RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 PPIDQ08752 370 aaKnown RBP12.48□□□□□ -0.41
ITGB1-202ENST00000396033 ZNF280DQ6N043 979 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 CCDC197Q8NCU1 140 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 MZB1Q8WU39 189 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 CASP10Q92851 521 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 B3GALT6Q96L58 329 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 ELAC2Q9BQ52 826 aaKnown RBP12.48□□□□□ -0.41
ITGB1-202ENST00000396033 TRIM56Q9BRZ2 755 aaKnown RBP12.48□□□□□ -0.41
ITGB1-202ENST00000396033 NMUR1Q9HB89 426 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 FGFR1OP2Q9NVK5 253 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 ARHGEF38Q9NXL2 777 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 NUDT5Q9UKK9 219 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 PCDHB5Q9Y5E4 795 aa12.48□□□□□ -0.41
ITGB1-202ENST00000396033 RASSF9O75901 435 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 GSTA2P09210 222 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 PTPN3P26045 913 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 CYP2C18P33260 490 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 ZKSCAN8Q15776 578 aaPredicted RBP12.47□□□□□ -0.41
ITGB1-202ENST00000396033 BRMS1LQ5PSV4 323 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 RNF187Q5TA31 235 aaPredicted RBP12.47□□□□□ -0.41
ITGB1-202ENST00000396033 NUGGCQ68CJ6 796 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 CASC4Q6P4E1 433 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 KIRREL3Q8IZU9 778 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 OSBPL2Q9H1P3 480 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 PLAC1Q9HBJ0 212 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 IGSF9Q9P2J2 1179 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 HCSTQ9UBK5 93 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 MYO18AQ92614 2054 aaKnown RBP12.47□□□□□ -0.41
ITGB1-202ENST00000396033 TYROBPO43914 113 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 FSBPO95073 299 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 CCR1P32246 355 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 SLC18A1P54219 525 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 ARPP19P56211 112 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 GALNT2Q10471 571 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 SPARCL1Q14515 664 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 SLC26A11Q86WA9 606 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 NUP93Q8N1F7 819 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 GSDMBQ8TAX9 411 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 HDAC11Q96DB2 347 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 CELF6Q96J87 481 aaKnown RBP12.47□□□□□ -0.41
ITGB1-202ENST00000396033 KLF6Q99612 283 aaPredicted RBP12.47□□□□□ -0.41
ITGB1-202ENST00000396033 BRD8Q9H0E9 1235 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 PIH1D1Q9NWS0 290 aaKnown RBP12.47□□□□□ -0.41
ITGB1-202ENST00000396033 GOLGA8RI6L899 631 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 PITPNM1O00562 1244 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 TRDMT1O14717 391 aaKnown RBP12.47□□□□□ -0.41
ITGB1-202ENST00000396033 ASMTLO95671 621 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 MT-ND3P03897 115 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 MLNP12872 115 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 GARSP41250 739 aaKnown RBP12.47□□□□□ -0.41
ITGB1-202ENST00000396033 SESN2P58004 480 aaPredicted RBP12.47□□□□□ -0.41
ITGB1-202ENST00000396033 FAAP100Q0VG06 881 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 LRRC8BQ6P9F7 803 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 LRRC6Q86X45 466 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 ANKS4BQ8N8V4 417 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 DENND1AQ8TEH3 1009 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 STAMBPL1Q96FJ0 436 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 C8orf48Q96LL4 319 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 GPR62Q9BZJ7 368 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 SSU72Q9NP77 194 aaKnown RBP12.47□□□□□ -0.41
ITGB1-202ENST00000396033 PCDHA11Q9Y5I1 949 aa12.47□□□□□ -0.41
ITGB1-202ENST00000396033 GOLGA6L7A0A1B0GV03 622 aa12.46□□□□□ -0.41
ITGB1-202ENST00000396033 PRKCHP24723 683 aa12.46□□□□□ -0.41
ITGB1-202ENST00000396033 SLC11A1P49279 550 aa12.46□□□□□ -0.41
ITGB1-202ENST00000396033 EIF4EBP2Q13542 120 aaPredicted RBP12.46□□□□□ -0.41
ITGB1-202ENST00000396033 C6orf89Q6UWU4 347 aa12.46□□□□□ -0.41
ITGB1-202ENST00000396033 PIGWQ7Z7B1 504 aa12.46□□□□□ -0.41
ITGB1-202ENST00000396033 OTUD6BQ8N6M0 293 aa12.46□□□□□ -0.41
ITGB1-202ENST00000396033 ATAD1Q8NBU5 361 aa12.46□□□□□ -0.41
ITGB1-202ENST00000396033 APBB2Q92870 758 aa12.46□□□□□ -0.41
ITGB1-202ENST00000396033 DEFB118Q96PH6 123 aa12.46□□□□□ -0.41
ITGB1-202ENST00000396033 MARCH5Q9NX47 278 aa12.46□□□□□ -0.41
ITGB1-202ENST00000396033 SCML2Q9UQR0 700 aa12.46□□□□□ -0.41
ITGB1-202ENST00000396033 VWA8A3KMH1 1905 aa12.46□□□□□ -0.41
ITGB1-202ENST00000396033 WDR27A2RRH5 827 aa12.46□□□□□ -0.41
ITGB1-202ENST00000396033 CXorf49A8MYA2 514 aaPredicted RBP12.46□□□□□ -0.41
ITGB1-202ENST00000396033 PAGE1O75459 146 aa12.46□□□□□ -0.41
ITGB1-202ENST00000396033 MOCS2O96007 188 aaPredicted RBP12.46□□□□□ -0.41
ITGB1-202ENST00000396033 C1QAP02745 245 aa12.46□□□□□ -0.41
ITGB1-202ENST00000396033 ALDH2P05091 517 aa12.46□□□□□ -0.41
ITGB1-202ENST00000396033 CPB1P15086 417 aa12.46□□□□□ -0.41
ITGB1-202ENST00000396033 TCTN1Q2MV58 587 aa12.46□□□□□ -0.41
ITGB1-202ENST00000396033 TTC9BQ8N6N2 239 aa12.46□□□□□ -0.41
ITGB1-202ENST00000396033 HAPLN3Q96S86 360 aa12.46□□□□□ -0.41
ITGB1-202ENST00000396033 FBXO44Q9H4M3 255 aa12.46□□□□□ -0.41
ITGB1-202ENST00000396033 OR6C75A6NL08 312 aa12.46□□□□□ -0.42
ITGB1-202ENST00000396033 MTSS1O43312 755 aa12.46□□□□□ -0.42
ITGB1-202ENST00000396033 FAM155BO75949 473 aa12.46□□□□□ -0.42
ITGB1-202ENST00000396033 CRADDP78560 199 aa12.46□□□□□ -0.42
ITGB1-202ENST00000396033 SEPT7Q16181 437 aaKnown RBP12.46□□□□□ -0.42
ITGB1-202ENST00000396033 HHATQ5VTY9 493 aa12.46□□□□□ -0.42
ITGB1-202ENST00000396033 NPAS4Q8IUM7 802 aa12.46□□□□□ -0.42
ITGB1-202ENST00000396033 SCLYQ96I15 445 aa12.46□□□□□ -0.42
ITGB1-202ENST00000396033 SERPINB11Q96P15 392 aa12.46□□□□□ -0.42
ITGB1-202ENST00000396033 OSER1Q9NX31 292 aa12.46□□□□□ -0.42
ITGB1-202ENST00000396033 SDR42E2A6NKP2 422 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 ZWINTO95229 277 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 MGAT1P26572 445 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 SLC1A5Q15758 541 aa12.45□□□□□ -0.42
ITGB1-202ENST00000396033 TTC39BQ5VTQ0 682 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms