■□□□□ 0.3
DDR1-229ENST00000396342 SLC6A4P31645 630 aa16.94■□□□□ 0.3
DDR1-229ENST00000396342 CCR1P32246 355 aa16.94■□□□□ 0.3
DDR1-229ENST00000396342 GPD2P43304 727 aa16.94■□□□□ 0.3
DDR1-229ENST00000396342 MTIF2P46199 727 aaKnown RBP16.94■□□□□ 0.3
DDR1-229ENST00000396342 MARSP56192 900 aaKnown RBP16.94■□□□□ 0.3
DDR1-229ENST00000396342 RPS24P62847 133 aaKnown RBP16.94■□□□□ 0.3
DDR1-229ENST00000396342 CCDC15Q0P6D6 951 aa16.94■□□□□ 0.3
DDR1-229ENST00000396342 PTPRNQ16849 979 aa16.94■□□□□ 0.3
DDR1-229ENST00000396342 DCAF6Q58WW2 860 aa16.94■□□□□ 0.3
DDR1-229ENST00000396342 PITRM1Q5JRX3 1037 aa16.94■□□□□ 0.3
DDR1-229ENST00000396342 KIAA0895LQ68EN5 471 aa16.94■□□□□ 0.3
DDR1-229ENST00000396342 SND1Q7KZF4 910 aaKnown RBP eCLIP16.94■□□□□ 0.3
DDR1-229ENST00000396342 RAB44Q7Z6P3 723 aaPredicted RBP16.94■□□□□ 0.3
DDR1-229ENST00000396342 FAM114A1Q8IWE2 563 aa16.94■□□□□ 0.3
DDR1-229ENST00000396342 DHX40Q8IX18 779 aaKnown RBP16.94■□□□□ 0.3
DDR1-229ENST00000396342 GALNT15Q8N3T1 639 aa16.94■□□□□ 0.3
DDR1-229ENST00000396342 ADAM32Q8TC27 787 aa16.94■□□□□ 0.3
DDR1-229ENST00000396342 CLEC4CQ8WTT0 213 aa16.94■□□□□ 0.3
DDR1-229ENST00000396342 GATA6Q92908 595 aa16.94■□□□□ 0.3
DDR1-229ENST00000396342 IGSF8Q969P0 613 aa16.94■□□□□ 0.3
DDR1-229ENST00000396342 P2RY11Q96G91 374 aa16.94■□□□□ 0.3
DDR1-229ENST00000396342 FCRL2Q96LA5 508 aaPredicted RBP16.94■□□□□ 0.3
DDR1-229ENST00000396342 RSPH9Q9H1X1 276 aaPredicted RBP16.94■□□□□ 0.3
DDR1-229ENST00000396342 TM9SF3Q9HD45 589 aa16.94■□□□□ 0.3
DDR1-229ENST00000396342 TMEM51Q9NW97 253 aa16.94■□□□□ 0.3
DDR1-229ENST00000396342 PCOLCE2Q9UKZ9 415 aa16.94■□□□□ 0.3
DDR1-229ENST00000396342 WASF3Q9UPY6 502 aa16.94■□□□□ 0.3
DDR1-229ENST00000396342 ERVW-1Q9UQF0 538 aa16.94■□□□□ 0.3
DDR1-229ENST00000396342 TRUB2O95900 331 aaKnown RBP16.93■□□□□ 0.3
DDR1-229ENST00000396342 GLI1P08151 1106 aa16.93■□□□□ 0.3
DDR1-229ENST00000396342 PRKCSHP14314 528 aaPredicted RBP16.93■□□□□ 0.3
DDR1-229ENST00000396342 ZNF18P17022 549 aa16.93■□□□□ 0.3
DDR1-229ENST00000396342 TACR2P21452 398 aa16.93■□□□□ 0.3
DDR1-229ENST00000396342 RACK1P63244 317 aaKnown RBP16.93■□□□□ 0.3
DDR1-229ENST00000396342 CST6Q15828 149 aa16.93■□□□□ 0.3
DDR1-229ENST00000396342 ARHGAP44Q17R89 818 aa16.93■□□□□ 0.3
DDR1-229ENST00000396342 ZC3H12AQ5D1E8 599 aaKnown RBP16.93■□□□□ 0.3
DDR1-229ENST00000396342 FAM46CQ5VWP2 391 aa16.93■□□□□ 0.3
DDR1-229ENST00000396342 RAP1GAP2Q684P5 730 aa16.93■□□□□ 0.3
DDR1-229ENST00000396342 SMYD5Q6GMV2 418 aa16.93■□□□□ 0.3
DDR1-229ENST00000396342 DENND1BQ6P3S1 775 aa16.93■□□□□ 0.3
DDR1-229ENST00000396342 GLRX5Q86SX6 157 aa16.93■□□□□ 0.3
DDR1-229ENST00000396342 TAC4Q86UU9 113 aa16.93■□□□□ 0.3
DDR1-229ENST00000396342 CFAP52Q8N1V2 620 aa16.93■□□□□ 0.3
DDR1-229ENST00000396342 OR2T34Q8NGX1 318 aa16.93■□□□□ 0.3
DDR1-229ENST00000396342 LMO3Q8TAP4 145 aa16.93■□□□□ 0.3
DDR1-229ENST00000396342 ZNF606Q8WXB4 792 aa16.93■□□□□ 0.3
DDR1-229ENST00000396342 BIRC7Q96CA5 298 aa16.93■□□□□ 0.3
DDR1-229ENST00000396342 SLC4A5Q9BY07 1137 aa16.93■□□□□ 0.3
DDR1-229ENST00000396342 NUCKS1Q9H1E3 243 aaKnown RBP16.93■□□□□ 0.3
DDR1-229ENST00000396342 DDIT4Q9NX09 232 aa16.93■□□□□ 0.3
DDR1-229ENST00000396342 RWDD2AQ9UIY3 292 aa16.93■□□□□ 0.3
DDR1-229ENST00000396342 SLC25A13Q9UJS0 675 aa16.93■□□□□ 0.3
DDR1-229ENST00000396342 FZD4Q9ULV1 537 aa16.93■□□□□ 0.3
DDR1-229ENST00000396342 MAP1BP46821 2468 aaKnown RBP16.92■□□□□ 0.3
DDR1-229ENST00000396342 CEP295Q9C0D2 2601 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 GON4LQ3T8J9 2241 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 SYNJ2BP-COX16A0A087WUM0 186 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 GOLGA8CPA6NN73 597 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 KCNU1A8MYU2 1149 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 E5RJQ4 531 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 YKT6O15498 198 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 MAGEC1O60732 1142 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 HSF2BPO75031 334 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 SIN3BO75182 1162 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 IL1BP01584 269 aa16.92■□□□□ 0.3
DDR1-229ENST00000396342 C5AR1P21730 350 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms