RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 MGAMO43451 1857 aa10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 NCAM2O15394 837 aa10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 PAPSS1O43252 624 aaPredicted RBP10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 ITM2AO43736 263 aa10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 GSRP00390 522 aa10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 VCLP18206 1134 aa10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 CYP3A5P20815 502 aa10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 RGS2P41220 211 aa10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 GRM5P41594 1212 aa10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 MAGEA12P43365 314 aa10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 GMPSP49915 693 aaPredicted RBP10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 AIF1P55008 147 aa10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 PPP1R26Q5T8A7 1209 aaPredicted RBP10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 FOXB2Q5VYV0 432 aa10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 NCBP2-AS2Q69YL0 99 aa10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 EPGNQ6UW88 154 aa10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 TMEM192Q8IY95 271 aa10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 ALDH16A1Q8IZ83 802 aa10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 SLC25A41Q8N5S1 370 aa10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 PYDC1Q8WXC3 89 aa10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 KIF12Q96FN5 646 aa10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 CNDP1Q96KN2 507 aa10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 HSFY1Q96LI6 401 aa10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 ZNF778Q96MU6 729 aa10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 SORT1Q99523 831 aa10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 ZNF395Q9H8N7 513 aaPredicted RBP10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 STK39Q9UEW8 545 aa10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 SCAF8Q9UPN6 1271 aaKnown RBP10.3□□□□□ -0.76
UBE2D3-208ENST00000394803 RNF103O00237 685 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 DENRO43583 198 aaKnown RBP10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 STRNO43815 780 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 TRIM13O60858 407 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 LYPLA1O75608 230 aaPredicted RBP10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 USP1O94782 785 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 UPP2O95045 317 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 C22orf31O95567 290 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 RAG1P15918 1043 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 ITGAXP20702 1163 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 MGAT1P26572 445 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 CLCN3P51790 818 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 LIMK2P53671 638 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 KLF10Q13118 480 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 TTLL4Q14679 1199 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 HERC3Q15034 1050 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 PDK3Q15120 406 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 OGFRL1Q5TC84 451 aaPredicted RBP10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 C16orf46Q6P387 395 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 KBTBD6Q86V97 674 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 TTC30AQ86WT1 665 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 MARVELD2Q8N4S9 558 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 ANKRD52Q8NB46 1076 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 BEST2Q8NFU1 509 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 RP9Q8TA86 221 aaKnown RBP10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 LRGUKQ96M69 825 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 KCTD15Q96SI1 283 aaPredicted RBP10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 TSPAN18Q96SJ8 248 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 RBBP8Q99708 897 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 ILKAPQ9H0C8 392 aaPredicted RBP10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 PIDD1Q9HB75 910 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 SNX15Q9NRS6 342 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 BFARQ9NZS9 450 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 RALGAPA2Q2PPJ7 1873 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 PIK3R2O00459 728 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 ATP9BO43861 1147 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 RNASEH1O60930 286 aaKnown RBP10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 RPL34P49207 117 aaKnown RBP10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 RPS6KA3P51812 740 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 ZNF135P52742 658 aaPredicted RBP10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 SESN2P58004 480 aaPredicted RBP10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 FSTL1Q12841 308 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 GRAMD1BQ3KR37 738 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 HSDL1Q3SXM5 330 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 DALRD3Q5D0E6 543 aaKnown RBP10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 SAMD7Q7Z3H4 446 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 SCUBE3Q8IX30 993 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 SLC16A10Q8TF71 515 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 DDI1Q8WTU0 396 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 OPTNQ96CV9 577 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 PGBD4Q96DM1 585 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 PIWIL1Q96J94 861 aaKnown RBP10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 LBHD1Q9BQE6 289 aaPredicted RBP10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 TCF7L2Q9NQB0 619 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 PNPOQ9NVS9 261 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 STAP1Q9ULZ2 295 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 AKT3Q9Y243 479 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 RPS6KL1Q9Y6S9 549 aa10.29□□□□□ -0.76
UBE2D3-208ENST00000394803 RGSL1A5PLK6 1076 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 PSMD3O43242 534 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 XPOTO43592 962 aaKnown RBP10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 CREB3O43889 395 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 MATKP42679 507 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 ALDH1A3P47895 512 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 POLD2P49005 469 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 NPY2RP49146 381 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 NUMBP49757 651 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 CDC42EP1Q00587 391 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 SLC10A2Q12908 348 aaPredicted RBP10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 AMHR2Q16671 573 aa10.28□□□□□ -0.76
UBE2D3-208ENST00000394803 RALGPS1Q5JS13 557 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms