RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 ANKRD20A4Q4UJ75 823 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 PAN2Q504Q3 1202 aaKnown RBP13.55□□□□□ -0.24
NFKB1-202ENST00000394820 MTHFD1LQ6UB35 978 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 ZPBP2Q6X784 338 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 EGFL6Q8IUX8 553 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 DDIASQ8IXT1 998 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 GPC2Q8N158 579 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 LENG8Q96PV6 779 aaPredicted RBP13.55□□□□□ -0.24
NFKB1-202ENST00000394820 SNRNP25Q9BV90 132 aaKnown RBP13.55□□□□□ -0.24
NFKB1-202ENST00000394820 NIFKQ9BYG3 293 aaKnown RBP13.55□□□□□ -0.24
NFKB1-202ENST00000394820 C2orf40Q9H1Z8 148 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 KRT82Q9NSB4 513 aa13.55□□□□□ -0.24
NFKB1-202ENST00000394820 RUVBL2Q9Y230 463 aaKnown RBP13.55□□□□□ -0.24
NFKB1-202ENST00000394820 TIMM13Q9Y5L4 95 aaPredicted RBP13.55□□□□□ -0.24
NFKB1-202ENST00000394820 MYH9P35579 1960 aaKnown RBP13.55□□□□□ -0.24
NFKB1-202ENST00000394820 A0A096LPK6 155 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 SIN3BO75182 1162 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 METTL18O95568 372 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 DLDP09622 509 aaKnown RBP13.54□□□□□ -0.24
NFKB1-202ENST00000394820 IQCF3P0C7M6 154 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 HNRNPLP14866 589 aaKnown RBP eCLIP13.54□□□□□ -0.244e-7■■□□□ 13
NFKB1-202ENST00000394820 PSMB4P28070 264 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 HDAC4P56524 1084 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 ZNF252P-AS1Q0IIN9 211 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 POU6F1Q14863 301 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 WDTC1Q8N5D0 677 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 C1orf127Q8N9H9 656 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 TMEM79Q9BSE2 394 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 CYLDQ9NQC7 956 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 XPNPEP3Q9NQH7 507 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 RBPJLQ9UBG7 517 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 AP4E1Q9UPM8 1137 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 SPTLC1O15269 473 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 HCRTO43612 131 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 HOXC6P09630 235 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 NR4A1P22736 598 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 GHRHRQ02643 423 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 TAP1Q03518 808 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 TMEM132DQ14C87 1099 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 FAM183BPQ6ZVS7 135 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 MYO1HQ8N1T3 1032 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 NAT16Q8N8M0 369 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 CDCA5Q96FF9 252 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 TMEM176AQ96HP8 235 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 CNPY3Q9BT09 278 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 NT5C1AQ9BXI3 368 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 TMEM134Q9H6X4 195 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 SETD4Q9NVD3 440 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 TMEM216Q9P0N5 145 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 CYTH4Q9UIA0 394 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 NUDT5Q9UKK9 219 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 DRG1Q9Y295 367 aaKnown RBP13.54□□□□□ -0.24
NFKB1-202ENST00000394820 MFHAS1Q9Y4C4 1052 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 KPNA7A9QM74 516 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 WFS1O76024 890 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 PIGNO95427 931 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 PRAMEF19Q5SWL8 479 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 ITPRIPL1Q6GPH6 555 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 ARMCX2Q7L311 632 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 ERO1BQ86YB8 467 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 ANKRD13AQ8IZ07 590 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 APBA2Q99767 749 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 OXCT2Q9BYC2 517 aaPredicted RBP13.54□□□□□ -0.24
NFKB1-202ENST00000394820 SDCBP2Q9H190 292 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 ERAP1Q9NZ08 941 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 CPSF3Q9UKF6 684 aaKnown RBP13.54□□□□□ -0.24
NFKB1-202ENST00000394820 ADAMTS5Q9UNA0 930 aa13.54□□□□□ -0.24
NFKB1-202ENST00000394820 HBP1O60381 514 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 RTN3O95197 1032 aaPredicted RBP13.53□□□□□ -0.24
NFKB1-202ENST00000394820 POLBP06746 335 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 GOT1P17174 413 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 AKAP5P24588 427 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 MPSTP25325 297 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 ABCD1P33897 745 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 AGKQ53H12 422 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 BNC2Q6ZN30 1099 aaPredicted RBP13.53□□□□□ -0.24
NFKB1-202ENST00000394820 RPS27LQ71UM5 84 aaKnown RBP13.53□□□□□ -0.24
NFKB1-202ENST00000394820 ELOVL4Q9GZR5 314 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 S100A14Q9HCY8 104 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 BRCA2P51587 3418 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 ARHGEF37A1IGU5 675 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 FAM149AA5PLN7 773 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 SDR42E2A6NKP2 422 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 TRUB2O95900 331 aaKnown RBP13.53□□□□□ -0.24
NFKB1-202ENST00000394820 CCDC130P13994 396 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 ADORA2AP29274 412 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 CXCR3P49682 368 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 CLVS1Q8IUQ0 354 aaPredicted RBP13.53□□□□□ -0.24
NFKB1-202ENST00000394820 SLC7A14Q8TBB6 771 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 ILKAPQ9H0C8 392 aaPredicted RBP13.53□□□□□ -0.24
NFKB1-202ENST00000394820 ADNPQ9H2P0 1102 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 BCAP29Q9UHQ4 241 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 AP4B1Q9Y6B7 739 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 ATP8B3O60423 1300 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 A6NHS1 94 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 SIGLEC16A6NMB1 481 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 M0QYT0 321 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 TP73O15350 636 aa13.53□□□□□ -0.24
NFKB1-202ENST00000394820 BUD23O43709 281 aaKnown RBP13.53□□□□□ -0.24
NFKB1-202ENST00000394820 FKBP6O75344 327 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms