RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 RSRC2Q7L4I2 434 aaKnown RBP11.85□□□□□ -0.51
RTN1-203ENST00000395090 CTAGE6Q86UF2 777 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 CTAGE4Q8IX94 777 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 DMRTC2Q8IXT2 367 aaPredicted RBP11.85□□□□□ -0.51
RTN1-203ENST00000395090 MRPL43Q8N983 215 aaKnown RBP11.85□□□□□ -0.51
RTN1-203ENST00000395090 TEKT4Q8WW24 435 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 AUTS2Q8WXX7 1259 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 PEBP4Q96S96 227 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 NAP1L3Q99457 506 aaPredicted RBP11.85□□□□□ -0.51
RTN1-203ENST00000395090 SEPT5Q99719 369 aaPredicted RBP11.85□□□□□ -0.51
RTN1-203ENST00000395090 C17orf80Q9BSJ5 609 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 TTLL2Q9BWV7 592 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 RAB6CQ9H0N0 254 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 ABCC13Q9NSE7 274 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 EHD2Q9NZN4 543 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 CALCOCO1Q9P1Z2 691 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 STAP1Q9ULZ2 295 aa11.85□□□□□ -0.51
RTN1-203ENST00000395090 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.85□□□□□ -0.51
RTN1-203ENST00000395090 CEP290O15078 2479 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 C3orf70A6NLC5 250 aaPredicted RBP11.84□□□□□ -0.51
RTN1-203ENST00000395090 CAPN9O14815 690 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 FSCN2O14926 492 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 PRPSAP2O60256 369 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 SOAT2O75908 522 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 F9P00740 461 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 IGLV3-25P01717 112 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 FGGP02679 453 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 ZDHHC11BP0C7U3 371 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 NCAM1P13591 858 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 DNAJB1P25685 340 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 YWHAQP27348 245 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 CTNNB1P35222 781 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 PTPN7P35236 360 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 PGFP49763 221 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 ARSEP51690 589 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 ERVK-21P61565 698 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 YWHAGP61981 247 aaKnown RBP eCLIP11.84□□□□□ -0.51
RTN1-203ENST00000395090 PITX1P78337 314 aaPredicted RBP11.84□□□□□ -0.51
RTN1-203ENST00000395090 AADACL2Q6P093 401 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 SLC13A5Q86YT5 568 aaPredicted RBP11.84□□□□□ -0.51
RTN1-203ENST00000395090 ARHGAP18Q8N392 663 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 RAPGEF5Q92565 580 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 GOLGA1Q92805 767 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 SAMD11Q96NU1 681 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 CCSER2Q9H7U1 834 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 ALG13Q9NP73 1137 aaKnown RBP11.84□□□□□ -0.51
RTN1-203ENST00000395090 NGRNQ9NPE2 291 aaKnown RBP11.84□□□□□ -0.51
RTN1-203ENST00000395090 TMEM51Q9NW97 253 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 CLIC5Q9NZA1 410 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 SMARCAL1Q9NZC9 954 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 PCSK1NQ9UHG2 260 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 EFR3BQ9Y2G0 817 aa11.84□□□□□ -0.51
RTN1-203ENST00000395090 C2orf71A6NGG8 1288 aa11.83□□□□□ -0.52
RTN1-203ENST00000395090 SLC38A8A6NNN8 435 aa11.83□□□□□ -0.52
RTN1-203ENST00000395090 M0QYT0 321 aa11.83□□□□□ -0.52
RTN1-203ENST00000395090 MDM4O15151 490 aa11.83□□□□□ -0.52
RTN1-203ENST00000395090 EIF4EBP3O60516 100 aaPredicted RBP11.83□□□□□ -0.52
RTN1-203ENST00000395090 LIG3P49916 1009 aa11.83□□□□□ -0.52
RTN1-203ENST00000395090 C19orf57Q0VDD7 668 aa11.83□□□□□ -0.52
RTN1-203ENST00000395090 CAMK1Q14012 370 aa11.83□□□□□ -0.52
RTN1-203ENST00000395090 CDO1Q16878 200 aa11.83□□□□□ -0.52
RTN1-203ENST00000395090 LONRF2Q1L5Z9 754 aa11.83□□□□□ -0.52
RTN1-203ENST00000395090 SEL1L2Q5TEA6 688 aa11.83□□□□□ -0.52
RTN1-203ENST00000395090 ANKS1BQ7Z6G8 1248 aa11.83□□□□□ -0.52
RTN1-203ENST00000395090 VSIG1Q86XK7 387 aa11.83□□□□□ -0.52
RTN1-203ENST00000395090 PSTKQ8IV42 348 aaKnown RBP11.83□□□□□ -0.52
RTN1-203ENST00000395090 ZDHHC14Q8IZN3 488 aa11.83□□□□□ -0.52
RTN1-203ENST00000395090 MMGT1Q8N4V1 131 aa11.83□□□□□ -0.52
RTN1-203ENST00000395090 ZNF276Q8N554 614 aa11.83□□□□□ -0.52
RTN1-203ENST00000395090 FAM71BQ8TC56 605 aa11.83□□□□□ -0.52
RTN1-203ENST00000395090 RBM41Q96IZ5 413 aaKnown RBP11.83□□□□□ -0.52
RTN1-203ENST00000395090 MYRFLQ96LU7 910 aa11.83□□□□□ -0.52
RTN1-203ENST00000395090 KLHL5Q96PQ7 755 aa11.83□□□□□ -0.52
RTN1-203ENST00000395090 SLITRK1Q96PX8 696 aa11.83□□□□□ -0.52
RTN1-203ENST00000395090 TCF25Q9BQ70 676 aa11.83□□□□□ -0.52
RTN1-203ENST00000395090 NMUR1Q9HB89 426 aa11.83□□□□□ -0.52
RTN1-203ENST00000395090 CYP4F11Q9HBI6 524 aa11.83□□□□□ -0.52
RTN1-203ENST00000395090 SRA1Q9HD15 236 aaKnown RBP11.83□□□□□ -0.52
RTN1-203ENST00000395090 LAMA2P24043 3122 aaKnown RBP11.83□□□□□ -0.52
RTN1-203ENST00000395090 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.82□□□□□ -0.52
RTN1-203ENST00000395090 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.82□□□□□ -0.52
RTN1-203ENST00000395090 CCDC188H7C350 402 aa11.82□□□□□ -0.52
RTN1-203ENST00000395090 CA3P07451 260 aa11.82□□□□□ -0.52
RTN1-203ENST00000395090 HMGA1P17096 107 aaKnown RBP11.82□□□□□ -0.52
RTN1-203ENST00000395090 KDELR1P24390 212 aa11.82□□□□□ -0.52
RTN1-203ENST00000395090 GBP2P32456 591 aaPredicted RBP11.82□□□□□ -0.52
RTN1-203ENST00000395090 RDXP35241 583 aaKnown RBP11.82□□□□□ -0.52
RTN1-203ENST00000395090 CDKN2BP42772 138 aa11.82□□□□□ -0.52
RTN1-203ENST00000395090 CXCR3P49682 368 aa11.82□□□□□ -0.52
RTN1-203ENST00000395090 SULT1E1P49888 294 aa11.82□□□□□ -0.52
RTN1-203ENST00000395090 RACK1P63244 317 aaKnown RBP11.82□□□□□ -0.52
RTN1-203ENST00000395090 TAF10Q12962 218 aa11.82□□□□□ -0.52
RTN1-203ENST00000395090 KLF1Q13351 362 aaPredicted RBP11.82□□□□□ -0.52
RTN1-203ENST00000395090 SIX1Q15475 284 aaPredicted RBP11.82□□□□□ -0.52
RTN1-203ENST00000395090 PPP2R5EQ16537 467 aa11.82□□□□□ -0.52
RTN1-203ENST00000395090 KCNT1Q5JUK3 1230 aa11.82□□□□□ -0.52
RTN1-203ENST00000395090 ERMARDQ5T6L9 678 aa11.82□□□□□ -0.52
RTN1-203ENST00000395090 SNX30Q5VWJ9 437 aa11.82□□□□□ -0.52
RTN1-203ENST00000395090 BTBD8Q5XKL5 378 aa11.82□□□□□ -0.52
RTN1-203ENST00000395090 MFSD7Q6UXD7 560 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms