RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 ANAPC7Q9UJX3 599 aa20.55■□□□□ 0.88
SNCA-203ENST00000394986 SOWAHDA6NJG2 315 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 CHURC1-FNTBB4DL54 471 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 E9PAM4 449 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 FAM72CH0Y354 149 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 H0Y626 953 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 SRGAP2O75044 1071 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 PABPC1P11940 636 aaKnown RBP20.54■□□□□ 0.88
SNCA-203ENST00000394986 WASP42768 502 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 CCR3P51677 355 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 NUBP1P53384 320 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 CSTF1Q05048 431 aaKnown RBP20.54■□□□□ 0.88
SNCA-203ENST00000394986 FUT11Q495W5 492 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 ALFQ53S48 1182 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 FAM72AQ5TYM5 149 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 FAM72DQ6L9T8 149 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 NUDT18Q6ZVK8 323 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 CHST9Q7L1S5 443 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 FAM72BQ86X60 149 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 PYROXD2Q8N2H3 581 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.54■□□□□ 0.88
SNCA-203ENST00000394986 ZNF513Q8N8E2 541 aaPredicted RBP20.54■□□□□ 0.88
SNCA-203ENST00000394986 TXNDC5Q8NBS9 432 aaKnown RBP20.54■□□□□ 0.88
SNCA-203ENST00000394986 FNIP1Q8TF40 1166 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 NTAN1Q96AB6 310 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 LMLNQ96KR4 655 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 C1orf74Q96LT6 269 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 PEBP4Q96S96 227 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 CIPCQ9C0C6 399 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 GPATCH2LQ9NWQ4 482 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 MPP6Q9NZW5 540 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 CTTNBP2NLQ9P2B4 639 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 PCSK1NQ9UHG2 260 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 WDFY4Q6ZS81 3184 aa20.54■□□□□ 0.88
SNCA-203ENST00000394986 A0A1B0GVM2 712 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 TCAF2A6NFQ2 919 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 SGK1O00141 431 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 TMEM253P0C7T8 217 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 FECHP22830 423 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 CXCL12P48061 93 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 MRPS21P82921 87 aaKnown RBP20.53■□□□□ 0.88
SNCA-203ENST00000394986 C5orf22Q49AR2 442 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 TTC39BQ5VTQ0 682 aaPredicted RBP20.53■□□□□ 0.88
SNCA-203ENST00000394986 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.53■□□□□ 0.88
SNCA-203ENST00000394986 SLFN11Q7Z7L1 901 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 ADIPOR2Q86V24 386 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 ZNF564Q8TBZ8 553 aaPredicted RBP20.53■□□□□ 0.88
SNCA-203ENST00000394986 ERLEC1Q96DZ1 483 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 OR12D3Q9UGF7 316 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 STARD13Q9Y3M8 1113 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 ATG13O75143 517 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 LRCH4O75427 683 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 HNRNPLP14866 589 aaKnown RBP eCLIP20.53■□□□□ 0.88
SNCA-203ENST00000394986 TCF4P15884 667 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 DESP17661 470 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 SCAPQ12770 1279 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 LRRC31Q6UY01 552 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 TFAP2DQ7Z6R9 452 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 KIAA0907Q7Z7F0 614 aaPredicted RBP20.53■□□□□ 0.88
SNCA-203ENST00000394986 CPNE8Q86YQ8 564 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 CCDC117Q8IWD4 279 aaPredicted RBP20.53■□□□□ 0.88
SNCA-203ENST00000394986 OR52K2Q8NGK3 314 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 CCDC26Q8TAB7 109 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 ACDQ96AP0 544 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 GRPEL1Q9HAV7 217 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 OSGEPQ9NPF4 335 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 ELOVL2Q9NXB9 296 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 CACNA2D2Q9NY47 1150 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 IMPACTQ9P2X3 320 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 INTS6Q9UL03 887 aaKnown RBP20.53■□□□□ 0.88
SNCA-203ENST00000394986 FZD10Q9ULW2 581 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 MMP17Q9ULZ9 603 aa20.53■□□□□ 0.88
SNCA-203ENST00000394986 MUC6Q6W4X9 2439 aa20.52■□□□□ 0.88
SNCA-203ENST00000394986 IGLV3-10A0A075B6K4 115 aa20.52■□□□□ 0.87
SNCA-203ENST00000394986 DRGXA6NNA5 263 aa20.52■□□□□ 0.87
SNCA-203ENST00000394986 ADAM23O75077 832 aa20.52■□□□□ 0.87
SNCA-203ENST00000394986 RNF8O76064 485 aa20.52■□□□□ 0.87
SNCA-203ENST00000394986 MIPP30301 263 aa20.52■□□□□ 0.87
SNCA-203ENST00000394986 CSKP41240 450 aa20.52■□□□□ 0.87
SNCA-203ENST00000394986 DMWDQ09019 674 aa20.52■□□□□ 0.87
SNCA-203ENST00000394986 DMC1Q14565 340 aa20.52■□□□□ 0.87
SNCA-203ENST00000394986 EFHC2Q5JST6 749 aa20.52■□□□□ 0.87
SNCA-203ENST00000394986 MBLAC2Q68D91 279 aa20.52■□□□□ 0.87
SNCA-203ENST00000394986 CXorf57Q6NSI4 855 aaKnown RBP20.52■□□□□ 0.87
SNCA-203ENST00000394986 MAMSTRQ6ZN01 415 aa20.52■□□□□ 0.87
SNCA-203ENST00000394986 SYT13Q7L8C5 426 aa20.52■□□□□ 0.87
SNCA-203ENST00000394986 AHI1Q8N157 1196 aa20.52■□□□□ 0.87
SNCA-203ENST00000394986 WFIKKN2Q8TEU8 576 aa20.52■□□□□ 0.87
SNCA-203ENST00000394986 CYB5D2Q8WUJ1 264 aa20.52■□□□□ 0.87
SNCA-203ENST00000394986 HHIPQ96QV1 700 aa20.52■□□□□ 0.87
SNCA-203ENST00000394986 OSBPL2Q9H1P3 480 aa20.52■□□□□ 0.87
SNCA-203ENST00000394986 TFR2Q9UP52 801 aa20.52■□□□□ 0.87
SNCA-203ENST00000394986 NEU3Q9UQ49 428 aa20.52■□□□□ 0.87
SNCA-203ENST00000394986 GOLGA6L3A6NEY3 463 aa20.51■□□□□ 0.87
SNCA-203ENST00000394986 WASH3PC4AMC7 463 aa20.51■□□□□ 0.87
SNCA-203ENST00000394986 K7ESF4 209 aa20.51■□□□□ 0.87
SNCA-203ENST00000394986 CLDN11O75508 207 aa20.51■□□□□ 0.87
SNCA-203ENST00000394986 LRIG2O94898 1065 aa20.51■□□□□ 0.87
SNCA-203ENST00000394986 SP9P0CG40 484 aa20.51■□□□□ 0.87
SNCA-203ENST00000394986 TDGF1P13385 188 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms