RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 CRHR1P34998 444 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 SULT1E1P49888 294 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 RALGPS1Q5JS13 557 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 FBXO47Q5MNV8 452 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 TEDDM1Q5T9Z0 273 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 MBLAC2Q68D91 279 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 CAPRIN2Q6IMN6 1127 aaKnown RBP13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 PACS1Q6VY07 963 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 SLC26A9Q7LBE3 791 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 C10orf107Q8IVU9 208 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 SMC1BQ8NDV3 1235 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 AGR3Q8TD06 166 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 TFB1MQ8WVM0 346 aaKnown RBP13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 CCDC106Q9BWC9 280 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 YIPF3Q9GZM5 350 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 KRT82Q9NSB4 513 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 TMEM216Q9P0N5 145 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 UBQLN1Q9UMX0 589 aaKnown RBP13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 PLA2G4CQ9UP65 541 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 IPPQ9Y573 584 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 GOLGA8TH3BQL2 631 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 PGK1P00558 417 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 MYCNP04198 464 aaPredicted RBP13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 GNL1P36915 607 aaPredicted RBP13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 PTPN9P43378 593 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 TUBB3Q13509 450 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 TWF2Q6IBS0 349 aaKnown RBP13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 RIPOR1Q6ZS17 1223 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 EP400NLQ6ZTU2 488 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 PIGZQ86VD9 579 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 PLD6Q8N2A8 252 aaKnown RBP13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 ZFP42Q96MM3 310 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 OLFM3Q96PB7 478 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 PRDM12Q9H4Q4 367 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 CAB39LQ9H9S4 337 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 MEIS3P2A8K0S8 358 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 CTSHP09668 335 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 TPSB2P20231 275 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 BST2Q10589 180 aaKnown RBP13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 WASHC5Q12768 1159 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 PCLAFQ15004 111 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 TPSAB1Q15661 275 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 GNASQ5JWF2 1037 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 CXCL17Q6UXB2 119 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 LRRC74BQ6ZQY2 392 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 CRLF3Q8IUI8 442 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 ZNF567Q8N184 647 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 NME8Q8N427 588 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 LRRC52Q8N7C0 313 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 ANKRD52Q8NB46 1076 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 OR52K1Q8NGK4 314 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 PPP1R14CQ8TAE6 165 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 AGAP2Q99490 1192 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 GORASP1Q9BQQ3 440 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 SLC7A8Q9UHI5 535 aa13.85□□□□□ -0.19
GTF2F1-201ENST00000394456 A0A0A0MRY4 1105 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 A6NHS1 94 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 KPNA7A9QM74 516 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 NIPAL4Q0D2K0 466 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 LGSNQ5TDP6 509 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 KIAA0319Q5VV43 1072 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 ATG16L1Q676U5 607 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 TTC39CQ8N584 583 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 SMG8Q8ND04 991 aaKnown RBP13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 PGBD4Q96DM1 585 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 SPATA13Q96N96 652 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 ZFYVE28Q9HCC9 887 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 MAN1C1Q9NR34 630 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 ZFATQ9P243 1243 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 PACSIN3Q9UKS6 424 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 FZD10Q9ULW2 581 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 PIRO00625 290 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 NRP1O14786 923 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 AKR1A1P14550 325 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 CCR10P46092 362 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 AFF1P51825 1210 aaKnown RBP13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 CRYBB1P53674 252 aaPredicted RBP13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 MXRA7P84157 204 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 IRF9Q00978 393 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 ULK2Q8IYT8 1036 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 GSTCDQ8NEC7 633 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 SOCS4Q8WXH5 440 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 KATNAL1Q9BW62 490 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 BATF3Q9NR55 127 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 PIGVQ9NUD9 493 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 TMEM30AQ9NV96 361 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 PPM1HQ9ULR3 514 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 SDR42E2A6NKP2 422 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 PLIN3O60664 434 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 PDE5AO76074 875 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 IL1BP01584 269 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 AXLP30530 894 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 VHLP40337 213 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 SLC1A6P48664 564 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 SLC34A1Q06495 639 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 USP4Q13107 963 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 RNF139Q8WU17 664 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 WNT8BQ93098 351 aa13.84□□□□□ -0.19
GTF2F1-201ENST00000394456 FAM136AQ96C01 138 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms