RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 GYG1P46976 350 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 SCN1BQ07699 218 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 PCDH19Q8TAB3 1148 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 NEDD4LQ96PU5 975 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 IFNA16P05015 189 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 NME5P56597 212 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 IL18R1Q13478 541 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 ARHGAP15Q53QZ3 475 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 AGMOQ6ZNB7 445 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 PNKPQ96T60 521 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 ENTPD4Q9Y227 616 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 UHRF1BP1LA0JNW5 1464 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 PDXKO00764 312 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 MYL3P08590 195 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 RPL9P32969 192 aaKnown RBP13.67□□□□□ -0.22
USP49-203ENST00000394253 PIK3CBP42338 1070 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 SNRPFP62306 86 aaKnown RBP13.67□□□□□ -0.22
USP49-203ENST00000394253 SULT1C3Q6IMI6 304 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 WDR93Q6P2C0 686 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 AFTPHQ6ULP2 937 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 SFRP1Q8N474 314 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 ZNF276Q8N554 614 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 SYN2Q92777 582 aaPredicted RBP13.67□□□□□ -0.22
USP49-203ENST00000394253 SAMD4AQ9UPU9 718 aaKnown RBP13.67□□□□□ -0.22
USP49-203ENST00000394253 COL17A1Q9UMD9 1497 aaPredicted RBP13.67□□□□□ -0.22
USP49-203ENST00000394253 MYO7AQ13402 2215 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 NCF1BA6NI72 391 aaPredicted RBP13.67□□□□□ -0.22
USP49-203ENST00000394253 NCF1CA8MVU1 366 aaPredicted RBP13.67□□□□□ -0.22
USP49-203ENST00000394253 FOXN3O00409 490 aaPredicted RBP13.67□□□□□ -0.22
USP49-203ENST00000394253 PPM1BO75688 479 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 MSL3P1P0C860 447 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 NCF1P14598 390 aaPredicted RBP13.67□□□□□ -0.22
USP49-203ENST00000394253 RBP5P82980 135 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 NRF1Q16656 503 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 HLA-DQA1Q5Y7H0 255 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 NEK7Q8TDX7 302 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 KCNB2Q92953 911 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 ART5Q96L15 291 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 CHST12Q9NRB3 414 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 FSBPO95073 299 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 OGNP20774 298 aaKnown RBP13.67□□□□□ -0.22
USP49-203ENST00000394253 PIK3CGP48736 1102 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 OVGP1Q12889 678 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 WDR59Q6PJI9 974 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 NET1Q7Z628 596 aaPredicted RBP13.67□□□□□ -0.22
USP49-203ENST00000394253 PTCD2Q8WV60 388 aaKnown RBP13.67□□□□□ -0.22
USP49-203ENST00000394253 CFAP74Q9C0B2 1584 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 A0A1W2PQJ5 194 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 SLC16A4O15374 487 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 CHST10O43529 356 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 PDE8BO95263 885 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 C15orf59Q2T9L4 293 aaPredicted RBP13.67□□□□□ -0.22
USP49-203ENST00000394253 USP17L2Q6R6M4 530 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 CRELD2Q6UXH1 353 aaPredicted RBP13.67□□□□□ -0.22
USP49-203ENST00000394253 COA7Q96BR5 231 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 PTGFRNQ9P2B2 879 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 SORCS3Q9UPU3 1222 aa13.67□□□□□ -0.22
USP49-203ENST00000394253 KIAA0586Q9BVV6 1533 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 RSL1D1O76021 490 aaKnown RBP13.66□□□□□ -0.22
USP49-203ENST00000394253 OR5F1O95221 314 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 CCNE2O96020 404 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 ASNSP08243 561 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 DCKP27707 260 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 G2E3Q7L622 706 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 TRNAU1APQ9NX07 287 aaKnown RBP13.66□□□□□ -0.22
USP49-203ENST00000394253 SHROOM2Q13796 1616 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 CLUP10909 449 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 NEK3P51956 506 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 PRCCQ92733 491 aaPredicted RBP13.66□□□□□ -0.22
USP49-203ENST00000394253 SPTBP11277 2137 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 RNASEH1O60930 286 aaKnown RBP13.66□□□□□ -0.22
USP49-203ENST00000394253 CACNB3P54284 484 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 WDR72Q3MJ13 1102 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 ADAM33Q9BZ11 813 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 DPY30Q9C005 99 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 CRISPLD1Q9H336 500 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 SLC33A1O00400 549 aaPredicted RBP13.66□□□□□ -0.22
USP49-203ENST00000394253 PRRG1O14668 218 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 ALDH9A1P49189 494 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 MAZP56270 477 aaKnown RBP13.66□□□□□ -0.22
USP49-203ENST00000394253 SLC25A41Q8N5S1 370 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 SRFBP1Q8NEF9 429 aaKnown RBP13.66□□□□□ -0.22
USP49-203ENST00000394253 CPA5Q8WXQ8 436 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 SLITRK1Q96PX8 696 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 NT5C1AQ9BXI3 368 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 ACTR8Q9H981 624 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 TSPOAP1O95153 1857 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 A0A1W2PP64 1363 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 NCAM2O15394 837 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 CYP26A1O43174 497 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 FMO5P49326 533 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 USP46P62068 366 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 MTSS1LQ765P7 747 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 RASAL3Q86YV0 1011 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 ARMC8Q8IUR7 673 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 KLHL5Q96PQ7 755 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 BBS4Q96RK4 519 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 KPNA3O00505 521 aaPredicted RBP13.66□□□□□ -0.22
USP49-203ENST00000394253 CES2O00748 559 aa13.66□□□□□ -0.22
USP49-203ENST00000394253 ACSL4O60488 711 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms