RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 ABCB8Q9NUT2 735 aa14.27□□□□□ -0.13
VCPKMT-201ENST00000395859 GGA2Q9UJY4 613 aa14.27□□□□□ -0.13
VCPKMT-201ENST00000395859 ACSL6Q9UKU0 697 aa14.27□□□□□ -0.13
VCPKMT-201ENST00000395859 KIF3AQ9Y496 699 aa14.27□□□□□ -0.13
VCPKMT-201ENST00000395859 TDRD6O60522 2096 aaKnown RBP14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 ITPR3Q14573 2671 aa14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 MAGEC1O60732 1142 aa14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 RNASEH2AO75792 299 aaKnown RBP14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 PABPC1P11940 636 aaKnown RBP14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 GAP43P17677 238 aa14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 HOXD13P35453 343 aa14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 PDX1P52945 283 aa14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 ALCAMQ13740 583 aa14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 TBR1Q16650 682 aa14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 MPPE1Q53F39 396 aa14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 C9orf64Q5T6V5 341 aa14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 TMC6Q7Z403 805 aa14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 TADA2BQ86TJ2 420 aa14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 C12orf29Q8N999 325 aa14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 GANCQ8TET4 914 aa14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 HPS3Q969F9 1004 aa14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 TTC17Q96AE7 1141 aa14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 MRGPRX3Q96LB0 322 aa14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 FAM129BQ96TA1 746 aa14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 CGRRF1Q99675 332 aa14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 USP29Q9HBJ7 922 aa14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 GEMIN8Q9NWZ8 242 aaKnown RBP14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 HMGXB4Q9UGU5 601 aa14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 NAGPAQ9UK23 515 aa14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 PAXBP1Q9Y5B6 917 aa14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 OTOGQ6ZRI0 2925 aa14.26□□□□□ -0.13
VCPKMT-201ENST00000395859 NYNRINQ9P2P1 1898 aaKnown RBP14.25□□□□□ -0.13
VCPKMT-201ENST00000395859 POLQO75417 2590 aa14.25□□□□□ -0.13
VCPKMT-201ENST00000395859 BLACEA4D250 179 aa14.25□□□□□ -0.13
VCPKMT-201ENST00000395859 PPFIA2O75334 1257 aa14.25□□□□□ -0.13
VCPKMT-201ENST00000395859 HMBSP08397 361 aa14.25□□□□□ -0.13
VCPKMT-201ENST00000395859 ITGA2BP08514 1039 aa14.25□□□□□ -0.13
VCPKMT-201ENST00000395859 GOT1P17174 413 aa14.25□□□□□ -0.13
VCPKMT-201ENST00000395859 EFEMP1Q12805 493 aa14.25□□□□□ -0.13
VCPKMT-201ENST00000395859 SFSWAPQ12872 951 aaKnown RBP14.25□□□□□ -0.13
VCPKMT-201ENST00000395859 PSMD6Q15008 389 aa14.25□□□□□ -0.13
VCPKMT-201ENST00000395859 TRIP4Q15650 581 aaPredicted RBP14.25□□□□□ -0.13
VCPKMT-201ENST00000395859 IGFBP7Q16270 282 aa14.25□□□□□ -0.13
VCPKMT-201ENST00000395859 USP53Q70EK8 1073 aa14.25□□□□□ -0.13
VCPKMT-201ENST00000395859 SYCP3Q8IZU3 236 aa14.25□□□□□ -0.13
VCPKMT-201ENST00000395859 NOC3LQ8WTT2 800 aaKnown RBP14.25□□□□□ -0.13
VCPKMT-201ENST00000395859 CDK5RAP1Q96SZ6 601 aaKnown RBP14.25□□□□□ -0.13
VCPKMT-201ENST00000395859 ARHGAP9Q9BRR9 750 aa14.25□□□□□ -0.13
VCPKMT-201ENST00000395859 OSBPL2Q9H1P3 480 aa14.25□□□□□ -0.13
VCPKMT-201ENST00000395859 KLHL11Q9NVR0 708 aa14.25□□□□□ -0.13
VCPKMT-201ENST00000395859 NLGN3Q9NZ94 848 aa14.25□□□□□ -0.13
VCPKMT-201ENST00000395859 CYTH4Q9UIA0 394 aa14.25□□□□□ -0.13
VCPKMT-201ENST00000395859 RASAL2Q9UJF2 1139 aa14.25□□□□□ -0.13
VCPKMT-201ENST00000395859 PIAS2O75928 621 aa14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 GJB6O95452 261 aa14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 ATP5BP06576 529 aaKnown RBP14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 FAM200BP0CF97 657 aa14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 DLATP10515 647 aaKnown RBP14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 SLC8A1P32418 973 aa14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 CD70P32970 193 aa14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 DRD3P35462 400 aa14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 NUDT1P36639 197 aa14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 SGSHP51688 502 aa14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 NEK4P51957 841 aa14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 CLCA4Q14CN2 919 aa14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 SND1Q7KZF4 910 aaKnown RBP eCLIP14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 MMAAQ8IVH4 418 aaKnown RBP14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 ARL14Q8N4G2 192 aa14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 KDM1BQ8NB78 822 aa14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 TMEM145Q8NBT3 493 aa14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 MAPK15Q8TD08 544 aa14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 SYAP1Q96A49 352 aaPredicted RBP14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 OMDQ99983 421 aa14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 FUCA2Q9BTY2 467 aa14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 INTS6Q9UL03 887 aaKnown RBP14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 DMTF1Q9Y222 760 aa14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 PCDHGA7Q9Y5G6 932 aa14.24□□□□□ -0.13
VCPKMT-201ENST00000395859 FFAR2O15552 330 aa14.23□□□□□ -0.13
VCPKMT-201ENST00000395859 TNFSF15O95150 251 aa14.23□□□□□ -0.13
VCPKMT-201ENST00000395859 THEGLP0DJG4 465 aa14.23□□□□□ -0.13
VCPKMT-201ENST00000395859 RALAP11233 206 aa14.23□□□□□ -0.13
VCPKMT-201ENST00000395859 TNNI1P19237 187 aa14.23□□□□□ -0.13
VCPKMT-201ENST00000395859 LONP1P36776 959 aaKnown RBP14.23□□□□□ -0.13
VCPKMT-201ENST00000395859 ZNF445P59923 1031 aa14.23□□□□□ -0.13
VCPKMT-201ENST00000395859 CYP24A1Q07973 514 aa14.23□□□□□ -0.13
VCPKMT-201ENST00000395859 TGIF1Q15583 401 aa14.23□□□□□ -0.13
VCPKMT-201ENST00000395859 SNRNP35Q16560 246 aaKnown RBP14.23□□□□□ -0.13
VCPKMT-201ENST00000395859 OR14C36Q8NHC7 312 aa14.23□□□□□ -0.13
VCPKMT-201ENST00000395859 WDR36Q8NI36 951 aaKnown RBP14.23□□□□□ -0.13
VCPKMT-201ENST00000395859 ZNF564Q8TBZ8 553 aaPredicted RBP14.23□□□□□ -0.13
VCPKMT-201ENST00000395859 IFI44Q8TCB0 444 aa14.23□□□□□ -0.13
VCPKMT-201ENST00000395859 PLD4Q96BZ4 506 aa14.23□□□□□ -0.13
VCPKMT-201ENST00000395859 UPF2Q9HAU5 1272 aaKnown RBP14.23□□□□□ -0.13
VCPKMT-201ENST00000395859 KIAA1586Q9HCI6 787 aa14.23□□□□□ -0.13
VCPKMT-201ENST00000395859 FAM49BQ9NUQ9 324 aa14.23□□□□□ -0.13
VCPKMT-201ENST00000395859 MARCH2Q9P0N8 246 aa14.23□□□□□ -0.13
VCPKMT-201ENST00000395859 ITIH6Q6UXX5 1313 aa14.22□□□□□ -0.13
VCPKMT-201ENST00000395859 TARSL2A2RTX5 802 aaKnown RBP14.22□□□□□ -0.13
VCPKMT-201ENST00000395859 K7ESM1 405 aa14.22□□□□□ -0.13
VCPKMT-201ENST00000395859 SCAMP1O15126 338 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms