RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 RABL2BQ9UNT1 228 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 COQ6Q9Y2Z9 468 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 IPPQ9Y573 584 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 WASF2Q9Y6W5 498 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 PABPN1LA6NDY0 278 aaKnown RBP5.83□□□□□ -1.48
RFFL-202ENST00000394597 CFAP99D6REC4 459 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 SPTLC1O15269 473 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 AOC2O75106 756 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 MOCS2O96007 188 aaPredicted RBP5.83□□□□□ -1.48
RFFL-202ENST00000394597 CCDC130P13994 396 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 ACAT1P24752 427 aaKnown RBP5.83□□□□□ -1.48
RFFL-202ENST00000394597 RPL9P32969 192 aaKnown RBP5.83□□□□□ -1.48
RFFL-202ENST00000394597 SCNN1GP51170 649 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 PDK2Q15119 407 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 NDUFA5Q16718 116 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 ACSBG2Q5FVE4 666 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 OVOS1Q6IE37 1185 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 SLC39A4Q6P5W5 647 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 RFWD3Q6PCD5 774 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 TTC33Q6PID6 262 aaPredicted RBP5.83□□□□□ -1.48
RFFL-202ENST00000394597 ZBTB46Q86UZ6 589 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 CYP4X1Q8N118 509 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 ZNF786Q8N393 782 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.83□□□□□ -1.48
RFFL-202ENST00000394597 SLAIN1Q8ND83 568 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 HASPINQ8TF76 798 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 RSPH1Q8WYR4 309 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 JADE3Q92613 823 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 EMID1Q96A84 441 aaPredicted RBP5.83□□□□□ -1.48
RFFL-202ENST00000394597 ALKBH8Q96BT7 664 aaKnown RBP5.83□□□□□ -1.48
RFFL-202ENST00000394597 ZFYVE19Q96K21 471 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 FIZ1Q96SL8 496 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 PCDHB18PQ96TA0 734 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 FRMD8P1Q9BZ68 369 aaPredicted RBP5.83□□□□□ -1.48
RFFL-202ENST00000394597 NOL6Q9H6R4 1146 aaKnown RBP5.83□□□□□ -1.48
RFFL-202ENST00000394597 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.83□□□□□ -1.48
RFFL-202ENST00000394597 ABI2Q9NYB9 513 aaPredicted RBP5.83□□□□□ -1.48
RFFL-202ENST00000394597 PRKAG3Q9UGI9 489 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 TAGLN3Q9UI15 199 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 USP18Q9UMW8 372 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 ITM2BQ9Y287 266 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 TELO2Q9Y4R8 837 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 STYXL1Q9Y6J8 313 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 SMIM28A0A1B0GU29 152 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 SIGLEC16A6NMB1 481 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 M0QYT0 321 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 F9P00740 461 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 GNRH1P01148 92 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 RBP3P10745 1247 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 ALADP13716 330 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 RAG1P15918 1043 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 COPAP53621 1224 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 SLC12A2P55011 1212 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 NOMO3P69849 1222 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 ELAVL2Q12926 359 aaKnown RBP5.83□□□□□ -1.48
RFFL-202ENST00000394597 MAMLD1Q13495 774 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 NFE2Q16621 373 aaPredicted RBP5.83□□□□□ -1.48
RFFL-202ENST00000394597 SLC10A6Q3KNW5 377 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 MGAT5BQ3V5L5 792 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 TFDP3Q5H9I0 405 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 ITPRIPL1Q6GPH6 555 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 PACS1Q6VY07 963 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 DHDDSQ86SQ9 333 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 ELMOD1Q8N336 334 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 C1orf127Q8N9H9 656 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 SPATA18Q8TC71 538 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 SLC2A14Q8TDB8 520 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 FAM172AQ8WUF8 416 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 ZNF516Q92618 1163 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 ZNF75CPQ92670 426 aaPredicted RBP5.83□□□□□ -1.48
RFFL-202ENST00000394597 SKA1Q96BD8 255 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 BORCS6Q96GS4 357 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 FTHL17Q9BXU8 183 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 SENP6Q9GZR1 1112 aaPredicted RBP5.83□□□□□ -1.48
RFFL-202ENST00000394597 ADA2Q9NZK5 511 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 SRRDQ9UH36 339 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 SALL4Q9UJQ4 1053 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 FBXO9Q9UK97 447 aaPredicted RBP5.83□□□□□ -1.48
RFFL-202ENST00000394597 SCN9AQ15858 1988 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 A0A0J9YVX5 310 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 EEF2KO00418 725 aaKnown RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 KCNN4O15554 427 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 ARHGEF9O43307 516 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 CSPG5O95196 566 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 PTPN1P18031 435 aaKnown RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 VCLP18206 1134 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 HOXD12P35452 270 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 GARSP41250 739 aaKnown RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 NEK3P51956 506 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 SLC6A3Q01959 620 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 YWHAHQ04917 246 aaPredicted RBP5.82□□□□□ -1.48
RFFL-202ENST00000394597 FLOT2Q14254 428 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 CTXN3Q4LDR2 81 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 KCNT1Q5JUK3 1230 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 C9orf57Q5W0N0 161 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 ELMSAN1Q6PJG2 1045 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 C17orf99Q6UX52 265 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 SPOCD1Q6ZMY3 1216 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 TAS2R42Q7RTR8 314 aa5.82□□□□□ -1.48
RFFL-202ENST00000394597 DEFB128Q7Z7B8 93 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms