RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 SLC4A11Q8NBS3 891 aa20.49■□□□□ 0.87
UPK3B-203ENST00000394849 RFFLQ8WZ73 363 aa20.49■□□□□ 0.87
UPK3B-203ENST00000394849 TTC17Q96AE7 1141 aa20.49■□□□□ 0.87
UPK3B-203ENST00000394849 OMDQ99983 421 aa20.49■□□□□ 0.87
UPK3B-203ENST00000394849 ULBP1Q9BZM6 244 aa20.49■□□□□ 0.87
UPK3B-203ENST00000394849 LRRC4Q9HBW1 653 aa20.49■□□□□ 0.87
UPK3B-203ENST00000394849 GDPD2Q9HCC8 539 aa20.49■□□□□ 0.87
UPK3B-203ENST00000394849 TMEM8AQ9HCN3 771 aa20.49■□□□□ 0.87
UPK3B-203ENST00000394849 CISHQ9NSE2 258 aa20.49■□□□□ 0.87
UPK3B-203ENST00000394849 MGAQ8IWI9 3026 aa20.48■□□□□ 0.87
UPK3B-203ENST00000394849 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.48■□□□□ 0.87
UPK3B-203ENST00000394849 TARSL2A2RTX5 802 aaKnown RBP20.48■□□□□ 0.87
UPK3B-203ENST00000394849 TYW5A2RUC4 315 aaKnown RBP20.48■□□□□ 0.87
UPK3B-203ENST00000394849 MAGEC1O60732 1142 aa20.48■□□□□ 0.87
UPK3B-203ENST00000394849 CKMT2P17540 419 aa20.48■□□□□ 0.87
UPK3B-203ENST00000394849 CMA1P23946 247 aa20.48■□□□□ 0.87
UPK3B-203ENST00000394849 RPL13P26373 211 aaKnown RBP20.48■□□□□ 0.87
UPK3B-203ENST00000394849 RAD23BP54727 409 aa20.48■□□□□ 0.87
UPK3B-203ENST00000394849 PPP3CAQ08209 521 aa20.48■□□□□ 0.87
UPK3B-203ENST00000394849 CST6Q15828 149 aa20.48■□□□□ 0.87
UPK3B-203ENST00000394849 KMT5BQ4FZB7 885 aa20.48■□□□□ 0.87
UPK3B-203ENST00000394849 PIK3R6Q5UE93 754 aa20.48■□□□□ 0.87
UPK3B-203ENST00000394849 BSPRYQ5W0U4 402 aa20.48■□□□□ 0.87
UPK3B-203ENST00000394849 NUGGCQ68CJ6 796 aa20.48■□□□□ 0.87
UPK3B-203ENST00000394849 KRT39Q6A163 491 aa20.48■□□□□ 0.87
UPK3B-203ENST00000394849 ZC3H3Q8IXZ2 948 aaKnown RBP20.48■□□□□ 0.87
UPK3B-203ENST00000394849 FIBINQ8TAL6 211 aa20.48■□□□□ 0.87
UPK3B-203ENST00000394849 AZIN2Q96A70 460 aa20.48■□□□□ 0.87
UPK3B-203ENST00000394849 MAST4O15021 2626 aa20.48■□□□□ 0.87
UPK3B-203ENST00000394849 ATMQ13315 3056 aa20.47■□□□□ 0.87
UPK3B-203ENST00000394849 A0A1B0GVL5 298 aa20.47■□□□□ 0.87
UPK3B-203ENST00000394849 A0A1W2PR77 199 aa20.47■□□□□ 0.87
UPK3B-203ENST00000394849 C10orf142B7Z368 130 aa20.47■□□□□ 0.87
UPK3B-203ENST00000394849 ERVH48-1M5A8F1 160 aa20.47■□□□□ 0.87
UPK3B-203ENST00000394849 TLR4O00206 839 aa20.47■□□□□ 0.87
UPK3B-203ENST00000394849 RNASEH2AO75792 299 aaKnown RBP20.47■□□□□ 0.87
UPK3B-203ENST00000394849 WNT1P04628 370 aa20.47■□□□□ 0.87
UPK3B-203ENST00000394849 PFKFB1P16118 471 aa20.47■□□□□ 0.87
UPK3B-203ENST00000394849 NR2F2P24468 414 aa20.47■□□□□ 0.87
UPK3B-203ENST00000394849 CD70P32970 193 aa20.47■□□□□ 0.87
UPK3B-203ENST00000394849 NUDT1P36639 197 aa20.47■□□□□ 0.87
UPK3B-203ENST00000394849 E2F1Q01094 437 aa20.47■□□□□ 0.87
UPK3B-203ENST00000394849 CFHR1Q03591 330 aa20.47■□□□□ 0.87
UPK3B-203ENST00000394849 TLE3Q04726 772 aa20.47■□□□□ 0.87
UPK3B-203ENST00000394849 PRAMEF14Q5SWL7 426 aa20.47■□□□□ 0.87
UPK3B-203ENST00000394849 BHLHA9Q7RTU4 235 aa20.47■□□□□ 0.87
UPK3B-203ENST00000394849 CCDC117Q8IWD4 279 aaPredicted RBP20.47■□□□□ 0.87
UPK3B-203ENST00000394849 SCML4Q8N228 414 aa20.47■□□□□ 0.87
UPK3B-203ENST00000394849 WBP1Q96G27 269 aa20.47■□□□□ 0.87
UPK3B-203ENST00000394849 DDX50Q9BQ39 737 aaKnown RBP20.47■□□□□ 0.87
UPK3B-203ENST00000394849 NEUROG2Q9H2A3 272 aa20.47■□□□□ 0.87
UPK3B-203ENST00000394849 HESX1Q9UBX0 185 aa20.47■□□□□ 0.87
UPK3B-203ENST00000394849 SFMBT1Q9UHJ3 866 aa20.47■□□□□ 0.87
UPK3B-203ENST00000394849 CLCA2Q9UQC9 943 aa20.47■□□□□ 0.87
UPK3B-203ENST00000394849 ARID1BQ8NFD5 2236 aaPredicted RBP20.46■□□□□ 0.87
UPK3B-203ENST00000394849 COL6A6A6NMZ7 2263 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 A0A1W2PP55 124 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 J3QKU1 62 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 CBX4O00257 560 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 MID1O15344 667 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 BRINP1O60477 761 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 TBL1XO60907 577 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 SIN3BO75182 1162 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 TRIM49P0CI25 452 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 TRIM49CP0CI26 452 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 GLDCP23378 1020 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 PSMC2P35998 433 aaKnown RBP20.46■□□□□ 0.87
UPK3B-203ENST00000394849 NXPH1P58417 271 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 BST2Q10589 180 aaKnown RBP20.46■□□□□ 0.87
UPK3B-203ENST00000394849 OVGP1Q12889 678 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 KCNJ12Q14500 433 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 TBC1D25Q3MII6 688 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 SFMBT2Q5VUG0 894 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 SND1Q7KZF4 910 aaKnown RBP eCLIP20.46■□□□□ 0.87
UPK3B-203ENST00000394849 MFN1Q8IWA4 741 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 FAM186BQ8IYM0 893 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 SIX6OS1Q8N1H7 587 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 MFSD2AQ8NA29 543 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 HJURPQ8NCD3 748 aaPredicted RBP20.46■□□□□ 0.87
UPK3B-203ENST00000394849 MYO19Q96H55 970 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 SERAC1Q96JX3 654 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 EBF2Q9HAK2 575 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 CNGB3Q9NQW8 809 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 SERGEFQ9UGK8 458 aa20.46■□□□□ 0.87
UPK3B-203ENST00000394849 GOLGA6L4A6NEF3 574 aa20.45■□□□□ 0.86
UPK3B-203ENST00000394849 STX10O60499 249 aa20.45■□□□□ 0.86
UPK3B-203ENST00000394849 ADH1BP00325 375 aa20.45■□□□□ 0.86
UPK3B-203ENST00000394849 SRPRAP08240 638 aaKnown RBP20.45■□□□□ 0.86
UPK3B-203ENST00000394849 GOT1P17174 413 aa20.45■□□□□ 0.86
UPK3B-203ENST00000394849 C5AR1P21730 350 aa20.45■□□□□ 0.86
UPK3B-203ENST00000394849 ACP1P24666 158 aa20.45■□□□□ 0.86
UPK3B-203ENST00000394849 SLC8A1P32418 973 aa20.45■□□□□ 0.86
UPK3B-203ENST00000394849 UCNP55089 124 aa20.45■□□□□ 0.86
UPK3B-203ENST00000394849 MCCD1P59942 119 aaPredicted RBP20.45■□□□□ 0.86
UPK3B-203ENST00000394849 ADIGQ0VDE8 80 aa20.45■□□□□ 0.86
UPK3B-203ENST00000394849 C9orf64Q5T6V5 341 aa20.45■□□□□ 0.86
UPK3B-203ENST00000394849 MSANTD2Q6P1R3 559 aa20.45■□□□□ 0.86
UPK3B-203ENST00000394849 IQCHQ86VS3 1027 aa20.45■□□□□ 0.86
UPK3B-203ENST00000394849 MMAAQ8IVH4 418 aaKnown RBP20.45■□□□□ 0.86
UPK3B-203ENST00000394849 DCBLD1Q8N8Z6 715 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms